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Properties
| Property Name | Value |
|---|
| Product | peptidyl-prolyl cis-trans isomerase ppi1 |
| Orig transcript id | gnl|cribi|Naga_100388g1.10440.mrna |
| Orig protein id | gnl|cribi|Naga_100388g1.10440 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1261580..1263382 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2251 ID=rna2251|Name=rna2251|organism=Nannochloropsis gaditana|type=mRNA|length=483bp
ATGTCTGGAGGGCCGAAGGAAAAGCAGCATGTGAAGACTCAGGCGGGCGC
CGACGACGGGAAACGGCGGCGGAAGGAGCACAAAGCGAAACAACCGCTAA
GTCTGCAGCAGTCGAATGGAGGGAGAGGCGGGGGAAGAGGGGGAGGGAGC
GATGTAGGTCGGGGGCCCAAGGCAGGCATGCCGGCTGGGAAAGCGTTCGC
TGTCCAGGGGGTGGAGGAGCGGAAGCGAGGGTGCGGGAAAACGAACGGAC
ACGGAGGCCGGGGCCTCGCGAAGCCCCGACAGGAAGCAGGGGGAACATCG
CAGCCGCAGAGACTCGCACAGGCACTGCCACAGCCACACTTGTCTCTCCC
GGACTCTCGGGCGAAGGAGGGGAAGGGCGACAGGAGAAGGGGAAAAGCAC
ACGGAAGGTGTGAGATTTTCCTGACTCCTGCGCGCGAGGATCGGGCAATA
GAAATACAATCGCCGCGAACAGGAGAGAGTTAG back to topprotein sequence of rna2251 >rna2251-protein ID=rna2251-protein|Name=rna2251|organism=Nannochloropsis gaditana|type=polypeptide|length=201bp
MNSATHVLVEKRGETPPLNPLALRTGTIHHRETRTSAMSWTHVRFETSVG
NFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTG
RGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPW
LDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLTGPPVQ
A back to topmRNA from alignment at CM002458.1:1261580..1263382- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2251 ID=rna2251|Name=rna2251|organism=Nannochloropsis gaditana|type=mRNA|length=1803bp|location=Sequence derived from alignment at CM002458.1:1261580..1263382- (Nannochloropsis gaditana)
AGCCATCACGCAACGCAGCCAAAAGCACACGGCCAGCGCCCGGCGTGTAG
TCTAACTCTACAGGTGAACGTGCCATACGAAAACGGGATCTTCAAGCGCT
AGCCTTGGGGTGTGTCTTTTATGACACCACAGAGAGGGCATCGGGTTGGG
CGATGAACTCAGCGACGCACGTACTCGTGGAAAAAAGGGGCGAAACGCCA
CCCCTCAACCCCCTCGCCCTGCGTACTGGCACCATACATCACAGGGAGAC
GCGCACATCTGCCATGTCCTGGACGCATGTGCGCTTTGAGACATCGGTGG
TGAGTATGGAGGAAGATAGTTGGGGTGGTAAAGGGAAAGAGTTCAGGGTC
ACGGGGAAGGCGCTTGAGGAGTTGATTTGATCCTTTTTGACCGACCAAAA
