EWM28387.1, cds2289 (CDS) Nannochloropsis gaditana

Overview
NameEWM28387.1
Unique Namecds2289
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:62279..63937 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28387.1
Productmethyltransferase nsun6
Orig transcript idgnl|cribi|Naga_100264g3.10406.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:62279..63937 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0003723RNA binding
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002478PUA
IPR015947PUA-like_domain
IPR001678MeTrfase_RsmB/NOP2
IPR029063SAM-dependent_MTases
IPR023267RCMT
Homology
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|585110765|gb|EWM28387.1| (methyltransferase nsun6 [Nannochloropsis gaditana])

HSP 1 Score: 1132.86 bits (2929), Expect = 0.000e+0
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0
Query:    1 MPSPHASHKNAPSVTIYNLPDYLPPVDEELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHPVAVLAAAAENTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPGGGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGKDGEAKGTAWQDERNDRDSGWKRRGPQGEEEEG 552
            MPSPHASHKNAPSVTIYNLPDYLPPVDEELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHPVAVLAAAAENTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPGGGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGKDGEAKGTAWQDERNDRDSGWKRRGPQGEEEEG
Sbjct:    1 MPSPHASHKNAPSVTIYNLPDYLPPVDEELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHPVAVLAAAAENTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPGGGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGKDGEAKGTAWQDERNDRDSGWKRRGPQGEEEEG 552          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|553180597|ref|XP_005853429.1| (hypothetical protein NGA_0447900, partial [Nannochloropsis gaditana CCMP526] >gi|422295632|gb|EKU22931.1| hypothetical protein NGA_0447900, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 596.275 bits (1536), Expect = 0.000e+0
Identity = 294/297 (98.99%), Postives = 295/297 (99.33%), Query Frame = 0
Query:   64 MKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHPVAVLAAAAEN 360
            MKADTQSVLEEVTTYVNNHRKQSTCTE KTA DGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHPVAVLAAAA+N
Sbjct:    1 MKADTQSVLEEVTTYVNNHRKQSTCTEGKTAIDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHPVAVLAAAAKN 297          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|553180600|ref|XP_005853430.1| (hypothetical protein NGA_0448000, partial [Nannochloropsis gaditana CCMP526] >gi|422295633|gb|EKU22932.1| hypothetical protein NGA_0448000, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 423.32 bits (1087), Expect = 2.087e-144
Identity = 205/207 (99.03%), Postives = 207/207 (100.00%), Query Frame = 0
Query:  346 PSSHPVAVLAAAAENTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPGGGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGKDGEAKGTAWQDERNDRDSGWKRRGPQGEEEEG 552
            PSSHPVAVLAAAA+NTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYS+LQLVPAEPRLGAPGGGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGKDGEAKGTAWQDERNDRDSGWKRRGPQGEEEEG
