EWM28393.1, cds2281 (CDS) Nannochloropsis gaditana

Overview
NameEWM28393.1
Unique Namecds2281
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:40730..40797 -
Alignment locationCM002459.1:40528..40678 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28393.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100369g1.2405.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:40730..40797 -
CM002459.1supercontigCM002459.1:40528..40678 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM28393.1 vs. NCBI_GenBank
Match: gi|585110776|gb|EWM28393.1| (hypothetical protein Naga_100369g1 [Nannochloropsis gaditana])

HSP 1 Score: 141.739 bits (356), Expect = 8.996e-43
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 
Query:    1 MTPRTRFEPILSPYFSSSPPLIWKARSFAPSPGQGARAIEGRSRPRVRKKGNDEFTRRFMRATRNLSRRERG 72
            MTPRTRFEPILSPYFSSSPPLIWKARSFAPSPGQGARAIEGRSRPRVRKKGNDEFTRRFMRATRNLSRRERG
Sbjct:    1 MTPRTRFEPILSPYFSSSPPLIWKARSFAPSPGQGARAIEGRSRPRVRKKGNDEFTRRFMRATRNLSRRERG 72
The following BLAST results are available for this feature:
BLAST of EWM28393.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110776|gb|EWM28393.1|8.996e-43100.00hypothetical protein Naga_100369g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2289rna2289Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications