|
|
Properties
| Property Name | Value |
|---|
| Product | methionine synthase mitochondrial precursor-like protein |
| Orig transcript id | gnl|cribi|Naga_100388g6.10439.mrna |
| Orig protein id | gnl|cribi|Naga_100388g6.10439 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1266037..1269578 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2253 ID=rna2253|Name=rna2253|organism=Nannochloropsis gaditana|type=mRNA|length=957bp
ATGGCACGTTCACCTGTAGACTGCGTGGATAAAAACTACGTATACGACAT
CCACAGGTCTGGGTGGACCTTGGGGACAAGGGCGATCATGGCTACGGTCG
CGACTTCAACTTTCTCAGTGCCACCTCCCCATGGTCATGCCCTCTTCGTC
AATCACCATGGAAGCGACGTGGGGGGTTCGGAGGAACACCATGACTACCA
GCAGCCGCATTTACAAGATTTGCAAGATGAACAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGTATGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGGCGACGGGAGCGAGGAGGGGGAGGAAGAGGAAGCAGGAATGGTGCC
GTGGTGGGCGGTGCAGCAACAACACAGGAATTTGGAAGAAGGAAGGTCTG
ACAATCGATATGGCGAGCTGCGCGAGCATGAGTACGCCAGCGACGAGGAG
GAAGAGGAGGACGAGGACGAGGTCGGGGAGGAGGGTAGGGGCGGAGGGCC
CTTTGTCAGGCGCACAGGCCATGTGGGATTTGCGTCGGTAAGCAGGAGTC
ATCGCTCCTTTCCCGGGGACGGAACTGCTCGCACGCAGTCGCAAAGGACG
AGGAAGAAGAAAGCGAAGGAGGAGGAGGGATGGAGGGTGTTGCAGGGCCC
GCGCGTGTATGCCTGCGGATTCTGTCGGATGCATTTGGCCACGGACATGG
AGGTCGTCTCCCGGGCATTTCAAGGACGCGGGGGCCGCGCATTTCTTCTC
GATGATGTCGTGAACGTCTCCTTTGGCCCCTCCGAAGAGCGGCTTCTTAT
GACGGGGCTCCACGCGGTCAGCGACGTCTGCTGTGCTGGGTGTCAGACAG
TGGTGGGATGGAAATACGATAAAGCCTACGAAGCGACTCAGAAGTACAAG
GAGGGGAAATTTATCCTGGAGAAGGTCCATTTGGTCGTGGAGGAGGAGGC
CTGGTAG back to topprotein sequence of rna2253 >rna2253-protein ID=rna2253-protein|Name=rna2253|organism=Nannochloropsis gaditana|type=polypeptide|length=730bp
MVNTDGDASHPSILVCFGSATGNSEFIAKRIHAELQNKHGLPGARLLAMN
DWKKLSNPTFEEYEAGIFVCATTGNGDAPENAEKFWRFLKRRTQPKTLLA
NRMHFAVLGLGDTNYDKFCHMGKSMDTRLSEVGGRRMHNLGTADEAVGLE
GTVEPWIETLYPALMKALGRDEAGAKDTALASVGNGEASNKANDDSTLGV
GPETGREGMAGQGEEGAPAMEVERVAVEGKVEEKDAEPHVADRVGLPQAR
