rna2289, rna2289 (mRNA) Nannochloropsis gaditana

Overview
Namerna2289
Unique Namerna2289
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length255
Alignment locationCM002459.1:40528..40797 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100369g1.2405.mrna
Orig protein idgnl|cribi|Naga_100369g1.2405
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:40528..40797 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100369g1gene2187Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2289rna2289-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28393.1cds2281Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2289 ID=rna2289|Name=rna2289|organism=Nannochloropsis gaditana|type=mRNA|length=255bp
ATGAAGGGAACGAACGGATTGAGCTTCAACACAACGCTTCGAGCGCCGGA
TGCATTCTTAAGACAACGAAGAGCACAGCACAAGATTAGAAACACCACGG
GGAAAAGCATGAATTCCACCGTCGGCGGACGTGAAAGCACATCGCAATCG
GAAGATCCTGTAACAACATGGACGTGGTGTTGGCATGACAAGGACAGTAC
AGGAGATCCCAAAGAAGGGAAAGGGCTTTTATTCGATGTTCCAGCACGTG
TGTAA
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protein sequence of rna2289

>rna2289-protein ID=rna2289-protein|Name=rna2289|organism=Nannochloropsis gaditana|type=polypeptide|length=72bp
MTPRTRFEPILSPYFSSSPPLIWKARSFAPSPGQGARAIEGRSRPRVRKK
GNDEFTRRFMRATRNLSRRERG
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mRNA from alignment at CM002459.1:40528..40797-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2289 ID=rna2289|Name=rna2289|organism=Nannochloropsis gaditana|type=mRNA|length=270bp|location=Sequence derived from alignment at CM002459.1:40528..40797- (Nannochloropsis gaditana)
ATGACTCCTCGGACGCGCTTCGAGCCCATTTTGTCGCCCTATTTCTCATC
CTCTCCGCCTCTTATTTGGTCGCCTATCTAGGTCTGAGCGTCCGGGCGCG
CTATTTCTCCTCTCTCTAGGAAGGCTCGGTCATTCGCCCCCTCTCCAGGG
CAAGGTGCAAGAGCGATAGAAGGGCGGAGCAGGCCCCGCGTCAGAAAGAA
GGGAAACGACGAGTTCACAAGACGATTCATGCGCGCGACCCGGAACTTGT
CGAGGCGTGAGAGAGGTTAG
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Coding sequence (CDS) from alignment at CM002459.1:40528..40797-

>rna2289 ID=rna2289|Name=rna2289|organism=Nannochloropsis gaditana|type=CDS|length=438bp|location=Sequence derived from alignment at CM002459.1:40528..40797- (Nannochloropsis gaditana)
GAAGGCTCGGTCATTCGCCCCCTCTCCAGGGCAAGGTGCAAGAGCGATAG
AAGGGCGGAGCAGGCCCCGCGTCAGAAAGAAGGGAAACGACGAGTTCACA
AGACGATTCATGCGCGCGACCCGGAACTTGTCGAGGCGTGAGAGAGGTTA
GATGACTCCTCGGACGCGCTTCGAGCCCATTTTGTCGCCCTATTTCTCAT
CCTCTCCGCCTCTTATTTGGAAGGCTCGGTCATTCGCCCCCTCTCCAGGG
CAAGGTGCAAGAGCGATAGAAGGGCGGAGCAGGCCCCGCGTCAGAAAGAA
GGGAAACGACGAGTTCACAAGACGATTCATGCGCGCGACCCGGAACTTGT
CGAGGCGTGAGAGAGGTTAGATGACTCCTCGGACGCGCTTCGAGCCCATT
TTGTCGCCCTATTTCTCATCCTCTCCGCCTCTTATTTG
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Synonyms
Publications