EWM28430.1, cds2244 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|585110820|gb|EWM28430.1| (Yippee-like protein [Nannochloropsis gaditana]) HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0 Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0 Query: 1 MARSPVDCVDKNYVYDIHRSGWTLGTRAIMATVATSTFSVPPPHGHALFVNHHGSDVGGSEEHHDYQQPHLQDLQDEQQQQQQQQQQQYEEEEEEEEEEEEGDGSEEGEEEEAGMVPWWAVQQQHRNLEEGRSDNRYGELREHEYASDEEEEEDEDEVGEEGRGGGPFVRRTGHVGFASVSRSHRSFPGDGTARTQSQRTRKKKAKEEEGWRVLQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEEEAW 318 MARSPVDCVDKNYVYDIHRSGWTLGTRAIMATVATSTFSVPPPHGHALFVNHHGSDVGGSEEHHDYQQPHLQDLQDEQQQQQQQQQQQYEEEEEEEEEEEEGDGSEEGEEEEAGMVPWWAVQQQHRNLEEGRSDNRYGELREHEYASDEEEEEDEDEVGEEGRGGGPFVRRTGHVGFASVSRSHRSFPGDGTARTQSQRTRKKKAKEEEGWRVLQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEEEAW Sbjct: 1 MARSPVDCVDKNYVYDIHRSGWTLGTRAIMATVATSTFSVPPPHGHALFVNHHGSDVGGSEEHHDYQQPHLQDLQDEQQQQQQQQQQQYEEEEEEEEEEEEGDGSEEGEEEEAGMVPWWAVQQQHRNLEEGRSDNRYGELREHEYASDEEEEEDEDEVGEEGRGGGPFVRRTGHVGFASVSRSHRSFPGDGTARTQSQRTRKKKAKEEEGWRVLQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEEEAW 318
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|1072236358|gb|OEU21086.1| (yippee-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 145.591 bits (366), Expect = 1.109e-37 Identity = 64/129 (49.61%), Postives = 90/129 (69.77%), Query Frame = 0 Query: 190 DGTARTQSQRTRKKKAKEEEGWRVLQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEEEAW 318 D AR QS+ RK + L GP++Y C CR HL + E++S++F GR GRA+L DD VNV+ GP+E+R+L+TGLH+V D+ C C+ +VGW Y +AYE +QKYKEGKFI+EK++L +EE + Sbjct: 120 DSAARAQSRSARKL----NDSMVYLDGPQIYTCAQCRTHLTSHDEIISKSFHGRHGRAYLFDDCVNVTIGPAEDRILITGLHSVCDIFCKRCKNLVGWTYYRAYEDSQKYKEGKFIVEKINLHLEESDY 244
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|976902018|gb|KVH89979.1| (Yippee-like protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 139.428 bits (350), Expect = 8.118e-37 Identity = 61/102 (59.80%), Postives = 78/102 (76.47%), Query Frame = 0 Query: 214 LQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEE 315 + GPR+Y+C CR H+A +V+S+AFQGR GRAFL +NVS GP E+R LMTGLH V+DV C+ C+ V+GWKY++AYE +QKYKEGKFILEK +V E Sbjct: 4 MVGPRLYSCCNCRNHVALHDDVISKAFQGRNGRAFLFSHAMNVSMGPKEDRHLMTGLHTVADVFCSDCREVLGWKYERAYEESQKYKEGKFILEKSKIVKEN 105
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|1040852375|ref|XP_017237617.1| (PREDICTED: protein yippee-like At4g27745 [Daucus carota subsp. sativus]) HSP 1 Score: 136.732 bits (343), Expect = 8.474e-37 Identity = 59/99 (59.60%), Postives = 78/99 (78.79%), Query Frame = 0 Query: 216 GPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVE 314 GPR+Y+C CR H+A +++S+AFQGR GRAFL V+N++ G E+R LMTGLH V+D+ CA C V+GWKY++AYE TQKYKEGKFILEK+ +V+E Sbjct: 5 GPRLYSCCKCRNHIALHDDIISKAFQGRNGRAFLFSHVINITVGRKEDRNLMTGLHTVADISCADCCEVLGWKYERAYEPTQKYKEGKFILEKLKIVIE 103
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|302842771|ref|XP_002952928.1| (hypothetical protein VOLCADRAFT_82034 [Volvox carteri f. nagariensis] >gi|300261639|gb|EFJ45850.1| hypothetical protein VOLCADRAFT_82034 [Volvox carteri f. nagariensis]) HSP 1 Score: 136.732 bits (343), Expect = 9.932e-37 Identity = 59/105 (56.19%), Postives = 81/105 (77.14%), Query Frame = 0 Query: 214 LQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEEEAW 318 L GPR+Y+C CR H A +++S+AFQGR GRA+L+++ VNVS GP EER+L+TGLH V+D+ C C TV+GWKY+ A+E +QKYKEGK+I+EK V++E W Sbjct: 9 LSGPRIYSCATCRAHAADHDDIISKAFQGRHGRAYLINNAVNVSLGPREERVLITGLHTVADIYCTSCNTVLGWKYEHAFEESQKYKEGKYIIEKAK-VMKEGNW 112
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|658041878|ref|XP_008356553.1| (PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|658041880|ref|XP_008356554.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|658041882|ref|XP_008356555.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|1039918972|ref|XP_017183572.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|1039918974|ref|XP_017183573.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|1039918978|ref|XP_017183574.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica]) HSP 1 Score: 135.576 bits (340), Expect = 2.934e-36 Identity = 61/102 (59.80%), Postives = 76/102 (74.51%), Query Frame = 0 Query: 214 LQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEE 315 L GPR+Y+C CR H+A +V+S+AFQGR GRAFL +N++ GP E+R LMTGLH V+DV C C V+GWKY++AYE TQKYKEGKFILEK +V E Sbjct: 4 LVGPRLYSCCNCRNHVALHBDVISKAFQGRNGRAFLFSHAMNITVGPKEDRQLMTGLHTVADVSCCDCHEVLGWKYERAYEQTQKYKEGKFILEKSKIVKEN 105
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|658031593|ref|XP_008351275.1| (PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|658031595|ref|XP_008351276.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|658031597|ref|XP_008351277.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|658031599|ref|XP_008351278.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|1039911311|ref|XP_017182117.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica] >gi|1039911315|ref|XP_017182118.1| PREDICTED: protein yippee-like At4g27745 [Malus domestica]) HSP 1 Score: 135.191 bits (339), Expect = 3.372e-36 Identity = 61/102 (59.80%), Postives = 77/102 (75.49%), Query Frame = 0 Query: 214 LQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEE 315 L GPR+Y+C CR H+A +V+S+AFQGR GRAFL +N++ GP E+R LMTGLH V+DV C C V+GWKY++AYE TQKYKEGKFILEK +V E+ Sbjct: 4 LVGPRLYSCCNCRNHVALHDDVISKAFQGRNGRAFLFSHAMNITVGPKEDRQLMTGLHTVADVSCCDCHEVLGWKYERAYEQTQKYKEGKFILEKSKIVKED 105
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|694355230|ref|XP_009358676.1| (PREDICTED: protein yippee-like At4g27745 [Pyrus x bretschneideri] >gi|694355233|ref|XP_009358677.1| PREDICTED: protein yippee-like At4g27745 [Pyrus x bretschneideri] >gi|694355237|ref|XP_009358678.1| PREDICTED: protein yippee-like At4g27745 [Pyrus x bretschneideri] >gi|694355240|ref|XP_009358679.1| PREDICTED: protein yippee-like At4g27745 [Pyrus x bretschneideri] >gi|694355243|ref|XP_009358680.1| PREDICTED: protein yippee-like At4g27745 [Pyrus x bretschneideri] >gi|1079219131|ref|XP_018503482.1| PREDICTED: protein yippee-like At4g27745 [Pyrus x bretschneideri] >gi|1079219135|ref|XP_018503483.1| PREDICTED: protein yippee-like At4g27745 [Pyrus x bretschneideri] >gi|1079219137|ref|XP_018503484.1| PREDICTED: protein yippee-like At4g27745 [Pyrus x bretschneideri]) HSP 1 Score: 134.806 bits (338), Expect = 4.702e-36 Identity = 61/102 (59.80%), Postives = 77/102 (75.49%), Query Frame = 0 Query: 214 LQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEE 315 L GPR+Y+C CR H+A +V+S+AFQGR GRAFL +N++ GP E+R LMTGLH V+DV C C V+GWKY++AYE TQKYKEGKFILEK +V E+ Sbjct: 4 LVGPRLYSCCNCRNHVALHDDVISKAFQGRNGRAFLFSHAMNITVGPKEDRQLMTGLHTVADVSCCDCHEVLGWKYERAYEQTQKYKEGKFILEKSKIVKED 105
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|1098796915|ref|XP_018859935.1| (PREDICTED: protein yippee-like At4g27745 [Juglans regia] >gi|1098796917|ref|XP_018859936.1| PREDICTED: protein yippee-like At4g27745 [Juglans regia]) HSP 1 Score: 134.42 bits (337), Expect = 6.146e-36 Identity = 60/102 (58.82%), Postives = 77/102 (75.49%), Query Frame = 0 Query: 214 LQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEE 315 L GPR+Y+C CR H+A +V+S++FQGR GRAFL +N++ GP E+R LMTGLH V+DV C C+ V+GWKY++AYE TQKYKEGKFILEK +V E Sbjct: 4 LVGPRLYSCCNCRNHVALHDDVISKSFQGRNGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVSCCDCRVVLGWKYERAYEETQKYKEGKFILEKSRIVKEN 105
BLAST of EWM28430.1 vs. NCBI_GenBank
Match: gi|1098812964|ref|XP_018812586.1| (PREDICTED: protein yippee-like At4g27745 [Juglans regia] >gi|1098812966|ref|XP_018812587.1| PREDICTED: protein yippee-like At4g27745 [Juglans regia] >gi|1098812968|ref|XP_018812588.1| PREDICTED: protein yippee-like At4g27745 [Juglans regia]) HSP 1 Score: 134.42 bits (337), Expect = 6.335e-36 Identity = 58/102 (56.86%), Postives = 77/102 (75.49%), Query Frame = 0 Query: 214 LQGPRVYACGFCRMHLATDMEVVSRAFQGRGGRAFLLDDVVNVSFGPSEERLLMTGLHAVSDVCCAGCQTVVGWKYDKAYEATQKYKEGKFILEKVHLVVEE 315 + GPRVY+C CR H++ +++S+AFQGR GRAFL +N+ GP E+R L+TGLH V+D+CCA C V+GWKY++AYEA QKYKEGKFI EK+ +V E Sbjct: 5 IAGPRVYSCCNCRSHVSLHDDIISKAFQGRHGRAFLFTHAMNIVVGPKEDRHLLTGLHTVADICCATCDEVLGWKYERAYEALQKYKEGKFIFEKLKIVKEN 106 The following BLAST results are available for this feature:
BLAST of EWM28430.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|