EWM30455.1, cds227 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|585113118|gb|EWM30455.1| (gtp-binding nuclear protein ran [Nannochloropsis gaditana]) HSP 1 Score: 446.817 bits (1148), Expect = 5.541e-159 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL
Sbjct: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|676381173|ref|XP_009033865.1| (GTP-binding nuclear protein Ran [Aureococcus anophagefferens] >gi|323455637|gb|EGB11505.1| GTP-binding nuclear protein Ran [Aureococcus anophagefferens]) HSP 1 Score: 390.963 bits (1003), Expect = 5.442e-137 Identity = 187/209 (89.47%), Postives = 195/209 (93.30%), Query Frame = 0
Query: 5 IPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
+PEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPL+FHTNRG IKFNVWDTAGQE+FGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL GDNNLHFVEAPALAPPE D D RYEQEL EAA +PLP++DDDL
Sbjct: 3 MPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQERFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLCGDNNLHFVEAPALAPPEFNIDPVDAQRYEQELREAANIPLPEDDDDL 211
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|1210518317|dbj|GAX22929.1| (GTP-binding nuclear protein Ran [Fistulifera solaris]) HSP 1 Score: 383.259 bits (983), Expect = 6.773e-134 Identity = 182/207 (87.92%), Postives = 188/207 (90.82%), Query Frame = 0
Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLP 207
M IPEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPLLFHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+GDN LHFVEAPAL PPE D + YEQE+ +AAA PLP
Sbjct: 1 MATEIPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLLFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNQLHFVEAPALQPPEATIDDATKILYEQEIADAAAQPLP 207
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|1072234591|gb|OEU19320.1| (ras-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 383.259 bits (983), Expect = 9.033e-134 Identity = 182/203 (89.66%), Postives = 189/203 (93.10%), Query Frame = 0
Query: 6 PEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPD 208
PEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+GDN LHFVEAPAL PPE +D+N +YEQEL AAA PLP+
Sbjct: 7 PEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLNFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNALHFVEAPALQPPEFQFDENLKNQYEQELQAAAAQPLPE 209
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|1210523393|dbj|GAX17717.1| (GTP-binding nuclear protein Ran [Fistulifera solaris]) HSP 1 Score: 382.104 bits (980), Expect = 2.437e-133 Identity = 180/203 (88.67%), Postives = 187/203 (92.12%), Query Frame = 0
Query: 5 IPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLP 207
+PEFKLILVGDGGVGKTTFV+RHLTGEFEK+YVATLGVEVHPLLFHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVL GNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLARKL+GDN LHFVEAPAL PPE D + YEQE+ +AAA PLP
Sbjct: 4 VPEFKLILVGDGGVGKTTFVKRHLTGEFEKKYVATLGVEVHPLLFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLTGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLSGDNQLHFVEAPALQPPEATIDDATKILYEQEIADAAAQPLP 206
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|298714901|emb|CBJ27657.1| (RAN, Ras superfamily GTPase [Ectocarpus siliculosus]) HSP 1 Score: 381.719 bits (979), Expect = 3.002e-133 Identity = 180/213 (84.51%), Postives = 193/213 (90.61%), Query Frame = 0
Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
M +PEFKLILVGDGGVGKTTFV+RH+TGEFEK+YVATLGVEV PL FHTNRG IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCE+IPIVLCGNKVEIKDRKVK KQI FHRKKNLQYYDISAKSNYNFEKPFLWLA+KL GD NL FVE PAL PPE +Q D ++++QE+ AAA+PLPDEDDDL
Sbjct: 1 MAQEMPEFKLILVGDGGVGKTTFVKRHVTGEFEKKYVATLGVEVRPLPFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCEHIPIVLCGNKVEIKDRKVKAKQITFHRKKNLQYYDISAKSNYNFEKPFLWLAKKLVGDANLQFVEQPALQPPEFVINQADQLKFQQEIDAAAAVPLPDEDDDL 213
