rna2291, rna2291 (mRNA) Nannochloropsis gaditana

Overview
Namerna2291
Unique Namerna2291
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length580
Alignment locationCM002459.1:45233..46225 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100264g8.10405.mrna
Orig protein idgnl|cribi|Naga_100264g8.10405
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:45233..46225 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100264g8gene2189Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2291rna2291-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28386.1cds2283Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2291 ID=rna2291|Name=rna2291|organism=Nannochloropsis gaditana|type=mRNA|length=580bp
TTCCAGGCCACCGCACACTGGCGCGACCTGATGGGCATGCTCTTCGCGGC
CTCCGTGACTCTGCTCTTCAACGCCGCCATCGCCCACATGGTCAAGTTCC
CCTTGGAGGGCGCTGTCATCCTCCGCGAGTACACGAGCGGGGCCAACGCC
ATCGGCCCCTATATGGCTGCCAAATGCCTCGCGGACATCCCTTACGCCCT
TGGCCCTATTATCTTCTCGGTTGCATTGTATTGGACCGCAGGCCTCCTCT
CGAGCTGGTCCACCTTCTGGTGTTTCACGGCCGTGGCCGTCCTCATGGCT
CAGTCCGCCATGTCGATGGGGGTGGCTTTGGCCTGCTTCTCCCTCGACCC
CTCCATCGGCCTCACTCTCTTGCCGGTGTTGACGGCGCCCATGGTCATGT
TCTCGGGCCTGCTCTACGAGAGAGCTTCCGTGCCGCCGGCTTTGGCGTGG
ATGAGCTCTTTCTCGATCATCAATCATGGCTTTGCCCTTATGCTCTCCTT
GGAGGCACCTGCCTTGCCCTCCGGGCAGGGGGCCATCGTAAGGAAGGCGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
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protein sequence of rna2291

>rna2291-protein ID=rna2291-protein|Name=rna2291|organism=Nannochloropsis gaditana|type=polypeptide|length=201bp
MNLSEEMEGCSETRIELGEYKDGFENRQDHRVWEERALELPSTPSTREED
VGGGKHAAAEVEMEDAKGGREREDAVSARSIRSQRWQRHAVTTLEWTIEA
LKTSSSSSSYLSSSFAPSASSASIWQYTRRAIKYPFQCLAAKENERFGLK
TEAKGIDLEGGGIRKDRSKRRLGTRTTLLQGIAGKTQSGEFTAVMGPSGK
N
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mRNA from alignment at CM002459.1:45233..46225-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2291 ID=rna2291|Name=rna2291|organism=Nannochloropsis gaditana|type=mRNA|length=993bp|location=Sequence derived from alignment at CM002459.1:45233..46225- (Nannochloropsis gaditana)
ATGAATCTTTCAGAGGAAATGGAAGGGTGCTCAGAGACAAGAATAGAGTT
GGGTGAATACAAGGATGGGTTTGAAAATAGACAAGATCATAGAGTATGGG
AGGAGAGGGCGCTGGAACTACCATCAACACCCTCAACTCGGGAAGAAGAC
GTGGGGGGAGGGAAGCATGCGGCAGCGGAGGTCGAGATGGAGGATGCGAA
AGGAGGACGAGAGCGTGAGGATGCAGTATCTGCGAGGTCAATAAGGAGTC
AAAGATGGCAAAGACATGCCGTTACGGTATGGGAAGGAGAGGGCGGGGGG
CGGCGGAAAGGAGGGAACGAGGGAGGGTGGGTGGTAAGAAGGAAGGGAGG
AAGGAATACCTCTCCTGTGTCCCGATTACCCCTCTGTCCTTCACTCGGTT
AAATTCCTCTCGATTCTCTTACCCTGTTCCTTGCCATTCCGGTCCCTAGA
CGCTTGAATGGACGATTGAGGCTCTGAAGACTTCCTCCTCCTCCTCCTCC
TACCTCTCCTCCTCCTTCGCCCCCTCCGCATCCTCTGCGAGCATATGGCA
GTACACCCGCCGGGCCATAAAGTATCCGTTTCAGTGTCTGGCTGCCAAGG
AGAATGAGAGATTTGGCCTCAAGACGGAGGCGAAGGGAATCGACCTCGAG
GGGGGGGGTATACGGAAGGATAGGGTAAGTTGCGCTCTCTTTCTGCCTCT
TTTTTCTTCCAGACCACGCATCCTCTTTTCGCCTGCTTACTACGCCGTCG
TGCGCGCACTCTTTCTTTCTGTGCATGGCCGACCTGATTTTCCCTCCGAC
GTCTTCCTTGTCGCCCTTTCCTCCTGTTTCCTCTCCCCCGTCTTCCCCTC
CTTCTCTCCCTCCCTCGCGCCCTCCCTCCCTCCCTCAGTCGAAGCGGCGG
CTAGGAACGCGGACGACGTTGCTGCAAGGTATTGCGGGAAAGACACAGTC
GGGAGAGTTCACGGCCGTCATGGGTCCTAGTGGTAAGAACTGA
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Coding sequence (CDS) from alignment at CM002459.1:45233..46225-

