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Properties
| Property Name | Value |
|---|
| Product | methyltransferase nsun6 |
| Orig transcript id | gnl|cribi|Naga_100264g3.10406.mrna |
| Orig protein id | gnl|cribi|Naga_100264g3.10406 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002459.1 | supercontig | CM002459.1:62218..64326 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2297 ID=rna2297|Name=rna2297|organism=Nannochloropsis gaditana|type=mRNA|length=2003bp
AGCATACGTCACTTCAACGTCACGCAATCGCGAGCACTGTCTTTGCCAGG
CTCATGCGCATATCATGTCTTCGCTCAGGTTTTACATGGCCATACATTTT
ATTAAATGCACTACATGTTGACTTGATCGGTAGCACCATGTCTTCTGTTC
CCTGCCTCCTTTGCGTCCGCCGGGCTCCTCAGTACGACCGGCAAAGCTGC
AACAGCGGAATCGGAGCAACAAGTGGCAGCAACGCGAAGAATAAGAGATG
TGACGACCAAAAAAGCAATAGCACACATAATTGGGGCCTATTTCTGACAG
ATGACGTGATAGAAGGGCAGATCGTATACCGAGGGAGCTACCAGCTTGTA
AATGCGTCTTCATTTAATTTCCCATCTATCATCGCGGTTGATGGACATTT
CTACCCCTATTCATATGACCGGCACACCACCCGCCTTCCCTCAATCGCTG
GATCGTCCAAATGGTGTTTTTTTCATCCTTCCCGCGGCGCTCTAATGAAT
CACTCATGCAGACCTTCAACGGTCATTAAAAAAGTCGATAACATAGAAGT
AGAAGGTACAGAAAAGACCAGAAAAAGCAGGAAAAGGAGGGGAAAGGACG
ACATAGGTGAAGCGATGGACGGAGAGTTCGATGAAGAGGAGGGGTCAGAC
AGGGAGCAGGACTCCTTTACCTACGACGTGGTTGCAGCTCGATCATTGCG
TAAAGGGGAGGAGGCTACATGTGATTATTTTCTAGCAGAATGGGAGGGCG
AGAAGGTTGGAAACTGTCCGCAGCCGTGTCTCTGCAGTGCAGGAGAGGGT
GTCTGCGGGGGTCTCCGGATGGGTTTTAAGCACCTTCCCTTTTCAGAGCA
GATTCTTCGTCTCCATGCCGTTGCAGACCATGTCTTTGAAGCTTTCGAAG
AGGAGAAAAGCTCAGATTTATGTGTGCTGGACGCTAGAGATGGTCTTCCT
CCTGGCATTTGCCTTTCCTTCAAGAGAGAGGAGGAGGAGGAGGAGGAGAA
GGGGAAGGAGGAGGAAGAGGAGAAAAAGAGAAAGGGAGGGAAGAAAAAGC
TGCCCAAAGAGACCCTCTACGTGAAGGGAGCTCAGGGGCCAAGAATCATC
GCGACGCGCGCCTTTTCTGCGGGCGAGACGCTATATCGTGCCTCCTCCTC
CTTCTTTTTCTTCCCTCCCCCCCGAATCTCCCCTCCCTTCCTTCCTTCCT
CCTCCCCTCCCTCGGCAGTTTTTGACCCTAGGCAGCCTTCGTCGTTGGCA
GCCGTAGAACCACAGATCGCACCAAGAAGATCCACAAGCCCATCTCCCCA
TTCCCACCCGCCGCCACCTGCCCTTCTGCTCGTGCTGGACGACTGCACCA
TTCCCTTGAGCCCCTACGAGCTGTACTCAACGTCCACGCCCGCCCCTCCT
TCTTTCCCTCCCTCCCTGGTGGCTTCTCTTGGGGAGGAAAGGAGCAGGAG
GGAAGTGTACGGATGGGACTGCTTGATGCGTCACCACTGTCGGCCGTCCA
CGCTCTGGATATGGGAGACCGGGGACGGCGGCCAAGGGGAGGGAGAGGGG
GGAAGGGAGGGAAAAGGGGGTTCAAAAAGCGGCAGTGGCCGGGTCCTACA
CGACAATGCCACGCGCTGCCTCCGTCTTGAGCACCGGACTGGAAGAGGAC
GGAGGGGAAAGATACACAGCGGGGTAAATATTCGACGGGGCTATCGCGTG
GTGGCTACCAAGGAGATAGGAGCGGGGGAGGAGTTGACGGTGGATTATCA
GGTACTGACACAACGTCATTTTCGAGGACAGCCCTGCCGCGGGATGGGAG
CCACACAGAGCTACCATCCTTCTGCAGGGGCCGTGGGCTTTCGCTGTGAA
TGCTCTGGGTGTGCTCGACCGGGAAAGGCTATTTATCGTTGAGAAGCAGG
CGGTGGACGGGAGGAAGAGCGACTGTAGGAGGTACCAATAGGATAGCAAC
TCTTCATGAAATGTGCACAAGCAATAATTAAAATTAAACATTTCTGTGAT
ATG back to topprotein sequence of rna2297 >rna2297-protein ID=rna2297-protein|Name=rna2297|organism=Nannochloropsis gaditana|type=polypeptide|length=552bp
MPSPHASHKNAPSVTIYNLPDYLPPVDEELHSRMMKHYGEEHWNRMRRAL
STSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQA
SYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVV
VDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYA
DYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGR
LFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVAC
DRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHP
VAVLAAAAENTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQ
DLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYS
ILQLVPAEPRLGAPGGGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDL
DVSGFFVAKFVKVASVFEGKDGEAKGTAWQDERNDRDSGWKRRGPQGEEE
EG back to topmRNA from alignment at CM002459.1:62218..64326+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2297 ID=rna2297|Name=rna2297|organism=Nannochloropsis gaditana|type=mRNA|length=2109bp|location=Sequence derived from alignment at CM002459.1:62218..64326+ (Nannochloropsis gaditana)
GGTGGCTGCTGACCTCAACTCATCATTCGTTTACAATTTCGTCCCATTTT
CGCAGGCGCCTATGCCATCTCCGCATGCGTCGCATAAGAATGCTCCGTCC
GTCACTATTTATAACCTACCTGATTACCTGCCTCCAGTCGACGAAGAACT
CCACTCTCGTATGATGAAGCATTACGGTGAAGAGCATTGGAATCGTATGC
GTCGGGCACTTTCTACCAGTCCATCTCATTCCTGTCTTCGTGTGAACACT
ATGAAAGCGGATACACAATCtgtgttggaggaggtaaCCACTTATGTGAA
CAATCATCGCAAGCAAAGCACCTGCACTGAGGAAAAGACAGCCCGAGACG
GAGAACAAGCCTCCTATCCCCCATCCAAGCCGTACTTGCACCCGATTCCG
CCACTCTCCTCTGACACCATCATCATCCCGCACGCGTCGTCCTTCAAacc
tccgcctctcttcAATCATTTCTCACCCGTACCCAACAAATTGAATCCTT
TCATCGTGGTCGTCGACCGCCTGTGCGGGGAAGCTGTGCTGCGTGGCGCC
GACGTCTTCGTGCGGGGCGTATGGAGCGCGAGTGCTGGCATCGCCTCGGG
CTCCCGCGTGCTCCTTCTTATGGACCTTCACCGACACTCCCAGCGAGGCT
GCCTGTACGCCGACTACCAAGGCGAGGCCATCTGCATCGGGCAAGGggtc
gccctcgtcccccgtGCGGAGCTCGTCACCGCCACCCACGGCCTGGGTAT
CCGGGTCACCCACCGCATGGGCCCTCAAGCCCCGCCCCTCAACGgtttcc
tccctggccgtctctttcctcaaaacctcccttccctcctcgtcgggcaC
GTCCTCGCGCCCTTGCCAGGCAGCACCGTCATCGACTTGTGCGCGTGCCC
GGGCGGGAAAGCCACGCACCTTGCCACGCTcatgcggggggagggcgtgg
tggtggcgtgCGACCGGAGCCGGAAAAAAATCAAGGCGCTGCAGGCGTtg
ggggaaagaatgggGCTGCTCCCTTGCTTGTGCCCCCTCGTCTTGGACAC
GAcccaccccgtccttcccccctccctccgggacCGGCGGCACCTGCCTT
CGTCTCACCCTGTGGCTGTGttggccgcggcggcggaaAACAccgacggc
ctccccctcgttcccgGTTTTTATCCCGAGACCttcgaccacgtcctcct
cgatcccCCCTGCTCTGCCTTGGGCCTCCGACCGcggttctccctccccg
tgcggGGCCAAGACTTGGACGCGTTCGTGGCGTTCCAACGGAAGTTTTGG
TGGGCGGCGGTGTTTTTGTTGCGAGTGGGGGGGAGCATGACCTATTCCAC
CTGTACCCTCAATCCTCAGGAAAACGAGGACATGGTTCGGTACGCCCTCG
ACACGTACTCGATCTTGCAACTGGTGCCGGCTGAGCCACGCCTGGGGGct
ccgggagggggaaaggctcTGTCGGAcgaagagaggggcaaggtacagct
tttcttgccgggggggggagggagggagggcggatgggaggaaggggaag
agggagacttGGACGTGAGTGGTTTCTTTGTCGCAAAATTTGTCAAAGTG
GCGAGTGTTTttgagggaaaggatggggaAGCTAAGGGGACAGCCTGGCA
AGACGAGCGGAATGACCGGGACAGtgggtggaagagaaggggtccccaag
gggaggaggaggaaggataaGCCGGAGGGTGGCCCAGCACCGGCCTCAAA
GCATGTAAACGTAGGTGAATTTTGCAATAAGAAAGTATGGAccaggagaa
agagagacaaaGGACAGAGCTatcacttcttcctccttcttctccctgcc
ctctccgTGATAAGCCTCCTGCGGCTACGGCAGCCCCTGCACGCTCATCT
GCTCAGCAGATTgatccatcctccccctcagaGCCAGCGGTGCAATTTTC
CAGCGTTCACAGTGTCGGGATTCCGCTGGACCCTGACTCCGACGATGCGA
AGACTCTGTCTGGGAGCCTTCCCTAATCCTCCCCCGAACATGACGATAAC
AGACAGAAAAAAATACCTGGAAACGCACAGGCACAAAGAATCGCCAAGGT
ATCTAACGG back to topCoding sequence (CDS) from alignment at CM002459.1:62218..64326+ >rna2297 ID=rna2297|Name=rna2297|organism=Nannochloropsis gaditana|type=CDS|length=1659bp|location=Sequence derived from alignment at CM002459.1:62218..64326+ (Nannochloropsis gaditana)
ATGCCATCTCCGCATGCGTCGCATAAGAATGCTCCGTCCGTCACTATTTA
TAACCTACCTGATTACCTGCCTCCAGTCGACGAAGAACTCCACTCTCGTA
TGATGAAGCATTACGGTGAAGAGCATTGGAATCGTATGCGTCGGGCACTT
TCTACCAGTCCATCTCATTCCTGTCTTCGTGTGAACACTATGAAAGCGGA
TACACAATCtgtgttggaggaggtaaCCACTTATGTGAACAATCATCGCA
AGCAAAGCACCTGCACTGAGGAAAAGACAGCCCGAGACGGAGAACAAGCC
TCCTATCCCCCATCCAAGCCGTACTTGCACCCGATTCCGCCACTCTCCTC
TGACACCATCATCATCCCGCACGCGTCGTCCTTCAAacctccgcctctct
tcAATCATTTCTCACCCGTACCCAACAAATTGAATCCTTTCATCGTGGTC
GTCGACCGCCTGTGCGGGGAAGCTGTGCTGCGTGGCGCCGACGTCTTCGT
GCGGGGCGTATGGAGCGCGAGTGCTGGCATCGCCTCGGGCTCCCGCGTGC
TCCTTCTTATGGACCTTCACCGACACTCCCAGCGAGGCTGCCTGTACGCC
GACTACCAAGGCGAGGCCATCTGCATCGGGCAAGGggtcgccctcgtccc
ccgtGCGGAGCTCGTCACCGCCACCCACGGCCTGGGTATCCGGGTCACCC
ACCGCATGGGCCCTCAAGCCCCGCCCCTCAACGgtttcctccctggccgt
ctctttcctcaaaacctcccttccctcctcgtcgggcaCGTCCTCGCGCC
CTTGCCAGGCAGCACCGTCATCGACTTGTGCGCGTGCCCGGGCGGGAAAG
CCACGCACCTTGCCACGCTcatgcggggggagggcgtggtggtggcgtgC
GACCGGAGCCGGAAAAAAATCAAGGCGCTGCAGGCGTtgggggaaagaat
gggGCTGCTCCCTTGCTTGTGCCCCCTCGTCTTGGACACGAcccaccccg
tccttcccccctccctccgggacCGGCGGCACCTGCCTTCGTCTCACCCT
GTGGCTGTGttggccgcggcggcggaaAACAccgacggcctccccctcgt
tcccgGTTTTTATCCCGAGACCttcgaccacgtcctcctcgatcccCCCT
GCTCTGCCTTGGGCCTCCGACCGcggttctccctccccgtgcggGGCCAA
GACTTGGACGCGTTCGTGGCGTTCCAACGGAAGTTTTGGTGGGCGGCGGT
GTTTTTGTTGCGAGTGGGGGGGAGCATGACCTATTCCACCTGTACCCTCA
ATCCTCAGGAAAACGAGGACATGGTTCGGTACGCCCTCGACACGTACTCG
ATCTTGCAACTGGTGCCGGCTGAGCCACGCCTGGGGGctccgggaggggg
aaaggctcTGTCGGAcgaagagaggggcaaggtacagcttttcttgccgg
gggggggagggagggagggcggatgggaggaaggggaagagggagacttG
GACGTGAGTGGTTTCTTTGTCGCAAAATTTGTCAAAGTGGCGAGTGTTTt
tgagggaaaggatggggaAGCTAAGGGGACAGCCTGGCAAGACGAGCGGA
ATGACCGGGACAGtgggtggaagagaaggggtccccaaggggaggaggag
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