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|1183471655|gb|ORY95544.1| (P-loop containing nucleoside triphosphate hydrolase protein [Syncephalastrum racemosum]) HSP 1 Score: 379.407 bits (973), Expect = 2.493e-132 Identity = 178/213 (83.57%), Postives = 188/213 (88.26%), Query Frame = 0
Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
M D IP FKL+LVGDGG GKTTFV+RHLTGEFEK+YVATLGVEVHPL FHTN GQI FN WDTAGQEKFGGLRDGYYIQGQCA+IMFDVTSRITYKNVPNWHRDL RVCENIPIVLCGNKV+IK+RKVK K I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL G+ NL FV APALAPPEV D N M +Y E+ EAAA PLP+EDDDL
Sbjct: 1 MADQIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLTFHTNFGQIVFNTWDTAGQEKFGGLRDGYYIQGQCAVIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDIKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGNANLEFVSAPALAPPEVQVDSNLMEQYRSEMAEAAAQPLPEEDDDL 213
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|671693100|emb|CDS07831.1| (Putative GTP-binding nuclear protein GSP1/Ran [Lichtheimia ramosa]) HSP 1 Score: 376.711 bits (966), Expect = 3.038e-131 Identity = 177/213 (83.10%), Postives = 189/213 (88.73%), Query Frame = 0
Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
M++ P FKL+LVGDGG GKTTFV+RHLTGEFEK+YVATLGVEVHPL FHTN GQI FN WDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDL RVCENIPIVLCGNKV+IK+RKVK K I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL G+ L FV APALAPPEV D N M +Y+QE+ EAAA PLP+EDDDL
Sbjct: 1 MSEQTPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLTFHTNFGQIVFNTWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDIKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGNPQLEFVAAPALAPPEVQVDNNLMQQYQQEMNEAAAQPLPEEDDDL 213
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|1183485144|gb|ORZ08890.1| (P-loop containing nucleoside triphosphate hydrolase protein [Absidia repens]) HSP 1 Score: 374.785 bits (961), Expect = 2.003e-130 Identity = 175/213 (82.16%), Postives = 187/213 (87.79%), Query Frame = 0
Query: 1 MTDFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
M P FKL+LVGDGG GKTTFV+RHLTGEFEK+Y+ATLGVEVHPL FHTN G + FN WDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDL RVCENIPIVLCGNKV+IK+RKVK K I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL G+ +L FV APALAPPEVA D N M +Y QE+ EAAA PLP+EDDDL
Sbjct: 1 MATETPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLTFHTNFGNLIFNTWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLVRVCENIPIVLCGNKVDIKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGNTSLEFVAAPALAPPEVAVDANLMSQYTQEMNEAAAQPLPEEDDDL 213
BLAST of EWM30455.1 vs. NCBI_GenBank
Match: gi|541040834|gb|ERG80224.1| (gtp-binding nuclear protein ran [Ascaris suum]) HSP 1 Score: 374.4 bits (960), Expect = 2.355e-130 Identity = 174/211 (82.46%), Postives = 189/211 (89.57%), Query Frame = 0
Query: 3 DFIPEFKLILVGDGGVGKTTFVRRHLTGEFEKRYVATLGVEVHPLLFHTNRGQIKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRITYKNVPNWHRDLTRVCENIPIVLCGNKVEIKDRKVKPKQIIFHRKKNLQYYDISAKSNYNFEKPFLWLARKLTGDNNLHFVEAPALAPPEVAYDQNDMVRYEQELTEAAAMPLPDEDDDL 213
D IP FKL+LVGDGG GKTTFV+RHLTGEFEK+YVATLGVEVHPL+FHTNRGQI+FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVT+R+TYKNVPNWHRDL RVCENIPIVLCGNKV++KDRKVK K I FHRKKNLQYYDISAKSNYNFEKPFLWLARKL GD NL FV PALAPPEV D + +YEQE+ AA+ LP++DDDL
Sbjct: 6 DGIPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLIFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLVRVCENIPIVLCGNKVDVKDRKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGDPNLEFVAMPALAPPEVQMDPTMVAQYEQEIAAAASAELPEDDDDL 216 The following BLAST results are available for this feature:
BLAST of EWM30455.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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