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Properties
| Property Name | Value |
|---|
| Product | kif6 type kinesin-like protein |
| Orig transcript id | gnl|cribi|Naga_100166g4.1620.mrna |
| Orig protein id | gnl|cribi|Naga_100166g4.1620 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1298550..1300788 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2258 ID=rna2258|Name=rna2258|organism=Nannochloropsis gaditana|type=mRNA|length=1875bp
TCGTCCCGCTTTTGCCTATCGTCATCACGTAGCCTTATCGACTCTTCTTT
CTTGTCATCTCATTCTCTATGCAGGCGGCTTCTATCTATAGCCATATGAC
ACATGGTAGCGATATCTCGTAGAAACCGATGGCATCCTCGGCATGGGGGG
TTTATTCGAAAATTACCGCATAATCTTTTGACTTTGGGAAAGTGCATCGT
CTGTATTTCGGCTCTTTTATGGCTGCTTGGTCGTCCGCTGGGTCGGAATT
CACCCCAAGAGCTGGCTCGGGAGCTAGAAGAGGTAAAGAAAAGACGGCAG
GCAAGCACGTTGGACCCCAAATTGAAGACAGGACTCATGAAGTGGTGACA
TAAACGGAGAAAATCGCTGAACGTGATGGTCTGTTACGATTAAAACAGGA
AGCAGGACATTAAAATGCTTCTGTGCCGATGCCAGCTTATGCTTTTCCCT
GTTTCTTCCCCTCTCTTCAGAAGGACACTCCTGCACTCCAACACCCGCCC
CAGACCAGAATCATCACAGAGAAGGAGCTTTGGGAAGAAGCATCAAAAGC
TTATCATCGCGGATTACAAGCTGGTAGAGAAGAATCCAGAAACAAAAACC
ATACCAGGGAAAGTACGGCAAATAGCCAAGTTGACGGCGTTGACAAAAGC
TTATCGTCGGTGGATGCGGTCCCCCGAAAGACAGCCGATCCGAATAGCTC
CTCTTCTGACCCGTCGCATTCTCCTTGCTCGTCCGTCCCTCTACGAGAGC
CTTGTCCGTCTTATCCTGCCATTCCCTCTTCCAAGCCTCATCTTGGCCGA
CGCCGTCCTGGTGAATGCGTGGGCCCCCGGGGGAGCGTCTGGGATGAACG
AGGTTTCAATTATTTTCCCAACCGGGATATGTTTTTTCCTTACGAAGAGG
AAGACTCCAGCTTCCGGAGTCTCGTCATCTTCACAGCGGGAAGAAGCGCG
ATGGAAAATATCGACAACCTGGTGCGGTCGTGGGGTTTTGAGCATTTTGA
CTACGTCTTGATGCATTATGACGATTCCTCCTCGGAGTGGAACAGGTTCG
ACTGGTATAAGCACGCAGTAGCCATCACGGGGCAGCAGCAGGCAAAGTTT
TGGTTCTATAAGCGCTTTGCCACGCCGTGGTTGGTTAGGGGCTACAGATA
CGTGCACTTTGTCGACTCGGATGCCGGCTCCCCACCCTCCCGCCCTTTCA
ATCTGACCCAATACGAGAACTTCCTCTCCGACCACGGCCTTCTCATAGCT
CAACCTGCCATAATTAAGGCTGGGCGCTCCAGCGACCACGATGTCTGCCG
AGAGCACAACGACACGCTCTATCGTGTCACCAGCGTGGTGGAAAATGGGC
CGCTCTACTCGGTCTCGCAGGAGGCCTACGCCTGCTACTGGGAGATGATA
GATGCAGATGCTGTGAGTGGTTGGGGGCCAGACGCTTGCTGGTGCCAGTA
