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Properties
| Property Name | Value |
|---|
| Product | gtp-binding nuclear protein ran |
| Orig transcript id | gnl|cribi|Naga_100100g13.8923.mrna |
| Orig protein id | gnl|cribi|Naga_100100g13.8923 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:574971..577561 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna227 ID=rna227|Name=rna227|organism=Nannochloropsis gaditana|type=mRNA|length=3535bp
CAACCTCAGGACATGGAGAGGGGAGAAACATGCCATATATGTAATGTTTA
CATCGGGAAAGTATCTCTACTTGTGCGAGGTGCGTTGACGTCTCCTCAAC
GACCTTGAAATATACATGGTTGATTCAAAAGATGCCTCCCGCCCCGATTT
CTTTCTCCTCAAAACGTTATGTTCACATTAGGGCCTGGCAGGTCGAAAGG
GATGGCGTTTGCCCTTAAGAAGCGTCGGACATGCAACGTCGACGATCGCG
TTGCTTCAGAAGCATGCGTGCTGGCATTTTCGACCCCACGCGTCTCGCGC
TGCCGCTTGGCTTGTCGAGGCAGGATGATGCTACTCTTTTTTGTCTTGGA
AGGCCTCGTTGCTCTCGGGGAGGCGAGCGTGCACCCGCTCTCCTTTATGC
GTGGGCCCGGTGTCAGGCCGGGAGTTCACCAGCCACGACCTTTGATACGC
CCCGTATACAAGAGAAAAGTCTTTGCACGTCCCGCTTTTTCAGAAAGCAG
GGACGAGAAAGTAGAATCCCCAGACCTCGAGTGTGTGGCAGAGGCCTTAC
CGCCATCTCCAGCTTTGAACGAGGCTGTGCCCGTTCAAAGTATTCGTCTC
AGAAAGCAGAAGACGGAGGTGACGCGCCGGAATCAACTTTTAACTGGAGG
ACTCCTGGCGGGGGCCGTGACGGCCACGCTGCTCAAAGTGCCTTCGACGA
GTCCTGCCTTCGCCGCCATGTCTACCCCGCTTTACGTCGACAAGGAAGTG
TGGGCGCCGTTGGAGGACTACATGCAGATGGATGGGAGAGAGCGGCAAAC
CACGTACTCTCCAAAGTTTACGGCGTATTTGGCCAGACTCCTGATCAACT
ACGACTACGCGAGCATGACGTGGTGGCAAAGGAAGACCCTTGTCGCACCA
AGAGAATCCTCTTTGCGTATCAATCGCATGCTGGCCACCAAAGGCTTCGA
CGCTACATTTCAAGAGCTGGACCTGGACGAGGATACCTTTCTGTCTCAAG
ATGAGCTGCGGTCGGCGCTGAGTGACCCGGACGCTCTGAACAAGAGAGAC
CGGGAGCTTCTTGCACAGCTCCAAGCATCGGTGAATTTCGGCCTTGTGCG
GTATCAAGGGAAAGAGGGAGTGGACCACCTTTGCCGCACATTGCGCTCTG
AATTTGGGGTCAACCGATTGGGAAAGCGGCAGTTGGCCTTGCTGTTCGCG
TTGATGGATAATTTACAGCCGGTGGAGGCGATCAAACAATTGATCGCGGA
GGCGGAGAACGCCTCTGTGGTCGGCTTCAATGTGACCTACCCGGGTTTTG
GCTATGATGCCGAGAACCCTCCCACAGTCAAAGTAGGCCCGTCGCCGGGG
GCAAACGTGTCGGCGGAGGCCCGCGTGAAACTGGCGCCAACGGGACGCAT
CCTGAAGGTGGTGCTCGAGACACCCATGTCCGGCTTCTCCACCCCGCCTA
AGCTAGAAATTAGCCCACCCATCGCTGACGATGGCGTGCGGGCTGCCTGT
ATCCCGAAAATGAACGGAGAGACGCTCGAGCGCATCGTCTTGTCGAACCC
CGGCAAGGGCTACACTGAGACGGACCGCGTTTCCGTGGTCGTGAACGTGG
AAGGGCAGCCTCTCCCATGGGTTTTGCGGTCGGCGCGACCACTGCTTGAG
ATGAAAGTGGCAGGGGTGGAGCTGATCAAGGGTAAAGGAGGGGAGGGGTA