>rna2291 ID=rna2291|Name=rna2291|organism=Nannochloropsis gaditana|type=CDS|length=1818bp|location=Sequence derived from alignment at CM002459.1:45233..46225- (Nannochloropsis gaditana)
TCGAAGCGGCGGCTAGGAACGCGGACGACGTTGCTGCAAGGTATTGCGGG
AAAGACACAGTCGGGAGAGTTCACGGCCGTCATGGGTCCTAGTGGTAAGA
ACTGAACGCTTGAATGGACGATTGAGGCTCTGAAGACTTCCTCCTCCTCC
TCCTCCTACCTCTCCTCCTCCTTCGCCCCCTCCGCATCCTCTGCGAGCAT
ATGGCAGTACACCCGCCGGGCCATAAAGTATCCGTTTCAGTGTCTGGCTG
CCAAGGAGAATGAGAGATTTGGCCTCAAGACGGAGGCGAAGGGAATCGAC
CTCGAGGGGGGGGGTATACGGAAGGATAGGATGAATCTTTCAGAGGAAAT
GGAAGGGTGCTCAGAGACAAGAATAGAGTTGGGTGAATACAAGGATGGGT
TTGAAAATAGACAAGATCATAGAGTATGGGAGGAGAGGGCGCTGGAACTA
CCATCAACACCCTCAACTCGGGAAGAAGACGTGGGGGGAGGGAAGCATGC
GGCAGCGGAGGTCGAGATGGAGGATGCGAAAGGAGGACGAGAGCGTGAGG
ATGCAGTATCTGCGAGGTCAATAAGGAGTCAAAGATGGCAAAGACATGCC
GTTACGTCGAAGCGGCGGCTAGGAACGCGGACGACGTTGCTGCAAGGTAT
TGCGGGAAAGACACAGTCGGGAGAGTTCACGGCCGTCATGGGTCCTAGTG
GTAAGAACTGAACGCTTGAATGGACGATTGAGGCTCTGAAGACTTCCTCC
TCCTCCTCCTCCTACCTCTCCTCCTCCTTCGCCCCCTCCGCATCCTCTGC
GAGCATATGGCAGTACACCCGCCGGGCCATAAAGTATCCGTTTCAGTGTC
TGGCTGCCAAGGAGAATGAGAGATTTGGCCTCAAGACGGAGGCGAAGGGA
ATCGACCTCGAGGGGGGGGGTATACGGAAGGATAGGATGAATCTTTCAGA
GGAAATGGAAGGGTGCTCAGAGACAAGAATAGAGTTGGGTGAATACAAGG
ATGGGTTTGAAAATAGACAAGATCATAGAGTATGGGAGGAGAGGGCGCTG
GAACTACCATCAACACCCTCAACTCGGGAAGAAGACGTGGGGGGAGGGAA
GCATGCGGCAGCGGAGGTCGAGATGGAGGATGCGAAAGGAGGACGAGAGC
GTGAGGATGCAGTATCTGCGAGGTCAATAAGGAGTCAAAGATGGCAAAGA
CATGCCGTTACGTCGAAGCGGCGGCTAGGAACGCGGACGACGTTGCTGCA
AGGTATTGCGGGAAAGACACAGTCGGGAGAGTTCACGGCCGTCATGGGTC
CTAGTGGTAAGAACTGAACGCTTGAATGGACGATTGAGGCTCTGAAGACT
TCCTCCTCCTCCTCCTCCTACCTCTCCTCCTCCTTCGCCCCCTCCGCATC
CTCTGCGAGCATATGGCAGTACACCCGCCGGGCCATAAAGTATCCGTTTC
AGTGTCTGGCTGCCAAGGAGAATGAGAGATTTGGCCTCAAGACGGAGGCG
AAGGGAATCGACCTCGAGGGGGGGGGTATACGGAAGGATAGGATGAATCT
TTCAGAGGAAATGGAAGGGTGCTCAGAGACAAGAATAGAGTTGGGTGAAT
ACAAGGATGGGTTTGAAAATAGACAAGATCATAGAGTATGGGAGGAGAGG
GCGCTGGAACTACCATCAACACCCTCAACTCGGGAAGAAGACGTGGGGGG
AGGGAAGCATGCGGCAGCGGAGGTCGAGATGGAGGATGCGAAAGGAGGAC
GAGAGCGTGAGGATGCAGTATCTGCGAGGTCAATAAGGAGTCAAAGATGG
CAAAGACATGCCGTTACG
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Synonyms
Publications