EWM28423.1, cds2250 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|585110810|gb|EWM28423.1| (kif6 type kinesin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 761.911 bits (1966), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MPSPRPPRHRRPSSVRNIIDYPSSPAKSPQGVSCRAARSSLSVGETSSQAFKSKLSTHQNALKDEQKESRRERLKDSETEHENHAEQKQPGKRMTWRVETFCRYVLVNRSIKVRAFTHTHQYIIPYNSVKPHLTPSSPPAKCLRSIPYELRQGQGPLGSDPPYRSLRIGCAESSAGALLWNTRRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKVSPRLHHSLTSPTPRFFPAFVPKWIRVLNNPSIPPLLFPLLLALQGTDDGRRRRRNAPPAPKALRSCI 369 MPSPRPPRHRRPSSVRNIIDYPSSPAKSPQGVSCRAARSSLSVGETSSQAFKSKLSTHQNALKDEQKESRRERLKDSETEHENHAEQKQPGKRMTWRVETFCRYVLVNRSIKVRAFTHTHQYIIPYNSVKPHLTPSSPPAKCLRSIPYELRQGQGPLGSDPPYRSLRIGCAESSAGALLWNTRRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKVSPRLHHSLTSPTPRFFPAFVPKWIRVLNNPSIPPLLFPLLLALQGTDDGRRRRRNAPPAPKALRSCI Sbjct: 1 MPSPRPPRHRRPSSVRNIIDYPSSPAKSPQGVSCRAARSSLSVGETSSQAFKSKLSTHQNALKDEQKESRRERLKDSETEHENHAEQKQPGKRMTWRVETFCRYVLVNRSIKVRAFTHTHQYIIPYNSVKPHLTPSSPPAKCLRSIPYELRQGQGPLGSDPPYRSLRIGCAESSAGALLWNTRRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKVSPRLHHSLTSPTPRFFPAFVPKWIRVLNNPSIPPLLFPLLLALQGTDDGRRRRRNAPPAPKALRSCI 369
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|553178489|ref|XP_005852559.1| (kinesin-like protein [Nannochloropsis gaditana CCMP526] >gi|553184295|ref|XP_005854065.1| kinesin-like protein [Nannochloropsis gaditana CCMP526] >gi|422294996|gb|EKU22295.1| kinesin-like protein [Nannochloropsis gaditana CCMP526] >gi|422295973|gb|EKU23272.1| kinesin-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 141.739 bits (356), Expect = 3.836e-38 Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 Query: 238 MTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKV 302 MTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKV Sbjct: 1 MTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKV 65
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|673016562|ref|XP_008862242.1| (hypothetical protein H310_01019 [Aphanomyces invadans] >gi|574481445|gb|ETW08437.1| hypothetical protein H310_01019 [Aphanomyces invadans]) HSP 1 Score: 148.673 bits (374), Expect = 7.737e-36 Identity = 65/124 (52.42%), Postives = 91/124 (73.39%), Query Frame = 0 Query: 183 RRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKVSPRL 306 +R E++F +T+VF +Q +I+ A GVV ++GYNGTI AYGQTGSGKTFT+TGG+S+QERG++PRAIS ++++ D +K ISY+EIY +SVYDLLD NKP+E WT++ +L Sbjct: 53 QRDELEFKYTQVFDCPTSQDKIFHDACLGVVTGAVEGYNGTILAYGQTGSGKTFTITGGESYQERGIVPRAISTLFDAFEARTDMTYKCYISYLEIYNDSVYDLLDRTHMNKPIEAWTRLQVQL 176
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|673016564|ref|XP_008862243.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574481446|gb|ETW08438.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 148.288 bits (373), Expect = 1.069e-35 Identity = 65/124 (52.42%), Postives = 91/124 (73.39%), Query Frame = 0 Query: 183 RRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKVSPRL 306 +R E++F +T+VF +Q +I+ A GVV ++GYNGTI AYGQTGSGKTFT+TGG+S+QERG++PRAIS ++++ D +K ISY+EIY +SVYDLLD NKP+E WT++ +L Sbjct: 53 QRDELEFKYTQVFDCPTSQDKIFHDACLGVVTGAVEGYNGTILAYGQTGSGKTFTITGGESYQERGIVPRAISTLFDAFEARTDMTYKCYISYLEIYNDSVYDLLDRTHMNKPIEAWTRLQVQL 176
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|698777921|ref|XP_009822004.1| (hypothetical protein H257_00815 [Aphanomyces astaci] >gi|574124129|gb|ETV89604.1| hypothetical protein H257_00815 [Aphanomyces astaci]) HSP 1 Score: 144.436 bits (363), Expect = 2.370e-34 Identity = 63/125 (50.40%), Postives = 90/125 (72.00%), Query Frame = 0 Query: 183 RRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGG-TPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKVSPRL 306 +R E++F +T+VF +Q I++ A +V + GYNGTI AYGQTGSGKTFT+TGG+S+QERG++PR IS ++E+ + D +K ISY+EIY E+VYDLLD NKP+E+WT++ +L Sbjct: 53 QRDELEFKYTQVFEHPTSQDTIFNEACLDIVTGAIDGYNGTILAYGQTGSGKTFTITGGESYQERGMVPRVISTLFETFESRSHDMSYKCFISYLEIYNENVYDLLDRAHMNKPVEEWTRIQVQL 177
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|954188699|gb|KRX01515.1| (P-loop containing nucleoside triphosphate hydrolase [Pseudocohnilembus persalinus]) HSP 1 Score: 140.969 bits (354), Expect = 5.308e-34 Identity = 61/121 (50.41%), Postives = 89/121 (73.55%), Query Frame = 0 Query: 184 RQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGG-TPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKVS 303 R +DF+FT+V V+Q +++++ AK VVD+ +QG+NGT+FAYGQTGSGKT+TM G +++Q+RG+IPR IS +Y+ I D +F + IS+MEIY E+ YDLLD + PLE W K++ Sbjct: 6 RDIMDFNFTQVLSEDVSQEQVFNKVAKPVVDNCMQGFNGTVFAYGQTGSGKTYTMNGSETWQDRGIIPRTISYIYDQIEARQDDIEFNLYISFMEIYNENAYDLLDHRHLDSPLESWNKIN 126
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|970655299|gb|KUF93482.1| (hypothetical protein AM588_10011270 [Phytophthora nicotianae]) HSP 1 Score: 142.895 bits (359), Expect = 5.873e-34 Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 0 Query: 183 RRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKV 302 +R +DF F +VF P+V+Q +++ +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR +S ++E P+ ++ ISY+EIY E+VYDLLD ++P+EDWTKV Sbjct: 44 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKV 163
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|1173951172|gb|OQR99085.1| (kinesin-like protein [Achlya hypogyna]) HSP 1 Score: 142.895 bits (359), Expect = 6.560e-34 Identity = 58/124 (46.77%), Postives = 90/124 (72.58%), Query Frame = 0 Query: 183 RRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKVSPRL 306 +R+E++F+++ VF V Q +++ + ++ S + GYNGTI AYGQTGSGKTFT+TGG+S+ +RG+IPR IS ++++ D ++ +SY+EIY E+VYDLLD NKP+E+WTK+ +L Sbjct: 50 QREELEFNYSRVFDHDVNQDVVFENVCQDIIRSAMDGYNGTILAYGQTGSGKTFTITGGESYHDRGMIPRTISALFDAFETRSDMSYRCFVSYLEIYNENVYDLLDKSHINKPIEEWTKIHLQL 173
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|570965634|gb|ETP28753.1| (hypothetical protein F442_21986 [Phytophthora parasitica P10297] >gi|570965635|gb|ETP28754.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297] >gi|570965636|gb|ETP28755.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570965637|gb|ETP28756.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297] >gi|570965638|gb|ETP28757.1| hypothetical protein, variant 4 [Phytophthora parasitica P10297]) HSP 1 Score: 143.28 bits (360), Expect = 7.060e-34 Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 0 Query: 183 RRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKV 302 +R +DF F +VF P+V+Q +++ +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR +S ++E P+ ++ ISY+EIY E+VYDLLD ++P+EDWTKV Sbjct: 55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKV 174
BLAST of EWM28423.1 vs. NCBI_GenBank
Match: gi|567973979|gb|ETL24627.1| (hypothetical protein L916_21382 [Phytophthora parasitica]) HSP 1 Score: 143.28 bits (360), Expect = 7.196e-34 Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 0 Query: 183 RRQEIDFDFTEVFPPAVAQAEIYDRAAKGVVDSVLQGYNGTIFAYGQTGSGKTFTMTGGDSFQERGLIPRAISDVYESIGGTPDRKFKVLISYMEIYKESVYDLLDVGTRNKPLEDWTKV 302 +R +DF F +VF P+V+Q +++ +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR +S ++E P+ ++ ISY+EIY E+VYDLLD ++P+EDWTKV Sbjct: 55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKV 174 The following BLAST results are available for this feature:
BLAST of EWM28423.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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