EWM28360.1, cds2316 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|585110720|gb|EWM28360.1| (hypothetical protein Naga_100368g5 [Nannochloropsis gaditana]) HSP 1 Score: 851.277 bits (2198), Expect = 0.000e+0 Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0 Query: 1 MFLALKLLVVLGILSYGVATVLTSDHLTLAGFQAPLNHFLRGGRLYPATASKPSPSTSGTDPHHLPHHQPPDGGMNLLRRPWPWQVDSSVHTPPGALKALTRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDILLAAAARKEGRKGGRKREEAWEEAARKRRKKEREEEGGSLERQRECVAAIVEALRKSWEGGTSVDLKRRRQVHQGVGRGKKRRRCRVLSATAAEQGEGGTEEGFLRPPVFRAFFGREVSRMFEFAMWRSLRRK 418 MFLALKLLVVLGILSYGVATVLTSDHLTLAGFQAPLNHFLRGGRLYPATASKPSPSTSGTDPHHLPHHQPPDGGMNLLRRPWPWQVDSSVHTPPGALKALTRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDILLAAAARKEGRKGGRKREEAWEEAARKRRKKEREEEGGSLERQRECVAAIVEALRKSWEGGTSVDLKRRRQVHQGVGRGKKRRRCRVLSATAAEQGEGGTEEGFLRPPVFRAFFGREVSRMFEFAMWRSLRRK Sbjct: 1 MFLALKLLVVLGILSYGVATVLTSDHLTLAGFQAPLNHFLRGGRLYPATASKPSPSTSGTDPHHLPHHQPPDGGMNLLRRPWPWQVDSSVHTPPGALKALTRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDILLAAAARKEGRKGGRKREEAWEEAARKRRKKEREEEGGSLERQRECVAAIVEALRKSWEGGTSVDLKRRRQVHQGVGRGKKRRRCRVLSATAAEQGEGGTEEGFLRPPVFRAFFGREVSRMFEFAMWRSLRRK 418
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|553181963|ref|XP_005853654.1| (hypothetical protein NGA_0500300 [Nannochloropsis gaditana CCMP526] >gi|422295405|gb|EKU22704.1| hypothetical protein NGA_0500300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 649.818 bits (1675), Expect = 0.000e+0 Identity = 316/316 (100.00%), Postives = 316/316 (100.00%), Query Frame = 0 Query: 1 MFLALKLLVVLGILSYGVATVLTSDHLTLAGFQAPLNHFLRGGRLYPATASKPSPSTSGTDPHHLPHHQPPDGGMNLLRRPWPWQVDSSVHTPPGALKALTRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDILLAAAARKEGRKGGRKREEAWEEAARKRRKK 316 MFLALKLLVVLGILSYGVATVLTSDHLTLAGFQAPLNHFLRGGRLYPATASKPSPSTSGTDPHHLPHHQPPDGGMNLLRRPWPWQVDSSVHTPPGALKALTRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDILLAAAARKEGRKGGRKREEAWEEAARKRRKK Sbjct: 1 MFLALKLLVVLGILSYGVATVLTSDHLTLAGFQAPLNHFLRGGRLYPATASKPSPSTSGTDPHHLPHHQPPDGGMNLLRRPWPWQVDSSVHTPPGALKALTRRRQQPTGATTSFFEYWGDSKLITTVDGLRTRHGQGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDILLAAAARKEGRKGGRKREEAWEEAARKRRKK 316
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|1210521402|dbj|GAX19781.1| (hypothetical protein FisN_3Hh010 [Fistulifera solaris]) HSP 1 Score: 110.153 bits (274), Expect = 7.837e-24 Identity = 68/161 (42.24%), Postives = 91/161 (56.52%), Query Frame = 0 Query: 126 TVDGLRTRHG--QGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPD---ALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELA----EEGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFA 277 +VD LR G + S WGDL+ R +Y LLP+ LL+ + + + A DLA LA AR AA+LYARERS P RLAA LYDGFR +G++ GMSYE+VW KY + + E + EE A ++GQ +ILE++C TN+ D Sbjct: 54 SVDALRETFGGNRNSVWGDLDASSARLLYKSLLPKALLELHRYYSHQQGSSAATDLAPLAYQARVAAKLYARERSYWPYRLAASLYDGFRQYRKYGKFQTQGMSYEQVWEKYAAALDVEASRDCEEEVIAAKIGQ---------KILERACATNAMVDHLC 205
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|1210522023|dbj|GAX19076.1| (hypothetical protein FisN_3Lh010 [Fistulifera solaris]) HSP 1 Score: 108.227 bits (269), Expect = 3.975e-23 Identity = 66/161 (40.99%), Postives = 90/161 (55.90%), Query Frame = 0 Query: 126 TVDGLRTRHG--QGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPD---ALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGR----AGQVGQEELNRMVAFRILEKSCETNSGFDRFA 277 +VD LR G + S WGDL+ R +Y LLP+ LL+ + + + A DLA LA AR AA+LYARERS P RLAA LYDGFR +G++ GMSYE+VW KY + + E +++ A ++GQ +ILE++C TN D Sbjct: 54 SVDALRETFGGNRNSVWGDLDASSARLLYKSLLPKALLELHRYYSHQQGSSAATDLAPLAYQARVAAKLYARERSYWPYRLAASLYDGFRQYRKYGKFQTQGMSYEQVWEKYAAALDVEASQDCEEDVIAAKIGQ---------KILERACATNPVVDHLC 205
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|219114012|ref|XP_002176188.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402873|gb|EEC42841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 107.071 bits (266), Expect = 2.106e-22 Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 0 Query: 126 TVDGLRTRHG--QGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRA-GQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHD 284 +V+ LR G + FWGDL+ TR +Y LLP+ LL+ H + +DLA LA AR AA+LYARERS + LR+ + + DG R +G++ TGMSY +VW KY I ++ E+ + + +E++ + +ILE SC +N+ DR +H+ Sbjct: 90 SVEALRATFGVNRNGFWGDLDADRTRRLYKTLLPKALLE---LHAMGVQAQDLAPLAYRARVAAKLYARERSYVTLRIGSHMLDGIRTWQRYGQFDVTGMSYTQVWEKYAKAILEDADEDDESHAALREEDVTAQICLKILESSCRSNTMIDRLCLASGSHN 248
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|219126833|ref|XP_002183653.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404890|gb|EEC44835.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 108.612 bits (270), Expect = 3.957e-22 Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 0 Query: 126 TVDGLRTRHG--QGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRA-GQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHD 284 +V+ LR G + FWGDL+ TR +Y LLP+ LL+ H + +DLA LA AR AA+LYARERS + LR+ + + DG R +G++ TGMSY +VW KY I ++ E+ + + +E++ + +ILE SC +N+ DR +H+ Sbjct: 253 SVEALRATFGVNRNGFWGDLDADRTRRLYKTLLPKALLE---LHAMGVQAQDLAPLAYRARVAAKLYARERSYVTLRIGSHMLDGIRTWQRYGQFDVTGMSYTQVWEKYAKAILEDADEDNESHAALREEDVTAQICLKILESSCRSNTMIDRLCLASGSHN 411
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|219114010|ref|XP_002176187.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217402872|gb|EEC42840.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 108.227 bits (269), Expect = 5.953e-22 Identity = 61/162 (37.65%), Postives = 93/162 (57.41%), Query Frame = 0 Query: 126 TVDGLRTRHG--QGSFWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAEEGRA-GQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHD 284 +V+ LR G + FWGDL+ TR +Y LLP+ LL+ H + +DLA LA AR AA+LYARERS + LR+ + + DG R +G++ TGMSY +VW KY I ++ E+ + + +E++ + +ILE SC +N+ DR +H+ Sbjct: 267 SVEALRATFGVNRNGFWGDLDADRTRRLYKTLLPKALLE---LHAMGVQAQDLAPLAYRARVAAKLYARERSYVTLRIGSHMLDGIRTWQRYGQFDVTGMSYTQVWEKYAKAILEDADEDDESHAALREEDVTAQICLKILESSCRSNTMIDRLCLASGSHN 425
