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Properties
| Property Name | Value |
|---|
| Product | Yippee-like protein |
| Orig transcript id | gnl|cribi|Naga_100388g2.10441.mrna |
| Orig protein id | gnl|cribi|Naga_100388g2.10441 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1263307..1264924 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2252 ID=rna2252|Name=rna2252|organism=Nannochloropsis gaditana|type=mRNA|length=857bp
AGCCATCACGCAACGCAGCCAAAAGCACACGGCCAGCGCCCGGCGTGTAG
TCTAACTCTACAGGTGAACGTGCCATACGAAAACGGGATCTTCAAGCGCT
AGCCTTGGGGTGTGTCTTTTATGACACCACAGAGAGGGCATCGGGTTGGG
CGATGAACTCAGCGACGCACGTACTCGTGGAAAAAAGGGGCGAAACGCCA
CCCCTCAACCCCCTCGCCCTGCGTACTGGCACCATACATCACAGGGAGAC
GCGCACATCTGCCATGTCCTGGACGCATGTGCGCTTTGAGACATCGGTGG
GAAATTTTACTGTCGAGCTCTACTATAAGCATGCTCCAAGGACCTGCCAC
AATTTTGCCGAGCTGGCACGCTCGGGGTATTACAATGGCACCATCTTTCA
CCGCATTATAAAGGACTTCATGATTCAAGGCGGAGATCCCACTGGCACGG
GGCGTGGAGGCGAGTCAATATACGGAGGGAAATTTGAGGACGAGATAACT
CGAGATCTCAAGCATACGGGAGCAGGAGTCGTTTCAATGGCCAATGCGGG
ACCTAACACTAACGGAAGTCAGTTTTTCCTGACCCTCGGTCCCACGCCGT
GGCTCGATGGGAAGCACACAATTTTCGGCCGGATATCTCACGGAATGCCC
ATCGTGCAGAAGCTGGGACTGGTCAAGACGGGGGAAGGGGACAGGCCTTT
GACGGATGTGCGGGTCTTCAAGGCAACACCATTGACCGGGCCGCCAGTCC
AGGCCTGAGGGAGGGCTGGGAGGCATCCGCGACGAAAATGTGGAGTCCGT
GCCTTTCTGGGAAATAAAATTGCAAAGTAATCACCAACCGTCTTGTCTTT
TCCGACC back to topprotein sequence of rna2252 >rna2252-protein ID=rna2252-protein|Name=rna2252|organism=Nannochloropsis gaditana|type=polypeptide|length=318bp
MARSPVDCVDKNYVYDIHRSGWTLGTRAIMATVATSTFSVPPPHGHALFV
NHHGSDVGGSEEHHDYQQPHLQDLQDEQQQQQQQQQQQYEEEEEEEEEEE
EGDGSEEGEEEEAGMVPWWAVQQQHRNLEEGRSDNRYGELREHEYASDEE
EEEDEDEVGEEGRGGGPFVRRTGHVGFASVSRSHRSFPGDGTARTQSQRT
RKKKAKEEEGWRVLQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLL
DDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYK
EGKFILEKVHLVVEEEAW back to topmRNA from alignment at CM002458.1:1263307..1264924+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2252 ID=rna2252|Name=rna2252|organism=Nannochloropsis gaditana|type=mRNA|length=1618bp|location=Sequence derived from alignment at CM002458.1:1263307..1264924+ (Nannochloropsis gaditana)
ATGGCACGTTCACCTGTAGAGTTAGACTACACGCCGGGCGCTGGCCGTGT
GCTTTTGGCTGCGTTGCGTGATGGCTGTGTGTGCGGTGTGCGCGTTGTAG
GGGATCtcgggagcaaggaggctAACAGAAAAAGCCCCCTTCTGTAGCGG
CCCTTTTTTCCGACGCGTGATTTTTTCTTGGGGCCGCCggctctttcctt
ctcttttcccaaCCAGCTGCGTGGATAAAAACTACGTATACGACATCCAC
AGGTCTGGGTGGACCTTGGGGACAAGGGCGATCATGGCTACGGTCGCGAC
TTCAACTTTCTCAGTGCCACCTCCCCATGGTCATGCCCTCTTCGTCAATC
ACCATGGAAGCGACGTGGGGGGTTCGGAGGAACACCATGACTACCAGCAG
CCGCATTTACAAGATTTGCAAGAtgaacagcagcagcagcagcagcagca
gcagcagcagtatgaggaggaggaggaggaggaggaggaggaggaggagg
gcgacgggagcgaggagggggaggaagaggaagcaggaatgGTGCCGTGG
TGGGCGGTGCAGCAACAACACAGGAAtttggaagaaggaaggtcTGACAA
TCGATATGGCGAGCTGCGCGAGCATGAGTACgccagcgacgaggaggaag
aggaggacgaggacgaggtcggggaggagggtaggggcggagggccctTT
GTCAGGTTGGttcgcttcttcttgtcgCCCATTTTGAAGCCTTTGACGAC
TGTGCTCCACAAGGCGCACAGGCCATGTGGGATTTGCGTCGGTAAGCAGG
AGTCATCGCTCCTTTCCCGGGGACGGAACTGCTCGCACGCAGTCgcaaag
gacgaggaagaagaaagcgaaggaggaggagggatggagggtgtTGCAGG
GCCCGCGCGTGTATGCCTGCGGATTCTGTCGGATGCATTTGGCCACGGAC
ATGGAGGTCGTCTCCCGGGTACGGCGGtgcggggagaaagagggaaaggg
gggagagggaaggagggagggcgggagggagggatggagggagtgaggga
gggaggggccgcaCACAGAGGATTTGCTCATTCTTATACGACAATCGTGC
CTGGGTTGTTTCATAGGCATTTCAAGGACGCGGGGGCCGCGCATTTCTTC
TCGATGATGTGTAAGTGGTGgacaccttccttcctccagcctgtcctccc
tcctgccctctcaccctctTATCCCCCTGTGCCCATGCCCCTTCCCAGCG
TGAACGTCTCCTTTGGCCCCTCCGAAGAGCGGCTTCTTATGACGGGGCTC
CACGCGGTCAGCGACGTCTGCTGTGCTGGGTGTCAGACAGTGGTGGGATG
GAAATAcgtaagagggagggagggaggaagggaggaagggagggaggagc
gactAAACAGACAACTATGCATGGCTTTATGGGCGGGGTGGTGCGATGGG
GATGAAAGCGCAGGGTCCGGTCcaggaagaagcgaggcaGGGGTGATGTC
CGGCTGATATCCTCCTTATTGCTCACAGGATAAAGCCTACGAAGCGACTC
AGAAgtacaaggaggggaaatttATCCTGGAGAAGGTCCATttggtcgtg
gaggaggaggcctggtag back to topCoding sequence (CDS) from alignment at CM002458.1:1263307..1264924+ >rna2252 ID=rna2252|Name=rna2252|organism=Nannochloropsis gaditana|type=CDS|length=5742bp|location=Sequence derived from alignment at CM002458.1:1263307..1264924+ (Nannochloropsis gaditana)