TGCCCACGACCTGCCAATAAAGGTGGAGGTGAGCAAGCCGCCCTTCCCTG
TATCGGCGGTAGCCACAGCCAAGGCCTCTGCCATCCTAAGCGATCCGGAC
GAGCTCATTCTCCGGAGCTGGCTGCCACCGACCAACACCACGATCCCCGT
GACTGGGCTTCTGCCAAACAACCTTGTACCGAAATATGACCCCTGCCTGG
AGCGCTTTATCATCTCGCCAGTGGAGGAGCTGGATCCCAACTATTGCATT
TATTTCGAGGACGAGTTCAAAGTGGTGCCCTCCCAGAAATTTAGCAAGTA
TTTTTCGTTTTTAGACGGCCCCAAAGCCCGGGATCCGGTCGAGAAGGAAC
GAGAGCTCGACGCGGATGTCTTCTGGCGTTTTGCCCTCTGCGGGGCCTTG
TGCTGCAGCACGGCCCATGCACTTCTGGTGCCCCTGGATGTGGTCAAGAC
CAAGATGCAGGCTAGCCCGAGAAGGTATCCCTCTTTCGTACAGTCAACGA
AGCGTATCATCGACGAAGGCGGCCCGACTGCCCTGCTCTTAGGCGCTGGG
CCGACCGTGCTGGGGTATCTCGTCTACGGCGCCGTCACCTTTGGATTGAC
GGAGTATCTGAAGCGAGTCTTCCTGGACTTGGCGGGACCGGAGAATGCGA
CGTTTTACCCTTTTGCAATCTTATTGCTGGCCAGTATGTCGGCAGCTTTT
TTCGGTGCGGTGGCAGTCACTCCTTTCGAGGCCCTGCGGATCCGCTCTGT
CACGTCGTCGGAGGATGTAGCCGGAGGGGAGGACGAGATCGAGGGACCCT
CTTTCCGGCTGGAAAGCAATCAGAGTCCTACAGCATTGGAGGATTCAACC
AGCGTGGAAGAAGAATCGGACCCGGCGGCCTCCCCACCCGGCCCGACGGC
AGAAAAAGCTACCACCAGCGTTGAAGAAAGCTCAGGTGTGAAGCAGCCAG
TCTCCGTGCTGGCGTCAACCGGCGTAAACGGCATCCAGAGCAACGGTGCT
GGCCCCCAAAAGGCCATCGAACATGGCGAAGGCAGCGGCACAGGAGGTGC
CGGGGTGGCCGTGTTATCGGCGGAATCCCCGCCTGGGAATATGATGGCGA
CTGTGGGGCAGATGCTGAAGGAGGGCACTTTAGGTGAATTGTACGCGGGC
CTAGGTCCAGCGGTGGTTGGTGAAATCCCTTTCATGATGGCTAAGTTTGC
GGTGTTTGATGCTGTCTCAAAGGCCATCTACGCCGTTTACCCCTCTGCCT
CCGAATCCGTAGGGCTGTCTTTGGGCGTTTCCTTAGTGAGCGGGATGACC
GCGGGTGTGGCGGCCGCCGTTGTCTCACAGCCTTTCGACACTTTGACAAC
GAAAGTCACGCAATACACGCAGATGCGACGCTCTGGTGGCATCTTTGTTG
CGATTAAAGATGTTTACAGCAAAGGGAGCTTTGGAGGGTTTTTCAAAGGC
ACTTTTCCTCGTGCTGTCAAGTCCGCTGCTAACATTGCTCTCCAATTCTT
TCTCTACGATTTCTCGAAACGTGGCCTCCACGTATCTGCGGACGATCTAA
AATTATTTTTTGATGTCATGTCAGGTCTGGAACAAACGTAGTAGCGGAAT
AGCCTTAGGGATTTGCAAATTCTCCCTGGCGCCCGTATGTACATGGCCTG
CACATTCCTTCTGTCAGGACATTGACAGCTCTCGAGGAAGGGGAAACTTA
AGCAGCAGAAAGTGATGATCACTATGTAAAATTATAGTTGCAATGAATTA
TAAAGAAACATGGACGATGCTCTGTTAAGCAAAAGGATTGATACGTCCGC
GGAGGATTGATTTCTCTTATTTAAGTAGCAAAGGG back to topprotein sequence of rna227 >rna227-protein ID=rna227-protein|Name=rna227|organism=Nannochloropsis gaditana|type=polypeptide|length=213bp
MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFH
TNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPN
WHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKS
NYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTE
AAAMPLPDEDDDL back to topmRNA from alignment at CM002455.1:574971..577561- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna227 ID=rna227|Name=rna227|organism=Nannochloropsis gaditana|type=mRNA|length=2591bp|location=Sequence derived from alignment at CM002455.1:574971..577561- (Nannochloropsis gaditana)
CCAACACTCTCCAGCTCCTTCCGCTCCCTCCCACGCTTCACTAAGAACTC
GTCGGTTCATGGCACGTATGAGGGAATCGACATGCATTACCACTTAATTG
TCGTCAAGTATAGAGTTTTTGGAAGGGGGGGGGTCCCAGAAAGTGATTAA
GCAGATGGAGCTCGCTACCCTAGCGTAGGAAGTTCTCCCGTGGAGAGACT
ACAAAGAAGCTCTCATGATGACGCTGGGCTCGCTTTTAGGCCCCTGCGAC
GACGAATCATAAAGCCTGTGATGCCCTGGAATTCATGGCTCTCTGTACTT
TGGTTGTGGAGCCACACCTTGTGATATTGCTCGCAACGTGAATTGCTCCG
TTAGGTATCGTTACAAGCAGATGCTGTTAGCGAGGACCTAGAACCCTTCA
GTGGATGGAATCGAAATGGGAGACCATGATGCCCCGTCACGGACTCATTT
TCTTTACAATGCGGCTCATCTACTCGTTGAGAAGCTCCTGCTGACATAAA
GGCGCATTACTCATATGACCCTCCACATTTTGTAGGGTGTTTGAGCACGC
ACAACGCAAGCAGGCGCGGGAGCACCATCGGAGGGGACATGGTATGTACT
GAGACAGGCACGAGTTTGGAGGTGAATCAACTGCGTGCTTGGAGGCTTCA
ATGGACGGCATAATTGTGTTAAAGGAATTTACTACGTTGCACTGTTTGGA
AGATGTGCATGGGAATCCCGGATGGATGTGCATGTATGGAGAGAGGATGC
TGGTTCGAGTTCTTTCTCTTCTTGCGTTTTGGGATGATGCCGCGGGAGGC
TTGTTTTAATTTTCTAACGAAAAGGGGGATAATAGGGTCCGTGGCCTTCA
TGGACCTTGTGACGTAGCGCGTATGAACTCTGAACATGAATTTTCCTCTT
CCTCTCATCACACCACACGTGCAGACGGATTTCATTCCCGAATTCAAATT
GATTCTCGTCGGTGACGGTGGCGTAGGGAAAACCACTTTTGTACGACGAC
ACTTAACAGGGGAGTTTGAAAAGCGATATGTGGCGACTCTAGGGGTTGAA
GTCCACCCGCTCTTGTTCCACACAAACCGTGGCCAGATCAAATTTAATGT
TTGGGACACAGCCGGTCAGGAGAAATTTGGTGGACTCCGAGACGGTTACT
ATATCCAGGGACAATGCGCGATTATCATGTTCGACGTGACATCCCGTATC
ACCTACAAGAACGTTCCAAACTGGCACCGAGATCTGACCCGTGTCTGTGA
GAACATTCCCATCGTTCTCTGCGGGAACAAAGTGGAGATCAAGGTATGCA
CCACATCGATGCTGGACATGTCCTTGTCTTTCTTTTGTGGAAAGTGGTTT
TGGCTTTGCTGGCTCATTGTTGAGGGTTGATAAAACGAAAGAGGAGAGCG
GGCTCATGAGAAATCTGGCCTACACTTGGCTTTTTCCTCTCTAACTCATT
CGCAGGATCGAAAAGTCAAACCCAAGCAGATCATTTTCCACCGAAAGAAG
AACTTGCAGTACTATGATATCTCAGCCAAGAGCAATTACAATTTCGAGAA
GCCCTTCCTGTGGCTGGCGCGAAAGCTGACTGGGTAAGGCGTCGGCGTGG
GTCGGGAGAATCATCCCCGGAGGAGCTCATGTTGCGGCCCTCTTACGCTT
CTCTCACACTCATGTTTCCCTGGTTTGACCTTCCTTGTAGTGATAACAAT
TTGCACTTTGTCGAGGCACCGGCCTTGGCGCCGCCTGAGGTTGCCTACGA
TCAGAACGACATGGTTCGCTACGAGCAAGAACTCACAGAAGCTGCCGCCA
TGCCCTTACCCGATGTACGTGGGACCTCTTTTCTTCGAAAACCTGACAGT
AATTCCTGTACCTTGGTGTTCGGACATAACTTTCGGGCATGCTTTTTGTC
GAAAATTTTGTCTATGTTATGTTGGATTTTTGTCTGCATTGTTCCGCTAC
ACCTTTGCTTACTGCATGATCAATCCACCTGCAGGAGGACGACGACCTGT
AAAGCAAGAACGGTGACAGAAAAGCTCAAGAAATGTAGCGGTCACAATGC
AAATGCGGGCTGATCAGATGGTGGGAAAGCACCTGTACGGGTCGCGTATG
GCCATCTCCAGGCTCGAAGTGGTTGGTTCTTGACCGGGGTCTGGGTGTAG
ATGAAAGAAGCGAGAAGTTGCGGAAAGAAATAGGAGTAGGAAATTCTCAG
CATTCTTTTGCTGTCATGAAAGCGTATGCAATGGTAGCAGGTATACTGCG
TAGGGCTAAGACCCGATCGAGCGTTTGGTGAAGCCACAACTAGTACTACT
ACTGACGCGAAGCGAGCCCGCAAATGAAGCAACGAGATTCAATTAAAGCA
TCTTTCTCTTTTACAAGTTTCGATACATTTATTCTAAAACAATTATTTTG
GTACGCATTTGTGAGGTGTGATGTGTAATGGAAGTATAACAGGTTTAACG
GGCTCATGATTGTAGCTGCTACCAGTTCCGCATACTTGGCGGCGTCTTAG
AAGCTCTTAGGCATACAGAAACATGTGAATTCATATCAAATCTAAATTTG
TACTGTTTTCCTTACTTCGATTGTACCTTCGCATGTCCAAA back to topCoding sequence (CDS) from alignment at CM002455.1:574971..577561- >rna227 ID=rna227|Name=rna227|organism=Nannochloropsis gaditana|type=CDS|length=3210bp|location=Sequence derived from alignment at CM002455.1:574971..577561- (Nannochloropsis gaditana)
GAGGACGACGACCTGTAATGATAACAATTTGCACTTTGTCGAGGCACCGG
CCTTGGCGCCGCCTGAGGTTGCCTACGATCAGAACGACATGGTTCGCTAC
GAGCAAGAACTCACAGAAGCTGCCGCCATGCCCTTACCCGATGATCGAAA
AGTCAAACCCAAGCAGATCATTTTCCACCGAAAGAAGAACTTGCAGTACT
ATGATATCTCAGCCAAGAGCAATTACAATTTCGAGAAGCCCTTCCTGTGG
CTGGCGCGAAAGCTGACTGGACGGATTTCATTCCCGAATTCAAATTGATT
CTCGTCGGTGACGGTGGCGTAGGGAAAACCACTTTTGTACGACGACACTT
AACAGGGGAGTTTGAAAAGCGATATGTGGCGACTCTAGGGGTTGAAGTCC
ACCCGCTCTTGTTCCACACAAACCGTGGCCAGATCAAATTTAATGTTTGG
GACACAGCCGGTCAGGAGAAATTTGGTGGACTCCGAGACGGTTACTATAT
CCAGGGACAATGCGCGATTATCATGTTCGACGTGACATCCCGTATCACCT
ACAAGAACGTTCCAAACTGGCACCGAGATCTGACCCGTGTCTGTGAGAAC
ATTCCCATCGTTCTCTGCGGGAACAAAGTGGAGATCAAGATGGAGGACGA
CGACCTGTAATGATAACAATTTGCACTTTGTCGAGGCACCGGCCTTGGCG
CCGCCTGAGGTTGCCTACGATCAGAACGACATGGTTCGCTACGAGCAAGA
ACTCACAGAAGCTGCCGCCATGCCCTTACCCGATGATCGAAAAGTCAAAC
CCAAGCAGATCATTTTCCACCGAAAGAAGAACTTGCAGTACTATGATATC
TCAGCCAAGAGCAATTACAATTTCGAGAAGCCCTTCCTGTGGCTGGCGCG
AAAGCTGACTGGACGGATTTCATTCCCGAATTCAAATTGATTCTCGTCGG
TGACGGTGGCGTAGGGAAAACCACTTTTGTACGACGACACTTAACAGGGG
AGTTTGAAAAGCGATATGTGGCGACTCTAGGGGTTGAAGTCCACCCGCTC
TTGTTCCACACAAACCGTGGCCAGATCAAATTTAATGTTTGGGACACAGC