Sbjct:    1 PSSHPVAVLAAAAKNTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSVLQLVPAEPRLGAPGGGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGKDGEAKGTAWQDERNDRDSGWKRRGPQGEEEEG 207          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|1173951704|gb|OQR99521.1| (hypothetical protein THRCLA_06487 [Thraustotheca clavata])

HSP 1 Score: 347.821 bits (891), Expect = 1.200e-110
Identity = 202/521 (38.77%), Postives = 288/521 (55.28%), Query Frame = 0
Query:    8 HKNAPSVTIYNLPDYLPPVDEELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVN--NHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLS-SDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHPVAVLAAAAENTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPG-GGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGKDGEA 524
            +K +   T+  L D+       +       YG EHW+R+++AL+  P ++ +RVNT+  D ++++ ++   +   N R ++                   +P +  +P  S SD +++P AS            P+   L    ++VDRLCGEAVLRG+D+F RGV  AS+ +     V + +DL   + RG     + G  I I QG A + R+E+  A  GL I VT R+   APPLNG L G L+ QN PS +V HVL P PG T++D+CA PGGK +H+ATLM+ +G +VACDRSR+K+  +++  E MG L  + P+ LD+TH VLP     + ++ S   +   A  A+  + L  + GF  ETFD +LLDPPCSALGLRPR        +L+ + + QR F WAAVFLL+ GG + YSTCT+NP ENE MV +AL  Y  L+LVP  P LG  G   + LS ++   VQ F P               D+D  GFF AKF+K  S+   +D EA
Sbjct:   16 NKMSNEATLVTLDDFELKFPANVDECFNAAYGVEHWSRIKKALARPPGYTSVRVNTLVTDQKALVAKLNEALKPFNSRLEAA-----------------GRPAITALPHESLSDVVLVPSASRVN--------FPIQETLARKKIIVDRLCGEAVLRGSDIFARGVMCASSALNCDDEVAIFVDLDHSATRGSDAELHAGRKILIAQGKAQMSRSEMFRAMKGLAIAVTVRLCDDAPPLNGVLLGELYMQNTPSSVVAHVLNPQPGDTILDMCAAPGGKTSHIATLMQNKGTLVACDRSRRKVLEMKSYFESMG-LSIISPIKLDSTHSVLP----KQDNVISVQEIIAAAVKAQTNEKLLPIAGFCAETFDKILLDPPCSALGLRPRLLHACDMNELEQYCSMQRNFLWAAVFLLKPGGILVYSTCTVNPNENEKMVAHALKEYP-LELVPHTPVLGERGLTNQGLSADQAALVQRFDPS-------------SDIDTMGFFCAKFIKTKSI---RDVEA 489          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|570941856|gb|ETP07113.1| (hypothetical protein F441_16567 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 343.969 bits (881), Expect = 5.426e-109
Identity = 197/501 (39.32%), Postives = 281/501 (56.09%), Query Frame = 0
Query:   28 EELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFI--VVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDR--RHLPSSHPVAVLAAAAENTDG---LPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPG-GGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGK 520
            +++   +   YGE HW  ++RAL+  P+ + +RVNT+K   +  L+ +  +++    Q    +         AS  P + + H   P   D ++IP + S +             K NP +  +VVDRLCGEAVLRG+D+F RGV SASAGI +   V + +DL  +  RG  +A + G  + I +GV  + R E+  A  GL +    R+ P APP+NG + G+++ QNLP  +V HVL P  G  ++D+CA PGGK +H+ATLMR +G++VACDRS++K   L+ L E +  L C+ PL +D+TH +LP    D   +    ++   VLA A ++T     L  V GFYPETFD +LLDPPCSALGLRPR        +L  +   QR F W A FLL+ GG++ YSTCT+NP+ENE MV +AL  Y +  +   E  LG  G  G+ L+DEE   VQ F P               DLD  GFF AKF+K   + + +
Sbjct:   25 DQVEQELGDAYGEPHWTNIKRALARPPAFTAVRVNTLKLSLEEALQALKPHLDGFNTQLAALD---------ASRQPIEAFAHASLP---DVLMIPSSPSGQ----------TIVKYNPELKSIVVDRLCGEAVLRGSDIFARGVMSASAGINTEDEVNVFVDLDHNHTRGSDFATHNGRKLLIARGVTKMARTEIFRAVRGLAVTQLVRVCPDAPPMNGVMRGQIYVQNLPCSVVAHVLDPQEGDVILDMCAAPGGKTSHVATLMRNKGILVACDRSKRKALELRTLCEDLH-LDCVEPLKMDSTHALLPKDKVDTAPQSGDYTNVAQVLARAKQSTPSQARLLQVEGFYPETFDRILLDPPCSALGLRPRLLHAGDADNLAEYTNMQRNFLWVAAFLLKPGGTLVYSTCTINPKENEQMVHHALQNYPLKLVSQGEAHLGDRGLPGQGLTDEEASLVQRFDPAN------------TDLDTMGFFCAKFIKTGPIRQDQ 490          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|567980449|gb|ETL30912.1| (hypothetical protein L916_16162 [Phytophthora parasitica])