CCTACATGAAGTTTGTGGATATCCTGTTGAAAGCGTCTGCAGCGTCATCG
ACGTGTTCCCGATTGAGCATTTGAACGGGAAAACTGCGAGCGAATCGTCG
TATCGGGGCAAGAAATACTATGAGTATGGCTTCAAAGAATGGGAACGGTA
CGGGAAGCGGATGGACAAGCTTCTTCGAAGCCCTTTTCAAAGGAGTGCAG
CCCAGTTCCGCACGTTTAGATCTTTGCCTTTGCCCGCAGAGAGGTGGGTA
GACGGGGTGTCAAAGCCCGTTATCGACGTAAGAGAAAGAAGGAAGATGCA
AGAGGAGGCGAGGCGGGCGAAAGATGCGCGCTTGTTGGCGCAAACTCGGA
AGCAAGCAATAAGAAGATCTTAGAGGAATGAGGTGATAGTACCCTAAAAA
CCAAAAAATAATATTCGTAAACGTG back to topprotein sequence of rna2258 >rna2258-protein ID=rna2258-protein|Name=rna2258|organism=Nannochloropsis gaditana|type=polypeptide|length=369bp
MPSPRPPRHRRPSSVRNIIDYPSSPAKSPQGVSCRAARSSLSVGETSSQA
FKSKLSTHQNALKDEQKESRRERLKDSETEHENHAEQKQPGKRMTWRVET
FCRYVLVNRSIKVRAFTHTHQYIIPYNSVKPHLTPSSPPAKCLRSIPYEL
RQGQGPLGSDPPYRSLRIGCAESSAGALLWNTRRQEIDFDFTEVFPPAVA
QAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLI
PRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWT
KVSPRLHHSLTSPTPRFFPAFVPKWIRVLNNPSIPPLLFPLLLALQGTDD
GRRRRRNAPPAPKALRSCI back to topmRNA from alignment at CM002458.1:1298550..1300788+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2258 ID=rna2258|Name=rna2258|organism=Nannochloropsis gaditana|type=mRNA|length=2239bp|location=Sequence derived from alignment at CM002458.1:1298550..1300788+ (Nannochloropsis gaditana)
AGGTCGTTCATTTTTAAAATGCCGTCACCAAGACCTCCTCGACATCGGCG
TCCTTCTTCTGTTAGAAACATTATCGACTATCCATCTAGCCCCGCAAAAT
CACCACAAGGCGTGAGCTGTCGTGCAGCACGCTCATCTCTGTCGGTAGGC
GAGACCTCCTCGCAGGCTTTCAAGTCCAAACTGTCTACACATCAAAATGC
CCTCAAGGATGAGCAGAAAGAAAGCAGAAGAGAACGGCTGAAAGACAGCG
AGACGGAGCACGAGAATCATGCAGAGCAAAAGCAGCCGGGCAAAAGAATG
ACCTGGCGTGTAGAAACGTTTTGTCGGTATGTACTTGTCAATAGATCTAT
CAAGGTCAGAGCCTTTACACACACACACCAATATATCATCCCCTACAATA
GTGTCAAGCCCCACTTAacgccatcttcccccccggctaAGTGTCTACGG
TCGATCCCATACGAGCTACGACAGGGACAGGGCCGTACGTATATTCATTA
CTGGAGGGGGCTGGTCCGAGATAGAATAGCGAATCACGGTGTACACATTT
CTTTGTCGTCATACTTTTCttatgctttcctccctctagCGCTTGGTAGC