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|298706795|emb|CBJ29718.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 107.071 bits (266), Expect = 6.366e-22 Identity = 76/204 (37.25%), Postives = 97/204 (47.55%), Query Frame = 0 Query: 124 ITTVDGLRTRHG-QGSFWGDLNHVETRYVYHQLLPRHLLQDA---QAHPD------------------------------------ALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKELAE-EGRAGQVGQEELNRMVAFRILEKSCETNSGFDRFAQVERAHDIL 286 + +VD LR +G + FWGDL ETR YH+LLP + DA +A D A +E+ ARLAS ARHAARLY RER LP R+ A LYDG RHL G + TG ++ E+W KYE KI+ E EG E+L + RILEKSC T+ F+ + + L Sbjct: 139 LPSVDLLRQAYGPRRHFWGDLTPAETRRFYHELLPVSVYVDAVGAKAICDGNERPLGGGMSGGGLATVVDVANRQQGGHWEYFFGAAETLEERARLASMARHAARLYVRERCKLPSRVVAHLYDGLRHLKRHGSFRVTGETWPELWDKYERKIRSEDPSLEG-------EDLKTAICLRILEKSCSTSEMFNNLSGCSDLNSFL 335
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|224006201|ref|XP_002292061.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972580|gb|EED90912.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 107.842 bits (268), Expect = 1.357e-21 Identity = 68/180 (37.78%), Postives = 93/180 (51.67%), Query Frame = 0 Query: 125 TTVDGLRTRHGQGS--FWGDLNHVETRYVYHQLLPRHLLQDAQAHPDALA-VEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKYESKIQKE-----------------------LAEEG--RAGQVGQEELNRMVAFRILEKSCETNSGFDRF 276 T+V LR+ G+ WGD + TR +YH L+PR LL H L+ V++LA LA AR AA+ YARERS LP R+ + +YDGFR +G+W GM++E+VW KYE +I +E L EEG + E+L + RILE+S TN D+ Sbjct: 283 TSVSTLRSTFGKNKNRLWGDFDPATTRKLYHTLIPRALLA---LHDMGLSNVDELAPLAYQARVAAKKYARERSRLPGRIGSMMYDGFRQWRRYGKWETNGMTWEQVWRKYEDQILREAMMESGGSEGGNTGALEGFPGLDLEEEGMFENADLDDEQLTARICLRILERSVVTNEAIDKL 459
BLAST of EWM28360.1 vs. NCBI_GenBank
Match: gi|1072233739|gb|OEU18469.1| (hypothetical protein FRACYDRAFT_236745 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 96.2857 bits (238), Expect = 3.098e-18 Identity = 70/241 (29.05%), Postives = 108/241 (44.81%), Query Frame = 0 Query: 126 TVDGLRTRHG--QGSFWGDLNHVETRYVYHQLLPR---HLLQDAQAHPDALAVEDLARLASTARHAARLYARERSSLPLRLAAGLYDGFRHLSTFGRWSWTGMSYEEVWCKY--ESKIQKELAEEGRAGQVGQ--------------------EELNRMVAFRILEKSCETNSGFDRFAQVERAHDILLAAAARKEGRKGGRKREEAWEEAARKRRKKEREEEGGSLERQRECVAAIVEAL 339 T+DGLR G Q F+GDL+ TR +Y LLP L+ D P E+LA LA AR AA+LYARER +P R A YDG+R +GR+ GMSY++VW KY S +++ ++ ++ Q +++ +ILE SC TN D+ +R ++ ++ G++R+ + E + + +RE + I L Sbjct: 147 TLDGLRETFGSNQNKFFGDLDIPTTRKLYKSLLPTAVCELVLDVDVRP-----EELAPLAFEARKAAKLYARERCHVPARWLANFYDGYRQYKKYGRFQIEGMSYDQVWDKYYQRSTLERNTRKQKKSNTRTQHNDDDEDEDDEYEYDDGWTEQDIVAQTCMKILESSCRTNPLIDQLTLRKRGR-------RKQNNKRNGKRRKRISSIKIHMNDNSDEECDLMDDDEERENLEKIASTL 375 The following BLAST results are available for this feature:
BLAST of EWM28360.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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