HSP 1 Score: 342.428 bits (877), Expect = 1.792e-108
Identity = 197/501 (39.32%), Postives = 280/501 (55.89%), Query Frame = 0
Query:   28 EELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFI--VVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDR--RHLPSSHPVAVLAAAAENTDG---LPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPG-GGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGK 520
            +++   +   YGE HW  ++RAL+  P+ + +RVNT+K   +  L+ +  +++    Q    +         AS  P + + H   P   D ++IP + S +             K NP +  +VVDRLCGEAVLRG+D+F RGV SASAGI +   V + +DL  +  RG  +A + G  + I +GV  + R E+  A  GL +    R+ P APP+NG + G+++ QNLP  +V HVL P  G  ++D+CA PGGK +H+ATLMR +G++VACDRS++K   L+ L E +  L C+ PL +D+TH +LP    D   +    ++   VLA A + T     L  V GFYPETFD +LLDPPCSALGLRPR        +L  +   QR F W A FLL+ GG++ YSTCT+NP+ENE MV +AL  Y +  +   E  LG  G  G+ L+DEE   VQ F P               DLD  GFF AKF+K   + + +
Sbjct:   25 DQVEQELGDAYGEPHWTNIKRALARPPAFTAVRVNTLKLSLEEALQALKPHLDGFNTQLAALD---------ASRQPIEAFAHASLP---DVLMIPSSPSGQ----------TIVKYNPELKSIVVDRLCGEAVLRGSDIFARGVMSASAGINTEDEVNVFVDLDHNHTRGSDFATHNGRKLLIARGVTKMARTEIFRAVRGLAVTQLVRVCPDAPPMNGVMRGQIYVQNLPCSVVAHVLDPQEGDVILDMCAAPGGKTSHVATLMRNKGILVACDRSKRKALELRTLCEDLH-LDCVEPLKMDSTHALLPKDKVDTAPQSGDYTNVAQVLARAKQITPSQARLLQVEGFYPETFDRILLDPPCSALGLRPRLLHAGDADNLAEYTNMQRNFLWVAAFLLKPGGTLVYSTCTINPKENEQMVHHALQNYPLKLVSQGEAHLGDRGLPGQGLTDEEASLVQRFDPAN------------TDLDTMGFFCAKFIKTGPIRQDQ 490          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|570318053|gb|ETO66001.1| (hypothetical protein F444_16745 [Phytophthora parasitica P1976])

HSP 1 Score: 342.428 bits (877), Expect = 1.871e-108
Identity = 196/499 (39.28%), Postives = 281/499 (56.31%), Query Frame = 0
Query:   28 EELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDR--RHLPSSHPVAVLAAAAENTDG---LPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPG-GGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGK 520
            +++   +   YGE HW  ++RAL+  P+ + +RVNT+K   +  L+ +  +++    Q    +         AS  P + + H   P   D ++IP + S +    +N     P   +   +VVDRLCGEAVLRG+D+F RGV SASAGI +   V + +DL  +  RG  +A + G  + I +GV  + R E+  A  GL +    R+ P APP+NG + G+++ QNLP  +V HVL P  G  ++D+CA PGGK +H+ATLMR +G++VACDRS++K   L+ L E +  L C+ PL +D+TH +LP    D   +    ++   VLA A ++T     L  V GFYPETFD +LLDPPCSALGLRPR        +L  +   QR F W A FLL+ GG++ YSTCT+NP+ENE MV +AL  Y +  +   E  LG  G  G+ L+DEE   VQ F P               DLD  GFF AKF+K   + + +
Sbjct:   25 DQVEQELGDAYGEPHWTNIKRALARPPAFTAVRVNTLKLSLEEALQALKPHLDGFNTQLAALD---------ASRQPIEAFAHASLP---DVLMIPSSPSGQTIVEYN-----PELKS---IVVDRLCGEAVLRGSDIFARGVMSASAGINTEDEVNVFVDLDHNHTRGSDFATHNGRKLLIARGVTKMARTEIFRAVRGLAVTQLVRVCPDAPPMNGVMRGQIYVQNLPCSVVAHVLDPQEGDVILDMCAAPGGKTSHVATLMRNKGILVACDRSKRKALELRTLCEDLH-LDCVEPLKMDSTHALLPKDKVDTAPQSGDYTNVAQVLARAKQSTPSQARLLQVEGFYPETFDRILLDPPCSALGLRPRLLHAGDADNLAEYTNMQRNFLWVAAFLLKPGGTLVYSTCTINPKENEQMVHHALQNYPLKLVSQGEAHLGDRGLPGQGLTDEEASLVQRFDPAN------------TDLDTMGFFCAKFIKTGPIRQDQ 490          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|567951773|gb|ETK77465.1| (hypothetical protein L915_16268 [Phytophthora parasitica])

HSP 1 Score: 342.043 bits (876), Expect = 2.612e-108
Identity = 197/501 (39.32%), Postives = 280/501 (55.89%), Query Frame = 0
Query:   28 EELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFI--VVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDR--RHLPSSHPVAVLAAAAENTDG---LPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPG-GGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGK 520
            +++   +   YGE HW  ++RAL+  P+ + +RVNT+K   +  L+ +  +++    Q    +         AS  P + + H   P   D ++IP + S +             K NP +  +VVDRLCGEAVLRG+D+F RGV SASAGI +   V + +DL  +  RG  +A + G  + I +GV  + R E+  A  GL +    R+ P APP+NG + G+++ QNLP  +V HVL P  G  ++D+CA PGGK +H+ATLMR +G++VACDRS++K   L+ L E +  L C+ PL +D+TH +LP    D   +    ++   VLA A + T     L  V GFYPETFD +LLDPPCSALGLRPR        +L  +   QR F W A FLL+ GG++ YSTCT+NP+ENE MV +AL  Y +  +   E  LG  G  G+ L+DEE   VQ F P               DLD  GFF AKF+K   + + +
Sbjct:   25 DQVEQELGDAYGEPHWTNIKRALARPPAFTAVRVNTLKLSLEEALQALKPHLDGFNTQLAALD---------ASRQPIEAFAHASLP---DVLMIPSSPSGQ----------TIVKYNPELKSIVVDRLCGEAVLRGSDIFARGVMSASAGINAEDEVNVFVDLDHNHTRGSDFATHNGRKLLIARGVTKMARTEIFRAVRGLAVTQLVRVCPDAPPMNGVMRGQIYVQNLPCSVVAHVLDPQEGDVILDMCAAPGGKTSHVATLMRNKGILVACDRSKRKALELRTLCEDLH-LDCVEPLKMDSTHALLPKDKVDTAPQSGDYTNVAQVLARAKQITPSQARLLQVEGFYPETFDRILLDPPCSALGLRPRLLHAGDADNLAEYTNMQRNFLWVAAFLLKPGGTLVYSTCTINPKENEQMVHHALQNYPLKLVSQGEAHLGDRGLPGQGLTDEEASLVQRFDPAN------------TDLDTMGFFCAKFIKTGPIRQDQ 490          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|570972245|gb|ETP35196.1| (hypothetical protein F442_16562 [Phytophthora parasitica P10297])

HSP 1 Score: 341.658 bits (875), Expect = 3.136e-108
Identity = 196/499 (39.28%), Postives = 281/499 (56.31%), Query Frame = 0
Query:   28 EELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDR--RHLPSSHPVAVLAAAAENTDG---LPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPG-GGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFEGK 520
            +++   +   YGE HW  ++RAL+  P+ + +RVNT+K   +  L+ +  +++    Q    +         AS  P + + H   P   D ++IP + S +    +N     P   +   +VVDRLCGEAVLRG+D+F RGV SASAGI +   V + +DL  +  RG  +A + G  + I +GV  + R E+  A  GL +    R+ P APP+NG + G+++ QNLP  +V HVL P  G  ++D+CA PGGK +H+ATLMR +G++VACDRS++K   L+ L E +  L C+ PL +D+TH +LP    D   +    ++   VLA A ++T     L  V GFYPETFD +LLDPPCSALGLRPR        +L  +   QR F W A FLL+ GG++ YSTCT+NP+ENE MV +AL  Y +  +   E  LG  G  G+ L+DEE   VQ F P               DLD  GFF AKF+K   + + +
Sbjct:   25 DQVEQELGDAYGEPHWTNIKRALARPPAFTAVRVNTLKLSLEEALQALKPHLDGFNAQLAALD---------ASRQPIEAFAHASLP---DVLMIPSSPSGQTIVEYN-----PELKS---IVVDRLCGEAVLRGSDIFARGVMSASAGINAEDEVNVFVDLDHNHTRGSDFATHNGRKLLIARGVTKMARTEIFRAVRGLAVTQLVRVCPDAPPMNGVMRGQIYVQNLPCSVVAHVLDPQEGDVILDMCAAPGGKTSHVATLMRNKGILVACDRSKRKALELRTLCEDLH-LDCVEPLKMDSTHALLPKDKVDTAPQSGDYTNVAQVLARAKQSTPSQARLLQVEGFYPETFDRILLDPPCSALGLRPRLLHAGDADNLAEYTNMQRNFLWVAAFLLKPGGTLVYSTCTINPKENEQMVHHALQNYPLKLVSQGEAHLGDRGLPGQGLTDEEASLVQRFDPAN------------TDLDTMGFFCAKFIKTGPIRQDQ 490          