CGGTCAGGAGAAATTTGGTGGACTCCGAGACGGTTACTATATCCAGGGAC
AATGCGCGATTATCATGTTCGACGTGACATCCCGTATCACCTACAAGAAC
GTTCCAAACTGGCACCGAGATCTGACCCGTGTCTGTGAGAACATTCCCAT
CGTTCTCTGCGGGAACAAAGTGGAGATCAAGATGGAGGACGACGACCTGT
AATGATAACAATTTGCACTTTGTCGAGGCACCGGCCTTGGCGCCGCCTGA
GGTTGCCTACGATCAGAACGACATGGTTCGCTACGAGCAAGAACTCACAG
AAGCTGCCGCCATGCCCTTACCCGATGATCGAAAAGTCAAACCCAAGCAG
ATCATTTTCCACCGAAAGAAGAACTTGCAGTACTATGATATCTCAGCCAA
GAGCAATTACAATTTCGAGAAGCCCTTCCTGTGGCTGGCGCGAAAGCTGA
CTGGACGGATTTCATTCCCGAATTCAAATTGATTCTCGTCGGTGACGGTG
GCGTAGGGAAAACCACTTTTGTACGACGACACTTAACAGGGGAGTTTGAA
AAGCGATATGTGGCGACTCTAGGGGTTGAAGTCCACCCGCTCTTGTTCCA
CACAAACCGTGGCCAGATCAAATTTAATGTTTGGGACACAGCCGGTCAGG
AGAAATTTGGTGGACTCCGAGACGGTTACTATATCCAGGGACAATGCGCG
ATTATCATGTTCGACGTGACATCCCGTATCACCTACAAGAACGTTCCAAA
CTGGCACCGAGATCTGACCCGTGTCTGTGAGAACATTCCCATCGTTCTCT
GCGGGAACAAAGTGGAGATCAAGATGGAGGACGACGACCTGTAATGATAA
CAATTTGCACTTTGTCGAGGCACCGGCCTTGGCGCCGCCTGAGGTTGCCT
ACGATCAGAACGACATGGTTCGCTACGAGCAAGAACTCACAGAAGCTGCC
GCCATGCCCTTACCCGATGATCGAAAAGTCAAACCCAAGCAGATCATTTT
CCACCGAAAGAAGAACTTGCAGTACTATGATATCTCAGCCAAGAGCAATT
ACAATTTCGAGAAGCCCTTCCTGTGGCTGGCGCGAAAGCTGACTGGACGG
ATTTCATTCCCGAATTCAAATTGATTCTCGTCGGTGACGGTGGCGTAGGG
AAAACCACTTTTGTACGACGACACTTAACAGGGGAGTTTGAAAAGCGATA
TGTGGCGACTCTAGGGGTTGAAGTCCACCCGCTCTTGTTCCACACAAACC
GTGGCCAGATCAAATTTAATGTTTGGGACACAGCCGGTCAGGAGAAATTT
GGTGGACTCCGAGACGGTTACTATATCCAGGGACAATGCGCGATTATCAT
GTTCGACGTGACATCCCGTATCACCTACAAGAACGTTCCAAACTGGCACC
GAGATCTGACCCGTGTCTGTGAGAACATTCCCATCGTTCTCTGCGGGAAC
AAAGTGGAGATCAAGATGGAGGACGACGACCTGTAATGATAACAATTTGC
ACTTTGTCGAGGCACCGGCCTTGGCGCCGCCTGAGGTTGCCTACGATCAG
AACGACATGGTTCGCTACGAGCAAGAACTCACAGAAGCTGCCGCCATGCC
CTTACCCGATGATCGAAAAGTCAAACCCAAGCAGATCATTTTCCACCGAA
AGAAGAACTTGCAGTACTATGATATCTCAGCCAAGAGCAATTACAATTTC
GAGAAGCCCTTCCTGTGGCTGGCGCGAAAGCTGACTGGACGGATTTCATT
CCCGAATTCAAATTGATTCTCGTCGGTGACGGTGGCGTAGGGAAAACCAC
TTTTGTACGACGACACTTAACAGGGGAGTTTGAAAAGCGATATGTGGCGA
CTCTAGGGGTTGAAGTCCACCCGCTCTTGTTCCACACAAACCGTGGCCAG
ATCAAATTTAATGTTTGGGACACAGCCGGTCAGGAGAAATTTGGTGGACT
CCGAGACGGTTACTATATCCAGGGACAATGCGCGATTATCATGTTCGACG
TGACATCCCGTATCACCTACAAGAACGTTCCAAACTGGCACCGAGATCTG
ACCCGTGTCTGTGAGAACATTCCCATCGTTCTCTGCGGGAACAAAGTGGA
GATCAAGATG back to top
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