GGPLTQASGAQWVESLLAPADFQQIRETALAAAKDRPWTAYTPSVKVVFM
DESGPGAGCTPPVAEAHPIPRRGSPPRSSTSSQSSLPCSTPFSHGGAFPT
PSAAPSPTALKPPSPFKGRLSPFTGVTGGGRAAPTGSAPVATPQAQGASY
SYEHPAQAKVRHAVYLTKTAGDGHHSEPPTRRVLELELDTQDCDPPFPYV
PGDAVGIRCPNRTEAVERVLERVGREGGRAGNRKSRLQVTDGVAVGGVLG
TACWTLEEVVREVMDLEGTPKPHVLKALAAYTQDEGDQALLWWLGAGGEG
GKALYESWILEQRLSLAEVLELIPSAAPTLAALLDLLPPLPPRYLLCGVL
PLGLSHPATYRLQRGRVRAPTSRGGGSDGRVSAPPGWKACCERRPGPPVG
TTSASIRRPLPPPSLPPSPLYLKTGQGIRPSRQPLLAPDFGGARNGRGSV
HGVFVPPTGAERGLETLAVRSVLRLLAGGF back to topmRNA from alignment at CM002458.1:1266037..1269578- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2253 ID=rna2253|Name=rna2253|organism=Nannochloropsis gaditana|type=mRNA|length=3542bp|location=Sequence derived from alignment at CM002458.1:1266037..1269578- (Nannochloropsis gaditana)
ACAACGTGACAAGAGCATCACCTTTGCCTGTTGACCATTTATCTCTATAT
TTACAAGCCCGATGCCATGATTAAAAGGAAAATAATTTGTGGCCCGATGG
GGGGCTTGTCCGTTTGTCATGGTAACGGATACTGGGTCGCATGCAATAGG
ATGGATGACTCACAGCTTCTCGGTGCACTGTAACATAAGGGAAAATAAGC
TTCACATTGTCAGCGGCTTCCAGCACCCATTCATACAACAGGAGTTGACG
ACTGCCTCGGGTCTAAATTGCGAAAATGGTTAATACCGATGGAGATGCAA
GGTATGCTCGCGGGGCTCCCTCTGTCTTCCATGCATTGCGGCTGTCGGCT
TTCCTGCTTTATTCCACTTCCACAACCCCACCGCTCATCACACATCCCAC
ACAACCTCTAGCCACCCCTCCATTCTGGTATGTTTTGGAAGCGCCACGGG
CAATTCCGAGTTCATCGCCAAGCGCATCCACGCCGAGCTTCAGAACAAGC
ATGGATTACCAGGTGCCCGGTTGCTGGCCATGAATGATTGGAAGAAGCTA
TCCAATCCCACATTTGAAGAGTACGAGGCAGGCATATTTGTGTGCGCCAC
TACTGGGAATGGTGACGCCCCGGAAAATGCAGAAAAATTCTGGCGCTTCC
TGAAGCGGCGGACGCAGCCCAAGACGCTCCTGGCCAACCGAATGCACTTC
GCCGTGTTGGGTCTGGGGGACACGAACTACGATAAATTCTGTCACATGGG
CAAGAGTATGGACACGCGCTTGTCCGAAGTGGGTGGCCGACGAATGCACA
ATTTGGGGACAGCGGACGAGGCCGTGGGATTGGAAGGCACAGTGGAACCC
TGGATTGAAACTCTGTATCCGGCGTTGATGAAAGCGTTAGGGAGGGACGA
AGCTGGCGCAAAGGATACGGCCCTTGCCTCGGTGGGCAACGGAGAAGCCT
CAAACAAGGCCAATGATGACAGCACCCTCGGTGTGGGCCCGGAGACCGGG
AGGGAGGGAATGGCCGGGCAGGGGGAGGAAGGAGCCCCTGCAATGGAGGT
GGAAAGGGTGGCCGTGGAAGGCAAAGTGGAGGAAAAAGACGCGGAGCCAC
ACGTGGCGGATCGCGTGGGCCTGCCTCAAGCGAGAGGGGGGCCTTTGACG
CAAGCAAGCGGGGCTCAGTGGGTGGAAAGCCTTCTGGCCCCCGCCGACTT
CCAACAAATCCGAGAGACGGCGTTGGCAGCAGCCAAAGACCGACCCTGGA
CCGCATACACCCCCTCCGTCAAGGTCGTTTTTATGGACGAGAGCGGCCCC
GGGGCGGGATGCACCCCGCCTGTCGCCGAGGCCCACCCCATCCCGAGACG
GGGTTCTCCCCCACGCTCCTCCACCTCCTCCCAGTCCTCCCTCCCTTGCT
CGACACCTTTTAGCCATGGCGGGGCTTTCCCCACGCCTTCGGCTGCCCCT
TCCCCTACTGCGCTCAAACCACCCAGCCCCTTCAAAGGACGACTCTCCCC
CTTCACGGGCGTGACGGGCGGGGGTAGGGCGGCTCCCACCGGCTCCGCCC
CCGTAGCAACCCCGCAAGCACAGGGAGCCAGCTACAGCTACGAACATCCC
GCACAGGCGAAAGTGCGACACGCCGTGTACTTGACCAAGACGGCAGGAGA
CGGACACCACTCGGAGCCCCCCACCCGCCGGGTCCTGGAGCTGGAGCTTG
ACACCCAGGACTGTGACCCGCCCTTCCCGTACGTGCCCGGGGACGCGGTG
GGTATCCGGTGCCCGAACCGGACGGAGGCGGTGGAAAGAGTGCTGGAGCG
GGTGGGGAGGGAGGGAGGGAGGGCGGGCAACCGAAAGTCGCGGCTGCAGG
TGACGGATGGTGTGGCGGTAGGAGGAGTCTTGGGGACGGCGTGCTGGACG
CTGGAGGAGGTGGTAAGGGAGGTGATGGATCTGGAAGGGACGCCCAAGCC
CCACGTCCTGAAGGCGCTGGCCGCTTATACCCAGGACGAGGGCGACCAGG
CCTTGCTCTGGTGGCTGGGGGCGGGAGGGGAGGGAGGAAAAGCCCTCTAC
GAGTCGTGGATATTGGAGCAACGTCTGTCGCTGGCGGAAGTCTTGGAATT
GATCCCCTCCGCGGCCCCTACCTTGGCAGCCCTGCTCGATCTGCTCCCGC
CCTTGCCCCCCCGGTACCTACTCTGTGGCGTCCTCCCCCTTGGTCTGTCC
CACCCGGCTACGTATCGCCTTCAGCGTGGTCGAGTACGAGCTCCCACGTC
CCGGGGGGGGGGATCCGACGGACGGGTCTCTGCACCTCCTGGATGGAAAG
CATGCTGCGAGAGGCGGCCGGGCCCGCCAGTGGGGACGACAAGTGCCTCT
ATACGTCGTCCCTTGCCCCCTCCCTCCCTCCCTCCCTCCCCCCTGTACCT
GAAAACCGGCCAAGGAATTCGTCCTTCCAGGCAGCCCCTCCTGGCCCCTG
ATTTTGGTGGGGCCCGGAACGGGCGTGGCTCCGTTCATGGGGTTTTTGTC
CCACCGACAGGCGCGGAGAGAGGCCTTGAAACACTCGCGGTCCGAAGTGT
GCTCCGGTTACTGGCGGGGGGGTTTTGACGTGTGGGACGACGCGGACGGG
GCGGGGACCGGGGTGGAAATGGAGGAGGAAGGGATAGGGTCCTTCGCGCA
GAAGGGAGGGGAAGGACCGATCTGGTTGTTCTTTGGGTGTCGAACGAAAG
CGGGGGACTGGATCTATCGGGAGGAAATGGAAAATTTCTTGAAACGGGGT
GTCTTGAGTGAGTTGCAGACGGCGTTTTCGAGGGAGAGCGCTCGAAAAGT
GTACGTGCAAGACAGGATGCAGGAGCAAGGGGAGGCGCTGGCCCGGATGC
TGCTGAAGGAAGGGGCCTATCTCTACGTGTGCGGGGACGCCGAGCACATG
GCCCGCGACGTGCATGCCAGCCTGAGGACCCTCTTGGTGCAGCACGGGGG
TAGACAGGAGGGGTTAGGGAGTGAGGAAGAGGCAGAGGCCTTCCTGGTCG
AGTTAAAGCAGCGCCAGCGTTATGTATTGGACATATGGGCGTAAAGCGAT
GCGAGAAGGGGGAAAGGGCAGTAATGTGGGAGGGATCCTGTAGCGTTGGC
GCAGGAGCAGGAGCTTGCCAGCGAGCACCGTTCAAATCAATCAGACCCGA
TAAGAATGCACTCGGCCTCTGCCGCTTCCCTCCTTTGACTTTGGATGTGC
GCAGGATGGAGGGCACTTTGACTGCGTCCCGGTGGGCCCGCTTTCTGGTC
GACTCCGAAATCCTCCGAACAAGCTCGCCGAACCGATTTCCTTCGAGAGG
GCTGGCATGACACGGGGTGCATTGTGGCCTGAGGGAGATGCCACGCACGT
CTGTGAGCCCTTCATGGAGACGGCGCCGAGCATGAAAGGGAGGAGGTGAC
AAGAGAGCTGTGGCATGACGCGGCTCAGCAGCAAGGTATTCGCGATGGAC
AATATAAAGGAATTTAAAAATGACGTACAGATTGAAGCTATCGACCACTC
GAAAGGCGAATTGTCAAAGAAATCAAACAGGGCGCGATATCT back to topCoding sequence (CDS) from alignment at CM002458.1:1266037..1269578- >rna2253 ID=rna2253|Name=rna2253|organism=Nannochloropsis gaditana|type=CDS|length=4386bp|location=Sequence derived from alignment at CM002458.1:1266037..1269578- (Nannochloropsis gaditana)
CCACCCCTCCATTCTGGTATGTTTTGGAAGCGCCACGGGCAATTCCGAGT
TCATCGCCAAGCGCATCCACGCCGAGCTTCAGAACAAGCATGGATTACCA
GGTGCCCGGTTGCTGGCCATGAATGATTGGAAGAAGCTATCCAATCCCAC
ATTTGAAGAGTACGAGGCAGGCATATTTGTGTGCGCCACTACTGGGAATG
GTGACGCCCCGGAAAATGCAGAAAAATTCTGGCGCTTCCTGAAGCGGCGG
ACGCAGCCCAAGACGCTCCTGGCCAACCGAATGCACTTCGCCGTGTTGGG
TCTGGGGGACACGAACTACGATAAATTCTGTCACATGGGCAAGAGTATGG
ACACGCGCTTGTCCGAAGTGGGTGGCCGACGAATGCACAATTTGGGGACA
GCGGACGAGGCCGTGGGATTGGAAGGCACAGTGGAACCCTGGATTGAAAC
TCTGTATCCGGCGTTGATGAAAGCGTTAGGGAGGGACGAAGCTGGCGCAA
AGGATACGGCCCTTGCCTCGGTGGGCAACGGAGAAGCCTCAAACAAGGCC
AATGATGACAGCACCCTCGGTGTGGGCCCGGAGACCGGGAGGGAGGGAAT
GGCCGGGCAGGGGGAGGAAGGAGCCCCTGCAATGGAGGTGGAAAGGGTGG
CCGTGGAAGGCAAAGTGGAGGAAAAAGACGCGGAGCCACACGTGGCGGAT
CGCGTGGGCCTGCCTCAAGCGAGAGGGGGGCCTTTGACGCAAGCAAGCGG
GGCTCAGTGGGTGGAAAGCCTTCTGGCCCCCGCCGACTTCCAACAAATCC
GAGAGACGGCGTTGGCAGCAGCCAAAGACCGACCCTGGACCGCATACACC
CCCTCCGTCAAGGTCGTTTTTATGGACGAGAGCGGCCCCGGGGCGGGATG
CACCCCGCCTGTCGCCGAGGCCCACCCCATCCCGAGACGGGGTTCTCCCC
CACGCTCCTCCACCTCCTCCCAGTCCTCCCTCCCTTGCTCGACACCTTTT
AGCCATGGCGGGGCTTTCCCCACGCCTTCGGCTGCCCCTTCCCCTACTGC
GCTCAAACCACCCAGCCCCTTCAAAGGACGACTCTCCCCCTTCACGGGCG
TGACGGGCGGGGGTAGGGCGGCTCCCACCGGCTCCGCCCCCGTAGCAACC
CCGCAAGCACAGGGAGCCAGCTACAGCTACGAACATCCCGCACAGGCGAA
AGTGCGACACGCCGTGTACTTGACCAAGACGGCAGGAGACGGACACCACT
CGGAGCCCCCCACCCGCCGGGTCCTGGAGCTGGAGCTTGACACCCAGGAC
TGTGACCCGCCCTTCCCGTACGTGCCCGGGGACGCGGTGGGTATCCGGTG
CCCGAACCGGACGGAGGCGGTGGAAAGAGTGCTGGAGCGGGTGGGGAGGG
AGGGAGGGAGGGCGGGCAACCGAAAGTCGCGGCTGCAGGTGACGGATGGT
GTGGCGGTAGGAGGAGTCTTGGGGACGGCGTGCTGGACGCTGGAGGAGGT
GGTAAGGGAGGTGATGGATCTGGAAGGGACGCCCAAGCCCCACGTCCTGA
AGGCGCTGGCCGCTTATACCCAGGACGAGGGCGACCAGGCCTTGCTCTGG
TGGCTGGGGGCGGGAGGGGAGGGAGGAAAAGCCCTCTACGAGTCGTGGAT
ATTGGAGCAACGTCTGTCGCTGGCGGAAGTCTTGGAATTGATCCCCTCCG
CGGCCCCTACCTTGGCAGCCCTGCTCGATCTGCTCCCGCCCTTGCCCCCC
CGGTACCTACTCTGTGGCGTCCTCCCCCTTGGTCTGTCCCACCCGGCTAC
GTATCGCCTTCAGCGTGGTCGAGTACGAGCTCCCACGTCCCGGGGGGGGG
GATCCGACGGACGGGTCTCTGCACCTCCTGGATGGAAAGCATGCTGCGAG
AGGCGGCCGGGCCCGCCAGTGGGGACGACAAGTGCCTCTATACGTCGTCC
CTTGCCCCCTCCCTCCCTCCCTCCCTCCCCCCTGTACCTGAAAACCGGCC
AAGGAATTCGTCCTTCCAGGCAGCCCCTCCTGGCCCCTGATTTTGGTGGG
GCCCGGAACGGGCGTGGCTCCGTTCATGGGGTTTTTGTCCCACCGACAGG
CGCGGAGAGAGGCCTTGAAACACTCGCGGTCCGAAGTGTGCTCCGGTTAC
TGGCGGGGGGGTTTTGAATGGTTAATACCGATGGAGATGCAAGCCACCCC
TCCATTCTGGTATGTTTTGGAAGCGCCACGGGCAATTCCGAGTTCATCGC
CAAGCGCATCCACGCCGAGCTTCAGAACAAGCATGGATTACCAGGTGCCC
GGTTGCTGGCCATGAATGATTGGAAGAAGCTATCCAATCCCACATTTGAA
GAGTACGAGGCAGGCATATTTGTGTGCGCCACTACTGGGAATGGTGACGC
CCCGGAAAATGCAGAAAAATTCTGGCGCTTCCTGAAGCGGCGGACGCAGC
CCAAGACGCTCCTGGCCAACCGAATGCACTTCGCCGTGTTGGGTCTGGGG
GACACGAACTACGATAAATTCTGTCACATGGGCAAGAGTATGGACACGCG
CTTGTCCGAAGTGGGTGGCCGACGAATGCACAATTTGGGGACAGCGGACG
AGGCCGTGGGATTGGAAGGCACAGTGGAACCCTGGATTGAAACTCTGTAT
CCGGCGTTGATGAAAGCGTTAGGGAGGGACGAAGCTGGCGCAAAGGATAC
GGCCCTTGCCTCGGTGGGCAACGGAGAAGCCTCAAACAAGGCCAATGATG
ACAGCACCCTCGGTGTGGGCCCGGAGACCGGGAGGGAGGGAATGGCCGGG
CAGGGGGAGGAAGGAGCCCCTGCAATGGAGGTGGAAAGGGTGGCCGTGGA
AGGCAAAGTGGAGGAAAAAGACGCGGAGCCACACGTGGCGGATCGCGTGG
GCCTGCCTCAAGCGAGAGGGGGGCCTTTGACGCAAGCAAGCGGGGCTCAG
TGGGTGGAAAGCCTTCTGGCCCCCGCCGACTTCCAACAAATCCGAGAGAC
GGCGTTGGCAGCAGCCAAAGACCGACCCTGGACCGCATACACCCCCTCCG
TCAAGGTCGTTTTTATGGACGAGAGCGGCCCCGGGGCGGGATGCACCCCG
CCTGTCGCCGAGGCCCACCCCATCCCGAGACGGGGTTCTCCCCCACGCTC
CTCCACCTCCTCCCAGTCCTCCCTCCCTTGCTCGACACCTTTTAGCCATG
GCGGGGCTTTCCCCACGCCTTCGGCTGCCCCTTCCCCTACTGCGCTCAAA
CCACCCAGCCCCTTCAAAGGACGACTCTCCCCCTTCACGGGCGTGACGGG
CGGGGGTAGGGCGGCTCCCACCGGCTCCGCCCCCGTAGCAACCCCGCAAG
CACAGGGAGCCAGCTACAGCTACGAACATCCCGCACAGGCGAAAGTGCGA
CACGCCGTGTACTTGACCAAGACGGCAGGAGACGGACACCACTCGGAGCC
CCCCACCCGCCGGGTCCTGGAGCTGGAGCTTGACACCCAGGACTGTGACC
CGCCCTTCCCGTACGTGCCCGGGGACGCGGTGGGTATCCGGTGCCCGAAC
CGGACGGAGGCGGTGGAAAGAGTGCTGGAGCGGGTGGGGAGGGAGGGAGG
GAGGGCGGGCAACCGAAAGTCGCGGCTGCAGGTGACGGATGGTGTGGCGG
TAGGAGGAGTCTTGGGGACGGCGTGCTGGACGCTGGAGGAGGTGGTAAGG
GAGGTGATGGATCTGGAAGGGACGCCCAAGCCCCACGTCCTGAAGGCGCT
GGCCGCTTATACCCAGGACGAGGGCGACCAGGCCTTGCTCTGGTGGCTGG
GGGCGGGAGGGGAGGGAGGAAAAGCCCTCTACGAGTCGTGGATATTGGAG
CAACGTCTGTCGCTGGCGGAAGTCTTGGAATTGATCCCCTCCGCGGCCCC
TACCTTGGCAGCCCTGCTCGATCTGCTCCCGCCCTTGCCCCCCCGGTACC
TACTCTGTGGCGTCCTCCCCCTTGGTCTGTCCCACCCGGCTACGTATCGC
CTTCAGCGTGGTCGAGTACGAGCTCCCACGTCCCGGGGGGGGGGATCCGA
CGGACGGGTCTCTGCACCTCCTGGATGGAAAGCATGCTGCGAGAGGCGGC
CGGGCCCGCCAGTGGGGACGACAAGTGCCTCTATACGTCGTCCCTTGCCC
CCTCCCTCCCTCCCTCCCTCCCCCCTGTACCTGAAAACCGGCCAAGGAAT
TCGTCCTTCCAGGCAGCCCCTCCTGGCCCCTGATTTTGGTGGGGCCCGGA
ACGGGCGTGGCTCCGTTCATGGGGTTTTTGTCCCACCGACAGGCGCGGAG
AGAGGCCTTGAAACACTCGCGGTCCGAAGTGTGCTCCGGTTACTGGCGGG
GGGGTTTTGAATGGTTAATACCGATGGAGATGCAAG back to top
|