BLAST of EWM28387.1 vs. NCBI_GenBank
Match: gi|673047103|ref|XP_008877512.1| (hypothetical protein H310_12287 [Aphanomyces invadans] >gi|574466926|gb|ETV93952.1| hypothetical protein H310_12287 [Aphanomyces invadans])

HSP 1 Score: 340.117 bits (871), Expect = 9.438e-108
Identity = 206/501 (41.12%), Postives = 278/501 (55.49%), Query Frame = 0
Query:   19 LPDYLPPVDEELHSRMMKHYGEEHWNRMRRALSTSPSHSCLRVNTMKADTQSVLEEVTTYVNNHRKQSTCTEEKTARDGEQASYPPSKPYLHPIPPLSSDTIIIPHASSFKPPPLFNHFSPVPNKLNPFIVVVDRLCGEAVLRGADVFVRGVWSASAGIASGSRVLLLMDLHRHSQRGCLYADYQGEAICIGQGVALVPRAELVTATHGLGIRVTHRMGPQAPPLNGFLPGRLFPQNLPSLLVGHVLAPLPGSTVIDLCACPGGKATHLATLMRGEGVVVACDRSRKKIKALQALGERMGLLPCLCPLVLDTTHPVLPPSLRDRRHLPSSHPVAVLAAAAENTDGLPLVPGFYPETFDHVLLDPPCSALGLRPRFSLPVRGQDLDAFVAFQRKFWWAAVFLLRVGGSMTYSTCTLNPQENEDMVRYALDTYSILQLVPAEPRLGAPG-GGKALSDEERGKVQLFLPGGGGREGGWEEGEEGDLDVSGFFVAKFVKVASVFE 518
            L ++     +++       YGE HW  ++ AL+  P+++ +RVNT+   TQS L      V N          +    G  A      P L       SD +I+P A      P  N   PV       I+V DRLCGEAVLRG+D+F RGV  AS+ + +G +VL+ +DL   + RG     + G  + +G G A +PR+E+  A  GL + V  R+   APPLNG LPG ++ QN PS +V HVL P PG TV+D+CA PGGK +HLATLM+  G +VACDRSR+K+  ++A  + +  L  + P+ LD+T  VLP     +  +PS   V + A   +    L  + GF  ETFD +LLDPPCSALGLRPR        +L+ +   QR F WAAVFLL+ GG++ YSTCT+NP+ENE MVR+ALD+Y  L+LV   P LG PG   + L+ ++  KVQ F P                 D  GFF AKFVK ASV E
Sbjct:   12 LDEFFLSFPDDVEEFFTSAYGEAHWGAIKGALARPPAYTSVRVNTL-VTTQSKL------VANLNAALVDFNARLHAQGRPAIVAEPHPTL-------SDVVIVPSA------PRVN--VPVDTATTKKIIV-DRLCGEAVLRGSDIFARGVMCASSALNAGDQVLVYVDLDHSATRGSDAELHAGRKVLLGSGTAAMPRSEMFRALKGLAVAVQSRLCADAPPLNGVLPGDMYMQNTPSSVVAHVLNPQPGDTVLDMCAAPGGKTSHLATLMQNRGTLVACDRSRRKVLEMKAFFDAVN-LSIIVPIKLDSTQSVLP----KQDIVPSVQQVILDARTKDPQAKLLPIAGFGAETFDKILLDPPCSALGLRPRLLHACNLSELEQYSNMQRNFLWAAVFLLKPGGTLVYSTCTVNPKENEQMVRHALDSYP-LELVAQSPVLGKPGLTNQGLTPDQAAKVQRFDPASPS-------------DTMGFFCAKFVKTASVRE 470          
The following BLAST results are available for this feature:
BLAST of EWM28387.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110765|gb|EWM28387.1|0.000e+0100.00methyltransferase nsun6 [Nannochloropsis gaditana][more]
gi|553180597|ref|XP_005853429.1|0.000e+098.99hypothetical protein NGA_0447900, partial [Nannoch... [more]
gi|553180600|ref|XP_005853430.1|2.087e-14499.03hypothetical protein NGA_0448000, partial [Nannoch... [more]
gi|1173951704|gb|OQR99521.1|1.200e-11038.77hypothetical protein THRCLA_06487 [Thraustotheca c... [more]
gi|570941856|gb|ETP07113.1|5.426e-10939.32hypothetical protein F441_16567 [Phytophthora para... [more]
gi|567980449|gb|ETL30912.1|1.792e-10839.32hypothetical protein L916_16162 [Phytophthora para... [more]
gi|570318053|gb|ETO66001.1|1.871e-10839.28hypothetical protein F444_16745 [Phytophthora para... [more]
gi|567951773|gb|ETK77465.1|2.612e-10839.32hypothetical protein L915_16268 [Phytophthora para... [more]
gi|570972245|gb|ETP35196.1|3.136e-10839.28hypothetical protein F442_16562 [Phytophthora para... [more]
gi|673047103|ref|XP_008877512.1|9.438e-10841.12hypothetical protein H310_12287 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2297rna2297Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications