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Properties
| Property Name | Value |
|---|
| Product | SANT/Myb domain protein |
| Orig transcript id | gnl|cribi|Naga_100100g17.8920.mrna |
| Orig protein id | gnl|cribi|Naga_100100g17.8920 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:564867..568130 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna224 ID=rna224|Name=rna224|organism=Nannochloropsis gaditana|type=mRNA|length=2622bp
TCTCTTTGTTCCGGGCTTGAAGGGGTACGCTGTCACCGTGCATGGAATGA
CTATGCCATTGAGGCCACTTATACATCGCTTTGGATGGTGTGACGATTAT
GGTAGGTTTCGTGGAAACAGCCCTGGCATTCGTGCAATGAGCTTTACAGA
TTCACTCCAAGCCATAACTGCCGCCAAGGCCTGAAATGAGCTGTCATCCA
ACCTCAAAATATGTAATGCGGTAGCAACAATGCCGTGCTAGACCATTCTT
TTAGTAGCGATTGAGTCTGTGCATGGATGAGAATGACTTCATTGCCTGAT
TAAGATCCTTTTGCAGTAGCATACCCCCCTAAAAGTGCTCTGCAAACGCA
TCTCTATTTCTTCCTTTCAATCCACCTCCAGAGCATTTTCACGGCCCACC
ATGCTAAATAGTACAAGCACCACACTGAGAGGGCCTTTCTCTCTTCTTGT
GGGCAGGATGTCCCTCGTTCGCCGGCCAACGCTGGCGCGCAATGGGCGCG
CGTTTGCCGATAGCAGCAAGTCCACGAAGGACGAGGATAGTGGTTCTCAA
ACTACCATCCACCCTACTCACTCGAATCCTAAGGCAACGCCCGGTGCTGT
CAACTCGCAAAAGCCTGACTTTGACTTGATGGTCATTGGATCTGGTCCAG
CCGCCCAGGCCTGTGCCATCTCCTCCAGCCGTCGCGGGAAAAAAGTGGCC
GTGATCGACAAGCCGGGCATGTTGGGGGGAGTCTGCGTCAATACGGGAAC
CATTCCCTCCAAAACATTCCGGGAGGCCGTCCTCCACCTGACGGGCTACC
GTCACCAGGGCTTCTACGGCAAGTCTTACGCTCCTGCTGGCCGAATCAGC
ATGGAGGGGATCCTGCACCGAGTGTCGATGGTGGTAAAAGGCGAGAAAGA
CGTGATGCGGAACCGATTTCGCCAGTATGGTATCTCGCATATTTACGGCA
CAGCGCACTTTACGGGGGAGGAGAAGACGGTTCAAGTCACCTCCGTGGCG
GTGGAGGAGGAGGAGCGAAAAAGGAAGCGAGCAGTCGGTACCGCAGGCGC
GGGATTGGAAGTGGAGCCTTTTAGCAAGCCTTTCACCACGGAGAAAGCCC
TGGTGGCGGTGGGAACAACGCCAGCACGACGGGCAGACTTCGATTTCGAC
GGTGTACACATTATCGATAGCGACGACCTTTTAAGCGGGTCGCTGCAGCG
GGTGCCTCGGGAGCTCATCGTGGTGGGAGCCGGTGTGATAGGAATGGAGT
ACGCCAGTATGTTCAACGTCATCCCCGGGACACGTGTCACGGTGATTGAT
GGCAGGCCGGACGTGCTCACGTTCGCGGATAAAGAAATCATTCAATCCCT
CGAGTACGAGATGAGACAGAAAGGGGCCCGCTTCTTACTCGGCGAGGAAG
TGCTTAATGCGCGCGTGGAAGGCGACCACGTCGTCGCAAACATGGCGAGT
GGGAAAGTTCTGCGAGGGGACTGCTTGCTGTACACCGTCGGTCGTCAAGG
GAACACGGCTGGCCTCGGCTTGGACAAGGCTGGTGTGGAGGTTAGCAAGC
GAGGGCTGATGACTGTGAATGACAATTATCAAACATCAGTGCCGTGGCTC
TATGCCGCTGGGGACTGCATCGGCTTCCCTGCGCTTGCGTCTACGTCCTC
ACAACAGGGGCGAATGGCGGCCCACCACATGTGGGGGGGAAACGAGGGGG
ATGCACTTAAAGCCTTCGGGGGGTTTCCCTATGGTATCTACACGATCCCG
GAGATATCAATGGTTGGGTACACGGAACAGCAGCTTACGCAGCAAAAAAT
ACCGTACGAAATGGGCGTGGCTCGGTATGACGAACTGGCCAAGGGCCAGA
TGATGGGTGGCAGCAGCGGCATGCTCAAGGTGCTGTTCCACGCGGAAACG
CTGAAGATCCTCGGCGTCCACTGCATGGGCGAAAGCGCGACAGAGATCGT
GCACGTGGGCCAAGTGGCGATGGACATGGGGATGGACATGCATTTCCTGA
CGGAGAACGTCTTCAATTATCCGACGTTCGCCGAATCATACCGTGTGGCA
GCCTTTAACGGCTTAAAACGCCTGGCCTTGGCAGGGTACACCGACGTGTC
ACAACATCAGCACGAAGGTGCAGCTTCACCGTGAGGTGCCTAAGGTAGGA
GGTAATGTAGAAAACTGGAAATGAAATGGTTTAAGAATGAAAACAGATGC
TCTAAGTCTGTGTGGAAAGAAAGGCACAAGCAAACAGCCGTACAAAGTAA
ATGGAAGGTGATATGTTTCCTACACTCCTGCTTCTCTAATCATCACACTG
TATGAGTTTTTTGGGGCATGATTTTACCTTTTTGGTTACGCAAAAAGCGG
CTTCTATAAAATTTAACTCTGCGATAATTTTCCGTATTTGGACACAAACG
TTGAAATTTTCCGAGACCGCCCCTCTGCATCACGACATTTATCGTGTCGA
CGAGCAGAGTCTCCTTCACTTCATGGTCCAATGTGTACTCTCGCGCCAAG
GAAGGAGATGAATTAACCTCCAGCAACCATGGCCGGAGGTCCGAATCTAG
TAAGACATCGAATCCGAATAACTCGAATGTCCCTGGCAGTGGAGGAATAG
AATCCTCTACGCACACTAAACT back to topprotein sequence of rna224 >rna224-protein ID=rna224-protein|Name=rna224|organism=Nannochloropsis gaditana|type=polypeptide|length=606bp
MGIGSEAVAEVGSGTSSAPCGSNSASPMMPVVTASQNAAESVAGSMLPVS
CVASAAIAPQTSSTTVGVAASAPAASPTTSKLHKGTSSMTQLGETGRENT
GRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAK
AKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISP
ALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDA
TAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADS
SSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSGG
DAVKAEERGASILNANIENSDQAQSHRNGEKVAVPNRVAAVKVAGNISAD
SSYITSGASQCVKHPPTTNTIDGKRSNMNSGQSLPTANGRNGAASGRCVT
GRGQQQKKKQPKTQESGNHGKQHLANKHSAPTGDMFQSKAGAGTIVLQGD
INCFASLDPHHVELKEEHSHHELRLEELQQSGVNDDTFAHMDFLANDEAP
VDHHAGHLHTISTHDDVHSHADHDVHMRNYDVFWKDTVPDGDHGLLLDDF
DGGIEF back to topmRNA from alignment at CM002455.1:564867..568130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna224 ID=rna224|Name=rna224|organism=Nannochloropsis gaditana|type=mRNA|length=3264bp|location=Sequence derived from alignment at CM002455.1:564867..568130+ (Nannochloropsis gaditana)
CAGCTGTTCTCTTTCCTATATTGCTGTGTGCTCTTCCCCTGTCTTATTTT
GGTATTGCTCCAGGTCACTATCTTCTTGGAGCTTGTCGCGTGCAAAGTCT
TCGTGAAGGGAAGATCCAGTTTTGATGTCAGGTCGGCTCGCTTTGCTGGT
CTGCCCATTGCGAACAAATACAAATCCTCTTTGGCTTGGGATTGTTTAAG
CACAAATTTGCAGTCTGTCACTTTGCATTCATTGTTCTCGCGTCATTGAC
AGGGGTTGGTGACAGTCCATCACACTGCAATCTTCAGCACAAAGGTCTGG
TCCTCGAGCTACGACAATGGGAATCGGCTCAGAGGCCGTCGCTGAGGTAG
GGAGCGGCACAAGCAGCGCACCGTGTGGCAGCAACTCAGCAAGCCCAATG
ATGCCTGTCGTGACTGCGAGTCAGGTATGGACGCGCACTGGAGCTCGATG
GCGATGTGAAATTTGTGTTGGCATGTCTGTCTCTTGCGCGACGGTCTCTA
GAAGCATCGAATTTTCTCAGTAGatctcctcactcctccttGCTACATGT
ActactttttcctccttttcactaTTGaatgtcctcttcttggctACCCC
CGAGTTCCCTCGATGTGTTGCACATTCTTGCCACGTCCTACGCGGGAGCT
TACCATTTTTTACTGATAGGAGTTGGGGTAGTGTgacctccttcatcccc
ttgTCGCGTCTTTCGAGACAAACATGTAGTGCCCAATATCTTTCAGTGAT
TTTTATGTATTAACTATCTCAGGAATGATAGATTGTCTATTGTGAACTTT
AGACCGAACGTTCAGGCTGGGCATTTTTGACGAgattcttcccctcgtct
tcttaTCAACCCATCAGAACGCGGCTGAGAGCGTAGCAGGCTCTATGCTA
CCTGTAAGTTGCGTGGCCTCCGCTGCGATCGCCCCTCAAACGTCCTCGAC
GACAGTGGGAGTCGCTGCCAGCGCCCCTGCAGCGTCCCCAACGACCTCGA
AGCTGCACAAAGGCACGTCCTCTATGACCCAACTCGGCGAAACCGGTCGA
GAGAACACGGGTCGATGGACTTGCGAGGAACATGTTTTGTTTTTAAAAGG
CTTGGAGATGCACGGGAAAGGCTGGAAAAAAATTGCCAAATTGATTAAAA
CCCGGACCGTTGTCCAGATCCGGACCCACGCGCAGAAATATTTCCAAAAA
TTggcaaaagcaaagaaaaatgGGCACCATGGGGACATGCTTGGAATGGA
AGGCACACGATTCGGGGGAAAGCGTGTGAAGTTCACTGGGAAACGGCGAG
GGTTGGTCTACGGGAGCTACTTGGTCGGTGCGGAGGCGACTTCCGCAGCC
ATCTCTCCTGCCTTGCAGTCCTACATGCCCGGGTCTTGGGCCGGgcgtga
ggaaggggaagcgcTGTCggataaggaggaggacgccgccatCGAGAAAG
GGCTTTATCGATTTCTGTCTCCCGTCGTATTGGACGCTGCGGCGAGTAAC
CTGGACGCGACCGCGCCGGAAGTTTTGCCTCCGAGCACACCGGGAACAGG
AGTGCACGCCAACGGGGTAGTGGGGGCAGACGGCGagacgacggaggagg
atgggagcagCGGCGGGGACAACGTGGACGTCAGTGAGACGACCGATGAC
GCTGACTCCTCATCGGGCGAGCCCCTGCCGCGCTTGGCCCGCGTCACGAA
TGACATGTATGAGCGATGTAGTGTGCCCACCTGGTTTATGAAGGGCGGGG
ATATCGAAGAGCTCTTGGCCGATGCTGCCGCGATCGACTGGCGCGAGGAC
TCCGGGGGAGACGCGGTGAAGGCTGAAGAGCGCGGGGCGAGCATTTTGAA
CGCCAATATTGAGAATTCCGACCAAGCTCAGAGCCACAGGAATGGCGAGA
AAGTGGCCGTTCCGAATAGGGTCGCAGCCGTGAAAGTGGCAGGAAACATT
TCCGCGGACAGTTCTTACATAACATCGGGTGCCAGCCAATGCGTCAAACA
CCCTCCTACGACCAACACTATCGATGGCAAGCGCAGCAACATGAATTCGG
GGCAGTCGCTGCCAACCGCGAATGGACGGAACGGTGCAGCCTCAGGACGA
TGCGTCACAGGGCGTGGACAGcagcaaaagaaaaagcagccaAAAACACA
AGAATCGGGGAACCACGGCAAGCAGCACTTAGCGAACAAGCATAGCGCCC
CTACGGGAGACATGTTCCAGTCAAAGGCAGGCGCTGGCACGATCGTCCTT
CAAGGTGATATCAACTGCTTTGCATCTTTGGACCCGCACCATGTTgagct
gaaggaggagcattCCCACCACGAGCTACGTTTGGAAGAGTTGCAGCAAA
GCGGCGTCAACGATGACACGTTCGCACACATGGATTTCTTGGCGAACGAC
GAGGCGCCCGTGGACCATCACGCAGGCCACCTCCACACCATTTCTACGCA
CGATGACGTGCATAGTCATGCCGACCATGACGTTCATATGCGCAACTATG
ACGTCTTTTGGAAAGATACGGTACCTGACGGCGACCATGGCTTGCTGCTC
GATGATTTTGACGGCGGAATCGAATTTTGAAGGTCCCAGTCTATTGGGGG
GTCATGTAAACGACGGCATGTGAATTGTACGTGTGCAGATTGTGCCTCGA
ATTGATTCTTTTTTAACGCTTTTGACTTGAGGTGCGGAGAGTGAGAAGCG
CTCATCGAAACATTGCAAAGCAAGAAATGAGATGGATGGATTTGCGGAGG
TGGTGTCAGACAAGAATGTGATAAATGGAGGATGCGCTGAAGAATAGAGG
AAAAAACGAGCGTGGAAGAAGGTAACGAACAGAGTGATTCCTTGTAGGGG
TCTGATCCTGGTTCTGTACTGTAAGTAAGGCCGGTTGACATCGAATCACA
GCATGCAAGCAACGTTCGCATCATTCTTAGCGAAGTACGGTGAGACGAGA
ACACTTACATTTTAACGGCACAATGGCGTGAGATCGCTGCAGAGCAAATA
TTCACATTGTAAGTTGCGCATCCGGGAATTTGTTGGAATTAAAGTTCTAT
TTCGTTGTGTCACCGCTCAGGTGGCACATCGCAAGCCTGCTGCCCGACGA
ATTTTAGCGGAGACTCTTAAGAGTTATTGCACACGGCGCCTGCTTCTTTG
TCCGAGTCTCAATTACCGCAGAACTCCAGTTTTCCCCCGCTTGATGTGAA
ATTTCCTCAAGTTTGCGAAGAAGAATGAAAACAAGAGCGCCTTCGCATTT
GGTGACGCTAAATA back to topCoding sequence (CDS) from alignment at CM002455.1:564867..568130+ >rna224 ID=rna224|Name=rna224|organism=Nannochloropsis gaditana|type=CDS|length=3642bp|location=Sequence derived from alignment at CM002455.1:564867..568130+ (Nannochloropsis gaditana)
ATGGGAATCGGCTCAGAGGCCGTCGCTGAGGTAGGGAGCGGCACAAGCAG
CGCACCGTGTGGCAGCAACTCAGCAAGCCCAATGATGCCTGTCGTGACTG
CGAGTCAGAACGCGGCTGAGAGCGTAGCAGGCTCTATGCTACCTGTAAGT
TGCGTGGCCTCCGCTGCGATCGCCCCTCAAACGTCCTCGACGACAGTGGG
AGTCGCTGCCAGCGCCCCTGCAGCGTCCCCAACGACCTCGAAGCTGCACA
AAGGCACGTCCTCTATGACCCAACTCGGCGAAACCGGTCGAGAGAACACG
GGTCGATGGACTTGCGAGGAACATGTTTTGTTTTTAAAAGGCTTGGAGAT
GCACGGGAAAGGCTGGAAAAAAATTGCCAAATTGATTAAAACCCGGACCG
TTGTCCAGATCCGGACCCACGCGCAGAAATATTTCCAAAAATTggcaaaa
gcaaagaaaaatgGGCACCATGGGGACATGCTTGGAATGGAAGGCACACG
ATTCGGGGGAAAGCGTGTGAAGTTCACTGGGAAACGGCGAGGGTTGGTCT
ACGGGAGCTACTTGGTCGGTGCGGAGGCGACTTCCGCAGCCATCTCTCCT
GCCTTGCAGTCCTACATGCCCGGGTCTTGGGCCGGgcgtgaggaagggga
agcgcTGTCggataaggaggaggacgccgccatCGAGAAAGGGCTTTATC
GATTTCTGTCTCCCGTCGTATTGGACGCTGCGGCGAGTAACCTGGACGCG
ACCGCGCCGGAAGTTTTGCCTCCGAGCACACCGGGAACAGGAGTGCACGC
CAACGGGGTAGTGGGGGCAGACGGCGagacgacggaggaggatgggagca
gCGGCGGGGACAACGTGGACGTCAGTGAGACGACCGATGACGCTGACTCC
TCATCGGGCGAGCCCCTGCCGCGCTTGGCCCGCGTCACGAATGACATGTA
TGAGCGATGTAGTGTGCCCACCTGGTTTATGAAGGGCGGGGATATCGAAG
AGCTCTTGGCCGATGCTGCCGCGATCGACTGGCGCGAGGACTCCGGGGGA
GACGCGGTGAAGGCTGAAGAGCGCGGGGCGAGCATTTTGAACGCCAATAT
TGAGAATTCCGACCAAGCTCAGAGCCACAGGAATGGCGAGAAAGTGGCCG
TTCCGAATAGGGTCGCAGCCGTGAAAGTGGCAGGAAACATTTCCGCGGAC
AGTTCTTACATAACATCGGGTGCCAGCCAATGCGTCAAACACCCTCCTAC
GACCAACACTATCGATGGCAAGCGCAGCAACATGAATTCGGGGCAGTCGC
TGCCAACCGCGAATGGACGGAACGGTGCAGCCTCAGGACGATGCGTCACA
GGGCGTGGACAGcagcaaaagaaaaagcagccaAAAACACAAGAATCGGG
GAACCACGGCAAGCAGCACTTAGCGAACAAGCATAGCGCCCCTACGGGAG
ACATGTTCCAGTCAAAGGCAGGCGCTGGCACGATCGTCCTTCAAGGTGAT
ATCAACTGCTTTGCATCTTTGGACCCGCACCATGTTgagctgaaggagga
gcattCCCACCACGAGCTACGTTTGGAAGAGTTGCAGCAAAGCGGCGTCA
ACGATGACACGTTCGCACACATGGATTTCTTGGCGAACGACGAGGCGCCC
GTGGACCATCACGCAGGCCACCTCCACACCATTTCTACGCACGATGACGT
GCATAGTCATGCCGACCATGACGTTCATATGCGCAACTATGACGTCTTTT
GGAAAGATACGGTACCTGACGGCGACCATGGCTTGCTGCTCGATGATTTT
GACGGCGGAATCGAATTTTGAATGGGAATCGGCTCAGAGGCCGTCGCTGA
GGTAGGGAGCGGCACAAGCAGCGCACCGTGTGGCAGCAACTCAGCAAGCC
CAATGATGCCTGTCGTGACTGCGAGTCAGAACGCGGCTGAGAGCGTAGCA
GGCTCTATGCTACCTGTAAGTTGCGTGGCCTCCGCTGCGATCGCCCCTCA
AACGTCCTCGACGACAGTGGGAGTCGCTGCCAGCGCCCCTGCAGCGTCCC
CAACGACCTCGAAGCTGCACAAAGGCACGTCCTCTATGACCCAACTCGGC
GAAACCGGTCGAGAGAACACGGGTCGATGGACTTGCGAGGAACATGTTTT
GTTTTTAAAAGGCTTGGAGATGCACGGGAAAGGCTGGAAAAAAATTGCCA
AATTGATTAAAACCCGGACCGTTGTCCAGATCCGGACCCACGCGCAGAAA
TATTTCCAAAAATTggcaaaagcaaagaaaaatgGGCACCATGGGGACAT
GCTTGGAATGGAAGGCACACGATTCGGGGGAAAGCGTGTGAAGTTCACTG
GGAAACGGCGAGGGTTGGTCTACGGGAGCTACTTGGTCGGTGCGGAGGCG
ACTTCCGCAGCCATCTCTCCTGCCTTGCAGTCCTACATGCCCGGGTCTTG
GGCCGGgcgtgaggaaggggaagcgcTGTCggataaggaggaggacgccg
ccatCGAGAAAGGGCTTTATCGATTTCTGTCTCCCGTCGTATTGGACGCT
GCGGCGAGTAACCTGGACGCGACCGCGCCGGAAGTTTTGCCTCCGAGCAC
ACCGGGAACAGGAGTGCACGCCAACGGGGTAGTGGGGGCAGACGGCGaga
cgacggaggaggatgggagcagCGGCGGGGACAACGTGGACGTCAGTGAG
ACGACCGATGACGCTGACTCCTCATCGGGCGAGCCCCTGCCGCGCTTGGC
CCGCGTCACGAATGACATGTATGAGCGATGTAGTGTGCCCACCTGGTTTA
TGAAGGGCGGGGATATCGAAGAGCTCTTGGCCGATGCTGCCGCGATCGAC
TGGCGCGAGGACTCCGGGGGAGACGCGGTGAAGGCTGAAGAGCGCGGGGC
GAGCATTTTGAACGCCAATATTGAGAATTCCGACCAAGCTCAGAGCCACA
GGAATGGCGAGAAAGTGGCCGTTCCGAATAGGGTCGCAGCCGTGAAAGTG
GCAGGAAACATTTCCGCGGACAGTTCTTACATAACATCGGGTGCCAGCCA
ATGCGTCAAACACCCTCCTACGACCAACACTATCGATGGCAAGCGCAGCA
ACATGAATTCGGGGCAGTCGCTGCCAACCGCGAATGGACGGAACGGTGCA
GCCTCAGGACGATGCGTCACAGGGCGTGGACAGcagcaaaagaaaaagca
gccaAAAACACAAGAATCGGGGAACCACGGCAAGCAGCACTTAGCGAACA
AGCATAGCGCCCCTACGGGAGACATGTTCCAGTCAAAGGCAGGCGCTGGC
ACGATCGTCCTTCAAGGTGATATCAACTGCTTTGCATCTTTGGACCCGCA
CCATGTTgagctgaaggaggagcattCCCACCACGAGCTACGTTTGGAAG
AGTTGCAGCAAAGCGGCGTCAACGATGACACGTTCGCACACATGGATTTC
TTGGCGAACGACGAGGCGCCCGTGGACCATCACGCAGGCCACCTCCACAC
CATTTCTACGCACGATGACGTGCATAGTCATGCCGACCATGACGTTCATA
TGCGCAACTATGACGTCTTTTGGAAAGATACGGTACCTGACGGCGACCAT
GGCTTGCTGCTCGATGATTTTGACGGCGGAATCGAATTTTGA back to top
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