TGGTGTGTTTTAAATCGACTTGATACAGGGAAATTTTACTGTCGAGCTCT
ACTATAAGCATGCTCCAAGGACCTGCCACAATTTTGCCGGTATGTTCCAT
TCGCACAATTCCAGTTGCTCGTCTTCCCTCTCACGTTGGGGTCGGTTTGC
TTTCCTGTCCACTTAAAGAGCTGGCACGCTCGGGGTATTACAATGGCACC
ATCTTTCACCGCATTATAAAGGTAAGTGGAAGATTAATGGAAGCATGGAA
TGGATCAGGATCGTTCCACATGGCAGAGGCTGTCTCTGGGATGCCAGCCT
GTAGTGACAACTTCCTTTTCCCCTGAACTCTCCACTTGATTCAAGGACTT
CATGATTCAAGGCGGAGATCCCACTGGCACGGGGCGTGGAGGCGAGTCAA
TATACGGGTAAGAGCGCATGAAGAGGTTCATGTGGAGGGAGCTTGAAAGC
AACCACAATATCTATGGGAGTGACTGACTTCGCTGTGTCCACACAGAGGG
AAATTTGAGGACGAGATAACTCGAGATCTCAAGCATACGGGAGCAGGAGT
CGTTTCAATGGTACGTGTTTACGAGGCATATTTTCTTTTTAATTTGCCGC
TTCAAGAGGCCACTCAAATCGACCTGGTGTGCTGCTATTCTTCCCTTTTC
CCCTACACACATGTCCGCTTCTTTTTCCGATCTGACCTTTTTCTCGCAGG
GTGGTGTTCCCCTCTTCGTACTTCGTTGTATTTCTATTTCGCTCCCCTGG
GGGGCTTTGCGATATCCGAGAAGACCACCGTTTGCTTCCTTTCTCTATAG
ATATGTCCCCTTAGCTTTCCATTGTTTACGATTTTCCCTCGGCCACCCGC
TCGATTGTGCATCTCATTCTGTGCTTATTCACCCCCTACCCTTTCCTCTT
CTCTTCTTCCACGCATCCCTAGGCCAATGCGGGACCTAACACTAACGGAA
GTCAGTTTTTCCTGACCCTCGGTCCCACGCCGTGGCTCGATGGGAAGCAC
ACAATTTTCGGCCGGATATCTCACGGAATGCCCATCGTGCAGAAGCTGGG
ACTGGTCAAGACGGGGGAAGGGGACAGGTGACGGGGCTTTCCAAAGCGGG
GGAGGAGGGGGCAAAGGGCGAATATTAGCGATGCGTGGCGGTTGTCAAGA
GCAGGACGCAGGTTGAGAGGAGATTTTCATGCTATCAATGTCCATCATGC
ACAAGTTTTGCCCCCGTTCCCCTTTCTTTTTCTCTCCTAGGCCTTTGACG
GATGTGCGGGTCTTCAAGGCAACACCATTGACCGGGCCGCCAGTCCAGGC
CTGAGGGAGGGCTGGGAGGCATCCGCGACGAAAATGTGGAGTCCGTGCCT
TTCTGGGAAATAAAATTGCAAAGTAATCACCAACCGTCTTGTCTTTTCCG
ACC back to topCoding sequence (CDS) from alignment at CM002458.1:1261580..1263382- >rna2251 ID=rna2251|Name=rna2251|organism=Nannochloropsis gaditana|type=CDS|length=4242bp|location=Sequence derived from alignment at CM002458.1:1261580..1263382- (Nannochloropsis gaditana)
GCCTTTGACGGATGTGCGGGTCTTCAAGGCAACACCATTGACCGGGCCGC
CAGTCCAGGCCTGAGCCAATGCGGGACCTAACACTAACGGAAGTCAGTTT
TTCCTGACCCTCGGTCCCACGCCGTGGCTCGATGGGAAGCACACAATTTT
CGGCCGGATATCTCACGGAATGCCCATCGTGCAGAAGCTGGGACTGGTCA
AGACGGGGGAAGGGGACAGAGGGAAATTTGAGGACGAGATAACTCGAGAT
CTCAAGCATACGGGAGCAGGAGTCGTTTCAATGGACTTCATGATTCAAGG
CGGAGATCCCACTGGCACGGGGCGTGGAGGCGAGTCAATATACGGAGCTG
GCACGCTCGGGGTATTACAATGGCACCATCTTTCACCGCATTATAAAGGG
AAATTTTACTGTCGAGCTCTACTATAAGCATGCTCCAAGGACCTGCCACA
ATTTTGCCGATGAACTCAGCGACGCACGTACTCGTGGAAAAAAGGGGCGA
AACGCCACCCCTCAACCCCCTCGCCCTGCGTACTGGCACCATACATCACA
GGGAGACGCGCACATCTGCCATGTCCTGGACGCATGTGCGCTTTGAGACA
TCGGTGGCCTTTGACGGATGTGCGGGTCTTCAAGGCAACACCATTGACCG
GGCCGCCAGTCCAGGCCTGAGCCAATGCGGGACCTAACACTAACGGAAGT
CAGTTTTTCCTGACCCTCGGTCCCACGCCGTGGCTCGATGGGAAGCACAC
AATTTTCGGCCGGATATCTCACGGAATGCCCATCGTGCAGAAGCTGGGAC
TGGTCAAGACGGGGGAAGGGGACAGAGGGAAATTTGAGGACGAGATAACT
CGAGATCTCAAGCATACGGGAGCAGGAGTCGTTTCAATGGACTTCATGAT
TCAAGGCGGAGATCCCACTGGCACGGGGCGTGGAGGCGAGTCAATATACG
GAGCTGGCACGCTCGGGGTATTACAATGGCACCATCTTTCACCGCATTAT
AAAGGGAAATTTTACTGTCGAGCTCTACTATAAGCATGCTCCAAGGACCT
GCCACAATTTTGCCGATGAACTCAGCGACGCACGTACTCGTGGAAAAAAG
GGGCGAAACGCCACCCCTCAACCCCCTCGCCCTGCGTACTGGCACCATAC
ATCACAGGGAGACGCGCACATCTGCCATGTCCTGGACGCATGTGCGCTTT
GAGACATCGGTGGCCTTTGACGGATGTGCGGGTCTTCAAGGCAACACCAT
TGACCGGGCCGCCAGTCCAGGCCTGAGCCAATGCGGGACCTAACACTAAC
GGAAGTCAGTTTTTCCTGACCCTCGGTCCCACGCCGTGGCTCGATGGGAA
GCACACAATTTTCGGCCGGATATCTCACGGAATGCCCATCGTGCAGAAGC
TGGGACTGGTCAAGACGGGGGAAGGGGACAGAGGGAAATTTGAGGACGAG
ATAACTCGAGATCTCAAGCATACGGGAGCAGGAGTCGTTTCAATGGACTT
CATGATTCAAGGCGGAGATCCCACTGGCACGGGGCGTGGAGGCGAGTCAA
TATACGGAGCTGGCACGCTCGGGGTATTACAATGGCACCATCTTTCACCG
CATTATAAAGGGAAATTTTACTGTCGAGCTCTACTATAAGCATGCTCCAA
GGACCTGCCACAATTTTGCCGATGAACTCAGCGACGCACGTACTCGTGGA
AAAAAGGGGCGAAACGCCACCCCTCAACCCCCTCGCCCTGCGTACTGGCA
CCATACATCACAGGGAGACGCGCACATCTGCCATGTCCTGGACGCATGTG
CGCTTTGAGACATCGGTGGCCTTTGACGGATGTGCGGGTCTTCAAGGCAA
CACCATTGACCGGGCCGCCAGTCCAGGCCTGAGCCAATGCGGGACCTAAC
ACTAACGGAAGTCAGTTTTTCCTGACCCTCGGTCCCACGCCGTGGCTCGA
TGGGAAGCACACAATTTTCGGCCGGATATCTCACGGAATGCCCATCGTGC
AGAAGCTGGGACTGGTCAAGACGGGGGAAGGGGACAGAGGGAAATTTGAG
GACGAGATAACTCGAGATCTCAAGCATACGGGAGCAGGAGTCGTTTCAAT
GGACTTCATGATTCAAGGCGGAGATCCCACTGGCACGGGGCGTGGAGGCG
AGTCAATATACGGAGCTGGCACGCTCGGGGTATTACAATGGCACCATCTT
TCACCGCATTATAAAGGGAAATTTTACTGTCGAGCTCTACTATAAGCATG
CTCCAAGGACCTGCCACAATTTTGCCGATGAACTCAGCGACGCACGTACT
CGTGGAAAAAAGGGGCGAAACGCCACCCCTCAACCCCCTCGCCCTGCGTA
CTGGCACCATACATCACAGGGAGACGCGCACATCTGCCATGTCCTGGACG
CATGTGCGCTTTGAGACATCGGTGGCCTTTGACGGATGTGCGGGTCTTCA
AGGCAACACCATTGACCGGGCCGCCAGTCCAGGCCTGAGCCAATGCGGGA
CCTAACACTAACGGAAGTCAGTTTTTCCTGACCCTCGGTCCCACGCCGTG
GCTCGATGGGAAGCACACAATTTTCGGCCGGATATCTCACGGAATGCCCA
TCGTGCAGAAGCTGGGACTGGTCAAGACGGGGGAAGGGGACAGAGGGAAA
TTTGAGGACGAGATAACTCGAGATCTCAAGCATACGGGAGCAGGAGTCGT
TTCAATGGACTTCATGATTCAAGGCGGAGATCCCACTGGCACGGGGCGTG
GAGGCGAGTCAATATACGGAGCTGGCACGCTCGGGGTATTACAATGGCAC
CATCTTTCACCGCATTATAAAGGGAAATTTTACTGTCGAGCTCTACTATA
AGCATGCTCCAAGGACCTGCCACAATTTTGCCGATGAACTCAGCGACGCA
CGTACTCGTGGAAAAAAGGGGCGAAACGCCACCCCTCAACCCCCTCGCCC
TGCGTACTGGCACCATACATCACAGGGAGACGCGCACATCTGCCATGTCC
TGGACGCATGTGCGCTTTGAGACATCGGTGGCCTTTGACGGATGTGCGGG
TCTTCAAGGCAACACCATTGACCGGGCCGCCAGTCCAGGCCTGAGCCAAT
GCGGGACCTAACACTAACGGAAGTCAGTTTTTCCTGACCCTCGGTCCCAC
GCCGTGGCTCGATGGGAAGCACACAATTTTCGGCCGGATATCTCACGGAA
TGCCCATCGTGCAGAAGCTGGGACTGGTCAAGACGGGGGAAGGGGACAGA
GGGAAATTTGAGGACGAGATAACTCGAGATCTCAAGCATACGGGAGCAGG
AGTCGTTTCAATGGACTTCATGATTCAAGGCGGAGATCCCACTGGCACGG
GGCGTGGAGGCGAGTCAATATACGGAGCTGGCACGCTCGGGGTATTACAA
TGGCACCATCTTTCACCGCATTATAAAGGGAAATTTTACTGTCGAGCTCT
ACTATAAGCATGCTCCAAGGACCTGCCACAATTTTGCCGATGAACTCAGC
GACGCACGTACTCGTGGAAAAAAGGGGCGAAACGCCACCCCTCAACCCCC
TCGCCCTGCGTACTGGCACCATACATCACAGGGAGACGCGCACATCTGCC
ATGTCCTGGACGCATGTGCGCTTTGAGACATCGGTGGCCTTTGACGGATG
TGCGGGTCTTCAAGGCAACACCATTGACCGGGCCGCCAGTCCAGGCCTGA
GCCAATGCGGGACCTAACACTAACGGAAGTCAGTTTTTCCTGACCCTCGG
TCCCACGCCGTGGCTCGATGGGAAGCACACAATTTTCGGCCGGATATCTC
ACGGAATGCCCATCGTGCAGAAGCTGGGACTGGTCAAGACGGGGGAAGGG
GACAGAGGGAAATTTGAGGACGAGATAACTCGAGATCTCAAGCATACGGG
AGCAGGAGTCGTTTCAATGGACTTCATGATTCAAGGCGGAGATCCCACTG
GCACGGGGCGTGGAGGCGAGTCAATATACGGAGCTGGCACGCTCGGGGTA
TTACAATGGCACCATCTTTCACCGCATTATAAAGGGAAATTTTACTGTCG
AGCTCTACTATAAGCATGCTCCAAGGACCTGCCACAATTTTGCCGATGAA
CTCAGCGACGCACGTACTCGTGGAAAAAAGGGGCGAAACGCCACCCCTCA
ACCCCCTCGCCCTGCGTACTGGCACCATACATCACAGGGAGACGCGCACA
TCTGCCATGTCCTGGACGCATGTGCGCTTTGAGACATCGGTG back to top
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