GATCCTCCGTACAGAAGCCTGCGTATAGGATGTGCCGAAAGCAGCGCAGG
TGCATTATTATGGAATACTCGCCGACAAGAGATAGATTTCGATTTCACAG
AGGTAAGCGACCATCGAATATATTCTAACAAGGGTCTTATACTGCACAAA
ATTTTACACGTTGAAGAGGGGTTGGTCTGCATCTTGGTACCACTCCTTCG
TATCTTGTCTTTTGGCATCCTACCTTCAAACCCCCTTTCAATTCAGGTTT
TTCCCCCAGCGGTCGCCCAAGCGGAAATATACGACCGAGCAGCTAAAGGG
GTGGTAGACTCCGTTCTTCAAGGCTACAACGGAACAATTTTTGCCTGTAA
GTAGCCTCCTCATAGAGCACTCGTtttgttcctcctttcttttccttccc
ttttttgttCTTCGATCAGCCCTCCctatctttttcctccctcattttat
ctttcttctctgcttAGTGCTGCATTCTTAGGTTTATTGTTTCCCCGATA
ATTCTTCATTGACAACGGTTCAAAGCAGTGCCTTGTCTCATGTAGGCGCA
TGACCACCAGCCTCTTAGTTgtcttcttgctcttctaGGTCTTACAAATC
TCAAGCCATACGATCCCTCTGATATTATTATTGTCATGGGAGATTTTCTC
GCTCCTTATGTGCAACCCGATCATTCCACACTTGTCTGATTCAGACGGAC
AGACGGGCTCCGGCAAGACCTTCACCATGACGGGAGGTGACTCCTTTCAG
GAGCGCGGTCTCATCCCGCGCGCCATAAGTGACGTGTACGAGTCCATTGG
AGGGACTCCAGACCGAAAATTCAAGGTACTGGTTTGCTTTTCATCCGCCG
TGGATCTAGAACGTGAAAATCTCCGCCTGTGGAACCTAAGAATGGCTTTG
GCAATGGATATCGTACACACAGTTGATAAGATCGACCGTCCCGTGacttt
gctcctccttgattCCTGGCTCTCCCATACCCTTTCTTTTGCACAAGGAC
AACTGAGAGCGCGACCTGCTGGTAGCTCAATTCACACTGATACgtttcac
cctccctctttgtgcCCGCAAGGTCCTCATCTCCTACATGGAGATCTACA
AGGAGAGCGTCTATGATCTTTTGGACGTCGGCACCCGCAATAAGCCTTTG
GAGGACTGGACAAAGGTATCTCCACGCCTGCATCATTCGCTTACATCCCC
TACGCCCCGTTTCTTTCCTGCATTCGTTCCTAAATGGATTCGAGTGCTCA
ACAATCCTTCCatacccccccttcttttccctctcctcttggcATTGCAA
GGTACTGATGATGGACGACGAAGACGGAGAAATGCACCTCCGGCACCTAA
AGCTTTACGAAGCTGCATCTGAAGAGGATGCTCTCAACCTTCTTTTCATG
GGGAACTGGAACAGAATAACAAGCGAGACACCAATGTAAGTCGTAGGGGC
AAGAGAGAGTGCAGAAGGGACGAAAAACGGTATCAAAGGCGACATCTATC
TCATTATAATTATAATTATAACACGGGAAACGTCCTGATCATGACTTATT
CAAACTCAACGAGGGCCTAGGAATGAGGCAAGCACTCGCTCGCATTGCAT
CTTCACCATCCGCGTGCAGTCTGACCCCTTATTACCAGg back to topCoding sequence (CDS) from alignment at CM002458.1:1298550..1300788+ >rna2258 ID=rna2258|Name=rna2258|organism=Nannochloropsis gaditana|type=CDS|length=5550bp|location=Sequence derived from alignment at CM002458.1:1298550..1300788+ (Nannochloropsis gaditana)