ATGGCACGTTCACCTGTAGACTGCGTGGATAAAAACTACGTATACGACAT
CCACAGGTCTGGGTGGACCTTGGGGACAAGGGCGATCATGGCTACGGTCG
CGACTTCAACTTTCTCAGTGCCACCTCCCCATGGTCATGCCCTCTTCGTC
AATCACCATGGAAGCGACGTGGGGGGTTCGGAGGAACACCATGACTACCA
GCAGCCGCATTTACAAGATTTGCAAGAtgaacagcagcagcagcagcagc
agcagcagcagcagtatgaggaggaggaggaggaggaggaggaggaggag
gagggcgacgggagcgaggagggggaggaagaggaagcaggaatgGTGCC
GTGGTGGGCGGTGCAGCAACAACACAGGAAtttggaagaaggaaggtcTG
ACAATCGATATGGCGAGCTGCGCGAGCATGAGTACgccagcgacgaggag
gaagaggaggacgaggacgaggtcggggaggagggtaggggcggagggcc
ctTTGTCAGGCGCACAGGCCATGTGGGATTTGCGTCGGTAAGCAGGAGTC
ATCGCTCCTTTCCCGGGGACGGAACTGCTCGCACGCAGTCgcaaaggacg
aggaagaagaaagcgaaggaggaggagggatggagggtgtTGCAGGGCCC
GCGCGTGTATGCCTGCGGATTCTGTCGGATGCATTTGGCCACGGACATGG
AGGTCGTCTCCCGGGCATTTCAAGGACGCGGGGGCCGCGCATTTCTTCTC
GATGATGTCGTGAACGTCTCCTTTGGCCCCTCCGAAGAGCGGCTTCTTAT
GACGGGGCTCCACGCGGTCAGCGACGTCTGCTGTGCTGGGTGTCAGACAG
TGGTGGGATGGAAATAcGATAAAGCCTACGAAGCGACTCAGAAgtacaag
gaggggaaatttATCCTGGAGAAGGTCCATttggtcgtggaggaggaggc
ctggtagATGGCACGTTCACCTGTAGACTGCGTGGATAAAAACTACGTAT
ACGACATCCACAGGTCTGGGTGGACCTTGGGGACAAGGGCGATCATGGCT
ACGGTCGCGACTTCAACTTTCTCAGTGCCACCTCCCCATGGTCATGCCCT
CTTCGTCAATCACCATGGAAGCGACGTGGGGGGTTCGGAGGAACACCATG
ACTACCAGCAGCCGCATTTACAAGATTTGCAAGAtgaacagcagcagcag
cagcagcagcagcagcagcagtatgaggaggaggaggaggaggaggagga
ggaggaggagggcgacgggagcgaggagggggaggaagaggaagcaggaa
tgGTGCCGTGGTGGGCGGTGCAGCAACAACACAGGAAtttggaagaagga
aggtcTGACAATCGATATGGCGAGCTGCGCGAGCATGAGTACgccagcga
cgaggaggaagaggaggacgaggacgaggtcggggaggagggtaggggcg
gagggccctTTGTCAGGCGCACAGGCCATGTGGGATTTGCGTCGGTAAGC
AGGAGTCATCGCTCCTTTCCCGGGGACGGAACTGCTCGCACGCAGTCgca
aaggacgaggaagaagaaagcgaaggaggaggagggatggagggtgtTGC
AGGGCCCGCGCGTGTATGCCTGCGGATTCTGTCGGATGCATTTGGCCACG
GACATGGAGGTCGTCTCCCGGGCATTTCAAGGACGCGGGGGCCGCGCATT
TCTTCTCGATGATGTCGTGAACGTCTCCTTTGGCCCCTCCGAAGAGCGGC
TTCTTATGACGGGGCTCCACGCGGTCAGCGACGTCTGCTGTGCTGGGTGT
CAGACAGTGGTGGGATGGAAATAcGATAAAGCCTACGAAGCGACTCAGAA
gtacaaggaggggaaatttATCCTGGAGAAGGTCCATttggtcgtggagg
aggaggcctggtagATGGCACGTTCACCTGTAGACTGCGTGGATAAAAAC
TACGTATACGACATCCACAGGTCTGGGTGGACCTTGGGGACAAGGGCGAT
CATGGCTACGGTCGCGACTTCAACTTTCTCAGTGCCACCTCCCCATGGTC
ATGCCCTCTTCGTCAATCACCATGGAAGCGACGTGGGGGGTTCGGAGGAA
CACCATGACTACCAGCAGCCGCATTTACAAGATTTGCAAGAtgaacagca
gcagcagcagcagcagcagcagcagcagtatgaggaggaggaggaggagg
aggaggaggaggaggagggcgacgggagcgaggagggggaggaagaggaa
gcaggaatgGTGCCGTGGTGGGCGGTGCAGCAACAACACAGGAAtttgga
agaaggaaggtcTGACAATCGATATGGCGAGCTGCGCGAGCATGAGTACg
ccagcgacgaggaggaagaggaggacgaggacgaggtcggggaggagggt
aggggcggagggccctTTGTCAGGCGCACAGGCCATGTGGGATTTGCGTC
GGTAAGCAGGAGTCATCGCTCCTTTCCCGGGGACGGAACTGCTCGCACGC
AGTCgcaaaggacgaggaagaagaaagcgaaggaggaggagggatggagg
gtgtTGCAGGGCCCGCGCGTGTATGCCTGCGGATTCTGTCGGATGCATTT
GGCCACGGACATGGAGGTCGTCTCCCGGGCATTTCAAGGACGCGGGGGCC
GCGCATTTCTTCTCGATGATGTCGTGAACGTCTCCTTTGGCCCCTCCGAA
GAGCGGCTTCTTATGACGGGGCTCCACGCGGTCAGCGACGTCTGCTGTGC
TGGGTGTCAGACAGTGGTGGGATGGAAATAcGATAAAGCCTACGAAGCGA
CTCAGAAgtacaaggaggggaaatttATCCTGGAGAAGGTCCATttggtc
gtggaggaggaggcctggtagATGGCACGTTCACCTGTAGACTGCGTGGA
TAAAAACTACGTATACGACATCCACAGGTCTGGGTGGACCTTGGGGACAA
GGGCGATCATGGCTACGGTCGCGACTTCAACTTTCTCAGTGCCACCTCCC
CATGGTCATGCCCTCTTCGTCAATCACCATGGAAGCGACGTGGGGGGTTC
GGAGGAACACCATGACTACCAGCAGCCGCATTTACAAGATTTGCAAGAtg
aacagcagcagcagcagcagcagcagcagcagcagtatgaggaggaggag
gaggaggaggaggaggaggaggagggcgacgggagcgaggagggggagga
agaggaagcaggaatgGTGCCGTGGTGGGCGGTGCAGCAACAACACAGGA
AtttggaagaaggaaggtcTGACAATCGATATGGCGAGCTGCGCGAGCAT
GAGTACgccagcgacgaggaggaagaggaggacgaggacgaggtcgggga
ggagggtaggggcggagggccctTTGTCAGGCGCACAGGCCATGTGGGAT
TTGCGTCGGTAAGCAGGAGTCATCGCTCCTTTCCCGGGGACGGAACTGCT
CGCACGCAGTCgcaaaggacgaggaagaagaaagcgaaggaggaggaggg
atggagggtgtTGCAGGGCCCGCGCGTGTATGCCTGCGGATTCTGTCGGA
TGCATTTGGCCACGGACATGGAGGTCGTCTCCCGGGCATTTCAAGGACGC
GGGGGCCGCGCATTTCTTCTCGATGATGTCGTGAACGTCTCCTTTGGCCC
CTCCGAAGAGCGGCTTCTTATGACGGGGCTCCACGCGGTCAGCGACGTCT
GCTGTGCTGGGTGTCAGACAGTGGTGGGATGGAAATAcGATAAAGCCTAC
GAAGCGACTCAGAAgtacaaggaggggaaatttATCCTGGAGAAGGTCCA
TttggtcgtggaggaggaggcctggtagATGGCACGTTCACCTGTAGACT
GCGTGGATAAAAACTACGTATACGACATCCACAGGTCTGGGTGGACCTTG
GGGACAAGGGCGATCATGGCTACGGTCGCGACTTCAACTTTCTCAGTGCC
ACCTCCCCATGGTCATGCCCTCTTCGTCAATCACCATGGAAGCGACGTGG
GGGGTTCGGAGGAACACCATGACTACCAGCAGCCGCATTTACAAGATTTG
CAAGAtgaacagcagcagcagcagcagcagcagcagcagcagtatgagga
ggaggaggaggaggaggaggaggaggaggagggcgacgggagcgaggagg
gggaggaagaggaagcaggaatgGTGCCGTGGTGGGCGGTGCAGCAACAA
CACAGGAAtttggaagaaggaaggtcTGACAATCGATATGGCGAGCTGCG
CGAGCATGAGTACgccagcgacgaggaggaagaggaggacgaggacgagg
tcggggaggagggtaggggcggagggccctTTGTCAGGCGCACAGGCCAT
GTGGGATTTGCGTCGGTAAGCAGGAGTCATCGCTCCTTTCCCGGGGACGG
AACTGCTCGCACGCAGTCgcaaaggacgaggaagaagaaagcgaaggagg
aggagggatggagggtgtTGCAGGGCCCGCGCGTGTATGCCTGCGGATTC
TGTCGGATGCATTTGGCCACGGACATGGAGGTCGTCTCCCGGGCATTTCA
AGGACGCGGGGGCCGCGCATTTCTTCTCGATGATGTCGTGAACGTCTCCT
TTGGCCCCTCCGAAGAGCGGCTTCTTATGACGGGGCTCCACGCGGTCAGC
GACGTCTGCTGTGCTGGGTGTCAGACAGTGGTGGGATGGAAATAcGATAA
AGCCTACGAAGCGACTCAGAAgtacaaggaggggaaatttATCCTGGAGA
AGGTCCATttggtcgtggaggaggaggcctggtagATGGCACGTTCACCT
GTAGACTGCGTGGATAAAAACTACGTATACGACATCCACAGGTCTGGGTG
GACCTTGGGGACAAGGGCGATCATGGCTACGGTCGCGACTTCAACTTTCT
CAGTGCCACCTCCCCATGGTCATGCCCTCTTCGTCAATCACCATGGAAGC
GACGTGGGGGGTTCGGAGGAACACCATGACTACCAGCAGCCGCATTTACA
AGATTTGCAAGAtgaacagcagcagcagcagcagcagcagcagcagcagt
atgaggaggaggaggaggaggaggaggaggaggaggagggcgacgggagc
gaggagggggaggaagaggaagcaggaatgGTGCCGTGGTGGGCGGTGCA
GCAACAACACAGGAAtttggaagaaggaaggtcTGACAATCGATATGGCG
AGCTGCGCGAGCATGAGTACgccagcgacgaggaggaagaggaggacgag
gacgaggtcggggaggagggtaggggcggagggccctTTGTCAGGCGCAC
AGGCCATGTGGGATTTGCGTCGGTAAGCAGGAGTCATCGCTCCTTTCCCG
GGGACGGAACTGCTCGCACGCAGTCgcaaaggacgaggaagaagaaagcg
aaggaggaggagggatggagggtgtTGCAGGGCCCGCGCGTGTATGCCTG
CGGATTCTGTCGGATGCATTTGGCCACGGACATGGAGGTCGTCTCCCGGG
CATTTCAAGGACGCGGGGGCCGCGCATTTCTTCTCGATGATGTCGTGAAC
GTCTCCTTTGGCCCCTCCGAAGAGCGGCTTCTTATGACGGGGCTCCACGC
GGTCAGCGACGTCTGCTGTGCTGGGTGTCAGACAGTGGTGGGATGGAAAT
AcGATAAAGCCTACGAAGCGACTCAGAAgtacaaggaggggaaatttATC
CTGGAGAAGGTCCATttggtcgtggaggaggaggcctggtag back to top
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