EWM28429.1, cds2243 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|585110819|gb|EWM28429.1| (peptidyl-prolyl cis-trans isomerase ppi1 [Nannochloropsis gaditana]) HSP 1 Score: 414.846 bits (1065), Expect = 1.117e-146 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
Query: 1 MNSATHVLVEKRGETPPLNPLALRTGTIHHRETRTSAMSWTHVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLTGPPVQA 201
MNSATHVLVEKRGETPPLNPLALRTGTIHHRETRTSAMSWTHVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLTGPPVQA
Sbjct: 1 MNSATHVLVEKRGETPPLNPLALRTGTIHHRETRTSAMSWTHVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLTGPPVQA 201
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|1173961354|gb|OQS07391.1| (peptidyl-prolyl cis-trans isomerase ppi1 [Thraustotheca clavata]) HSP 1 Score: 258.455 bits (659), Expect = 1.636e-85 Identity = 115/153 (75.16%), Postives = 138/153 (90.20%), Query Frame = 0
Query: 41 THVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATP 193
T+V FET++G+FT+ELY +HAPRTC N AELA+ GYY+ TIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEI+R+LKHTGAGV+SMANAGPNTNGSQFF+TL PTPWLDGKHT+FGRIS GM +++++GLV+TG D+P D+R+ +A P
Sbjct: 3 TYVDFETTMGSFTMELYTQHAPRTCKNIAELAKRGYYDNTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEISRELKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTVFGRISEGMSVIKRMGLVQTGANDKPRDDIRILRAYP 155
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|669166354|ref|XP_008618739.1| (peptidyl-prolyl cis-trans isomerase-like 1 [Saprolegnia diclina VS20] >gi|530729567|gb|EQC27809.1| peptidyl-prolyl cis-trans isomerase-like 1 [Saprolegnia diclina VS20]) HSP 1 Score: 258.455 bits (659), Expect = 1.788e-85 Identity = 116/152 (76.32%), Postives = 136/152 (89.47%), Query Frame = 0
Query: 42 HVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATP 193
+V FET++G FT+ELY +HAPRTC N ELAR GYY+ TIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEI+RDLKHTGAGV+SMANAGPNTNGSQFF+TL PTPWLDGKHT+FGRIS GM +++++GLV+TG D+P D+R+ +ATP
Sbjct: 4 YVDFETTMGTFTMELYTQHAPRTCKNITELARRGYYDNTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEISRDLKHTGAGVLSMANAGPNTNGSQFFITLAPTPWLDGKHTVFGRISEGMGVIKRMGLVQTGANDKPRDDIRIVRATP 155
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|813134093|ref|XP_012198039.1| (peptidyl-prolyl cis-trans isomerase-like 1 [Saprolegnia parasitica CBS 223.65] >gi|641537591|gb|KDO31444.1| peptidyl-prolyl cis-trans isomerase-like 1 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 257.684 bits (657), Expect = 2.992e-85 Identity = 115/152 (75.66%), Postives = 136/152 (89.47%), Query Frame = 0
Query: 42 HVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATP 193
+V FET++G FT+ELY +HAPRTC N ELAR GYY+ TIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEI+RDLKHTGAG++SMANAGPNTNGSQFF+TL PTPWLDGKHT+FGRIS GM +++++GLV+TG D+P D+R+ +ATP
Sbjct: 4 YVDFETTMGTFTMELYTQHAPRTCKNITELARRGYYDNTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEISRDLKHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTVFGRISEGMGVIKRMGLVQTGANDKPRDDIRIVRATP 155
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|219111731|ref|XP_002177617.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410502|gb|EEC50431.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 258.07 bits (658), Expect = 6.196e-85 Identity = 117/160 (73.12%), Postives = 137/160 (85.62%), Query Frame = 0
Query: 40 WTHVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLTGPPV 199
WTHV FETS+G+F++ELY+KH PRTC+N A LA GYYNGTIFHRII+DFMIQGGDPTGTGRGGESIYGGKF DEITR+LKH GAGVVSMANAGPNTNGSQFF++L PTP+LDGKHT+ GR+ GM +VQ++G+V T DRPL V ++ ATPL PP+
Sbjct: 8 WTHVEFETSIGSFSIELYHKHTPRTCYNIAALAYQGYYNGTIFHRIIRDFMIQGGDPTGTGRGGESIYGGKFADEITRNLKHVGAGVVSMANAGPNTNGSQFFISLKPTPFLDGKHTVLGRVYSGMSVVQRMGMVATDGEDRPLHPVTIYTATPLREPPL 167
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|159488693|ref|XP_001702337.1| (peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Chlamydomonas reinhardtii] >gi|158271131|gb|EDO96957.1| peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Chlamydomonas reinhardtii]) HSP 1 Score: 256.529 bits (654), Expect = 8.753e-85 Identity = 115/152 (75.66%), Postives = 138/152 (90.79%), Query Frame = 0
Query: 43 VRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPL 194
V+ +TS+G+FTVELYYKHAPRTC NF ELA+ GYY+GTIFHRII+DFM QGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAG++SMAN+GPNTNGSQFF+TL PTPWLDGKHTIFGR++ GM ++++LG V+T DRP+T+V+V +A P+
Sbjct: 6 VQIDTSMGSFTVELYYKHAPRTCKNFEELAKKGYYDGTIFHRIIRDFMCQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVTSGMAVIKRLGNVQTDNLDRPVTEVKVIRARPV 157
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|1173950460|gb|OQR98418.1| (peptidyl-prolyl cis-trans isomerase ppi1 [Achlya hypogyna]) HSP 1 Score: 255.758 bits (652), Expect = 1.744e-84 Identity = 114/151 (75.50%), Postives = 136/151 (90.07%), Query Frame = 0
Query: 41 THVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKA 191
T+V FET++G FT+ELY +HAPRTC N +ELAR GYY+ TIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEI+RDLKHTGAG++SMANAGPNTNGSQFF+TL PTPWLDGKHT+FGRIS GM +++++GLV+TG D+P D+R+ +A
Sbjct: 3 TYVDFETTMGTFTMELYTQHAPRTCKNISELARRGYYDNTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEISRDLKHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTVFGRISEGMGVIKRMGLVQTGANDKPRDDIRIVRA 153
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|299115268|emb|CBN75545.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 256.144 bits (653), Expect = 2.020e-84 Identity = 116/158 (73.42%), Postives = 136/158 (86.08%), Query Frame = 0
Query: 41 THVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLTGPP 198
THV F+TSVG+FTVELY +HAP++CHN ELAR GYY+ TIFHR+IKDFM+QGGDPTGTGRGGES +GGKFEDEI RDLKHTGAGVVSMAN+GPNTNGSQFF+TLGPTPWLDGKHTI GRIS GM +V+++G+V D+PL D+R+ +A PL P
Sbjct: 7 THVHFQTSVGSFTVELYSQHAPKSCHNMGELARRGYYDNTIFHRVIKDFMVQGGDPTGTGRGGESSFGGKFEDEIRRDLKHTGAGVVSMANSGPNTNGSQFFVTLGPTPWLDGKHTILGRISSGMKVVRRMGMVAVNSEDKPLQDMRIVRAKPLVLAP 164
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|1214701566|gb|OWZ13923.1| (Peptidyl-prolyl cis-trans isomerase ppi1 [Phytophthora megakarya]) HSP 1 Score: 254.603 bits (649), Expect = 6.923e-84 Identity = 116/155 (74.84%), Postives = 136/155 (87.74%), Query Frame = 0
Query: 41 THVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLT 195
THV FET+VG FT+ELY +HAPRTC N AELAR GYYN TIFHR+IKDFMIQGGDPTGTGRGGESIYG KF+DEIT++LKHTGAGV+SMAN+GPNTNGSQFF+TL PTPWLDGKHT+FGRIS GM ++Q++GLV TG DRP ++ V +A P++
Sbjct: 11 THVVFETTVGEFTMELYTEHAPRTCWNIAELARRGYYNNTIFHRVIKDFMIQGGDPTGTGRGGESIYGAKFDDEITKELKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTVFGRISAGMKVIQRMGLVPTGANDRPREEIHVKRAYPIS 165
BLAST of EWM28429.1 vs. NCBI_GenBank
Match: gi|675162141|ref|XP_008889955.1| (peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica INRA-310] >gi|566034351|gb|ETI57262.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica P1569] >gi|567972041|gb|ETK97034.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica] >gi|568000366|gb|ETL50386.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica] >gi|568029504|gb|ETM03427.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica] >gi|568060145|gb|ETM56685.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica] >gi|568109205|gb|ETN23812.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica INRA-310] >gi|570338054|gb|ETO86002.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica P1976] >gi|570962068|gb|ETP27047.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica CJ01A1] >gi|570998876|gb|ETP54995.1| peptidyl-prolyl cis-trans isomerase-like 1 [Phytophthora parasitica P10297]) HSP 1 Score: 253.832 bits (647), Expect = 1.210e-83 Identity = 115/155 (74.19%), Postives = 136/155 (87.74%), Query Frame = 0
Query: 41 THVRFETSVGNFTVELYYKHAPRTCHNFAELARSGYYNGTIFHRIIKDFMIQGGDPTGTGRGGESIYGGKFEDEITRDLKHTGAGVVSMANAGPNTNGSQFFLTLGPTPWLDGKHTIFGRISHGMPIVQKLGLVKTGEGDRPLTDVRVFKATPLT 195
THV FET+VG FT+ELY +HAPRTC N AELAR GYYN TIFHRIIKDFMIQGGDPTGTGRGGESIYG KF+DEIT++LKHTGAGV+SMAN+GPNTNGSQFF+TL PTPWLDGKHT+FGRIS GM ++Q++G+V TG DRP ++ + +A P++
Sbjct: 11 THVVFETTVGEFTMELYTEHAPRTCWNIAELARRGYYNNTIFHRIIKDFMIQGGDPTGTGRGGESIYGAKFDDEITKELKHTGAGVLSMANSGPNTNGSQFFITLAPTPWLDGKHTVFGRISSGMKVIQRMGMVPTGANDRPREEIHIKRAYPIS 165 The following BLAST results are available for this feature:
BLAST of EWM28429.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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