ATGCCGTCACCAAGACCTCCTCGACATCGGCGTCCTTCTTCTGTTAGAAA
CATTATCGACTATCCATCTAGCCCCGCAAAATCACCACAAGGCGTGAGCT
GTCGTGCAGCACGCTCATCTCTGTCGGTAGGCGAGACCTCCTCGCAGGCT
TTCAAGTCCAAACTGTCTACACATCAAAATGCCCTCAAGGATGAGCAGAA
AGAAAGCAGAAGAGAACGGCTGAAAGACAGCGAGACGGAGCACGAGAATC
ATGCAGAGCAAAAGCAGCCGGGCAAAAGAATGACCTGGCGTGTAGAAACG
TTTTGTCGGTATGTACTTGTCAATAGATCTATCAAGGTCAGAGCCTTTAC
ACACACACACCAATATATCATCCCCTACAATAGTGTCAAGCCCCACTTAa
cgccatcttcccccccggctaAGTGTCTACGGTCGATCCCATACGAGCTA
CGACAGGGACAGGGCCCGCTTGGTAGCGATCCTCCGTACAGAAGCCTGCG
TATAGGATGTGCCGAAAGCAGCGCAGGTGCATTATTATGGAATACTCGCC
GACAAGAGATAGATTTCGATTTCACAGAGGTTTTTCCCCCAGCGGTCGCC
CAAGCGGAAATATACGACCGAGCAGCTAAAGGGGTGGTAGACTCCGTTCT
TCAAGGCTACAACGGAACAATTTTTGCCTACGGACAGACGGGCTCCGGCA
AGACCTTCACCATGACGGGAGGTGACTCCTTTCAGGAGCGCGGTCTCATC
CCGCGCGCCATAAGTGACGTGTACGAGTCCATTGGAGGGACTCCAGACCG
AAAATTCAAGGTCCTCATCTCCTACATGGAGATCTACAAGGAGAGCGTCT
ATGATCTTTTGGACGTCGGCACCCGCAATAAGCCTTTGGAGGACTGGACA
AAGGTATCTCCACGCCTGCATCATTCGCTTACATCCCCTACGCCCCGTTT
CTTTCCTGCATTCGTTCCTAAATGGATTCGAGTGCTCAACAATCCTTCCa
tacccccccttcttttccctctcctcttggcATTGCAAGGTACTGATGAT
GGACGACGAAGACGGAGAAATGCACCTCCGGCACCTAAAGCTTTACGAAG
CTGCATCTGAATGCCGTCACCAAGACCTCCTCGACATCGGCGTCCTTCTT
CTGTTAGAAACATTATCGACTATCCATCTAGCCCCGCAAAATCACCACAA
GGCGTGAGCTGTCGTGCAGCACGCTCATCTCTGTCGGTAGGCGAGACCTC
CTCGCAGGCTTTCAAGTCCAAACTGTCTACACATCAAAATGCCCTCAAGG
ATGAGCAGAAAGAAAGCAGAAGAGAACGGCTGAAAGACAGCGAGACGGAG
CACGAGAATCATGCAGAGCAAAAGCAGCCGGGCAAAAGAATGACCTGGCG
TGTAGAAACGTTTTGTCGGTATGTACTTGTCAATAGATCTATCAAGGTCA
GAGCCTTTACACACACACACCAATATATCATCCCCTACAATAGTGTCAAG
CCCCACTTAacgccatcttcccccccggctaAGTGTCTACGGTCGATCCC
ATACGAGCTACGACAGGGACAGGGCCCGCTTGGTAGCGATCCTCCGTACA
GAAGCCTGCGTATAGGATGTGCCGAAAGCAGCGCAGGTGCATTATTATGG
AATACTCGCCGACAAGAGATAGATTTCGATTTCACAGAGGTTTTTCCCCC
AGCGGTCGCCCAAGCGGAAATATACGACCGAGCAGCTAAAGGGGTGGTAG
ACTCCGTTCTTCAAGGCTACAACGGAACAATTTTTGCCTACGGACAGACG
GGCTCCGGCAAGACCTTCACCATGACGGGAGGTGACTCCTTTCAGGAGCG
CGGTCTCATCCCGCGCGCCATAAGTGACGTGTACGAGTCCATTGGAGGGA
CTCCAGACCGAAAATTCAAGGTCCTCATCTCCTACATGGAGATCTACAAG
GAGAGCGTCTATGATCTTTTGGACGTCGGCACCCGCAATAAGCCTTTGGA
GGACTGGACAAAGGTATCTCCACGCCTGCATCATTCGCTTACATCCCCTA
CGCCCCGTTTCTTTCCTGCATTCGTTCCTAAATGGATTCGAGTGCTCAAC
AATCCTTCCatacccccccttcttttccctctcctcttggcATTGCAAGG
TACTGATGATGGACGACGAAGACGGAGAAATGCACCTCCGGCACCTAAAG
CTTTACGAAGCTGCATCTGAATGCCGTCACCAAGACCTCCTCGACATCGG
CGTCCTTCTTCTGTTAGAAACATTATCGACTATCCATCTAGCCCCGCAAA
ATCACCACAAGGCGTGAGCTGTCGTGCAGCACGCTCATCTCTGTCGGTAG
GCGAGACCTCCTCGCAGGCTTTCAAGTCCAAACTGTCTACACATCAAAAT
GCCCTCAAGGATGAGCAGAAAGAAAGCAGAAGAGAACGGCTGAAAGACAG
CGAGACGGAGCACGAGAATCATGCAGAGCAAAAGCAGCCGGGCAAAAGAA
TGACCTGGCGTGTAGAAACGTTTTGTCGGTATGTACTTGTCAATAGATCT
ATCAAGGTCAGAGCCTTTACACACACACACCAATATATCATCCCCTACAA
TAGTGTCAAGCCCCACTTAacgccatcttcccccccggctaAGTGTCTAC
GGTCGATCCCATACGAGCTACGACAGGGACAGGGCCCGCTTGGTAGCGAT
CCTCCGTACAGAAGCCTGCGTATAGGATGTGCCGAAAGCAGCGCAGGTGC
ATTATTATGGAATACTCGCCGACAAGAGATAGATTTCGATTTCACAGAGG
TTTTTCCCCCAGCGGTCGCCCAAGCGGAAATATACGACCGAGCAGCTAAA
GGGGTGGTAGACTCCGTTCTTCAAGGCTACAACGGAACAATTTTTGCCTA
CGGACAGACGGGCTCCGGCAAGACCTTCACCATGACGGGAGGTGACTCCT
TTCAGGAGCGCGGTCTCATCCCGCGCGCCATAAGTGACGTGTACGAGTCC
ATTGGAGGGACTCCAGACCGAAAATTCAAGGTCCTCATCTCCTACATGGA
GATCTACAAGGAGAGCGTCTATGATCTTTTGGACGTCGGCACCCGCAATA
AGCCTTTGGAGGACTGGACAAAGGTATCTCCACGCCTGCATCATTCGCTT
ACATCCCCTACGCCCCGTTTCTTTCCTGCATTCGTTCCTAAATGGATTCG
AGTGCTCAACAATCCTTCCatacccccccttcttttccctctcctcttgg
cATTGCAAGGTACTGATGATGGACGACGAAGACGGAGAAATGCACCTCCG
GCACCTAAAGCTTTACGAAGCTGCATCTGAATGCCGTCACCAAGACCTCC
TCGACATCGGCGTCCTTCTTCTGTTAGAAACATTATCGACTATCCATCTA
GCCCCGCAAAATCACCACAAGGCGTGAGCTGTCGTGCAGCACGCTCATCT
CTGTCGGTAGGCGAGACCTCCTCGCAGGCTTTCAAGTCCAAACTGTCTAC
ACATCAAAATGCCCTCAAGGATGAGCAGAAAGAAAGCAGAAGAGAACGGC
TGAAAGACAGCGAGACGGAGCACGAGAATCATGCAGAGCAAAAGCAGCCG
GGCAAAAGAATGACCTGGCGTGTAGAAACGTTTTGTCGGTATGTACTTGT
CAATAGATCTATCAAGGTCAGAGCCTTTACACACACACACCAATATATCA
TCCCCTACAATAGTGTCAAGCCCCACTTAacgccatcttcccccccggct
aAGTGTCTACGGTCGATCCCATACGAGCTACGACAGGGACAGGGCCCGCT
TGGTAGCGATCCTCCGTACAGAAGCCTGCGTATAGGATGTGCCGAAAGCA
GCGCAGGTGCATTATTATGGAATACTCGCCGACAAGAGATAGATTTCGAT
TTCACAGAGGTTTTTCCCCCAGCGGTCGCCCAAGCGGAAATATACGACCG
AGCAGCTAAAGGGGTGGTAGACTCCGTTCTTCAAGGCTACAACGGAACAA
TTTTTGCCTACGGACAGACGGGCTCCGGCAAGACCTTCACCATGACGGGA
GGTGACTCCTTTCAGGAGCGCGGTCTCATCCCGCGCGCCATAAGTGACGT
GTACGAGTCCATTGGAGGGACTCCAGACCGAAAATTCAAGGTCCTCATCT
CCTACATGGAGATCTACAAGGAGAGCGTCTATGATCTTTTGGACGTCGGC
ACCCGCAATAAGCCTTTGGAGGACTGGACAAAGGTATCTCCACGCCTGCA
TCATTCGCTTACATCCCCTACGCCCCGTTTCTTTCCTGCATTCGTTCCTA
AATGGATTCGAGTGCTCAACAATCCTTCCatacccccccttcttttccct
ctcctcttggcATTGCAAGGTACTGATGATGGACGACGAAGACGGAGAAA
TGCACCTCCGGCACCTAAAGCTTTACGAAGCTGCATCTGAATGCCGTCAC
CAAGACCTCCTCGACATCGGCGTCCTTCTTCTGTTAGAAACATTATCGAC
TATCCATCTAGCCCCGCAAAATCACCACAAGGCGTGAGCTGTCGTGCAGC
ACGCTCATCTCTGTCGGTAGGCGAGACCTCCTCGCAGGCTTTCAAGTCCA
AACTGTCTACACATCAAAATGCCCTCAAGGATGAGCAGAAAGAAAGCAGA
AGAGAACGGCTGAAAGACAGCGAGACGGAGCACGAGAATCATGCAGAGCA
AAAGCAGCCGGGCAAAAGAATGACCTGGCGTGTAGAAACGTTTTGTCGGT
ATGTACTTGTCAATAGATCTATCAAGGTCAGAGCCTTTACACACACACAC
CAATATATCATCCCCTACAATAGTGTCAAGCCCCACTTAacgccatcttc
ccccccggctaAGTGTCTACGGTCGATCCCATACGAGCTACGACAGGGAC
AGGGCCCGCTTGGTAGCGATCCTCCGTACAGAAGCCTGCGTATAGGATGT
GCCGAAAGCAGCGCAGGTGCATTATTATGGAATACTCGCCGACAAGAGAT
AGATTTCGATTTCACAGAGGTTTTTCCCCCAGCGGTCGCCCAAGCGGAAA
TATACGACCGAGCAGCTAAAGGGGTGGTAGACTCCGTTCTTCAAGGCTAC
AACGGAACAATTTTTGCCTACGGACAGACGGGCTCCGGCAAGACCTTCAC
CATGACGGGAGGTGACTCCTTTCAGGAGCGCGGTCTCATCCCGCGCGCCA
TAAGTGACGTGTACGAGTCCATTGGAGGGACTCCAGACCGAAAATTCAAG
GTCCTCATCTCCTACATGGAGATCTACAAGGAGAGCGTCTATGATCTTTT
GGACGTCGGCACCCGCAATAAGCCTTTGGAGGACTGGACAAAGGTATCTC
CACGCCTGCATCATTCGCTTACATCCCCTACGCCCCGTTTCTTTCCTGCA
TTCGTTCCTAAATGGATTCGAGTGCTCAACAATCCTTCCataccccccct
tcttttccctctcctcttggcATTGCAAGGTACTGATGATGGACGACGAA
GACGGAGAAATGCACCTCCGGCACCTAAAGCTTTACGAAGCTGCATCTGA back to top
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