EWM30452.1, cds224 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|585113115|gb|EWM30452.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1252.65 bits (3240), Expect = 0.000e+0 Identity = 606/606 (100.00%), Postives = 606/606 (100.00%), Query Frame = 0
Query: 1 MGIGSEAVAEVGSGTSSAPCGSNSASPMMPVVTASQNAAESVAGSMLPVSCVASAAIAPQTSSTTVGVAASAPAASPTTSKLHKGTSSMTQLGETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSGGDAVKAEERGASILNANIENSDQAQSHRNGEKVAVPNRVAAVKVAGNISADSSYITSGASQCVKHPPTTNTIDGKRSNMNSGQSLPTANGRNGAASGRCVTGRGQQQKKKQPKTQESGNHGKQHLANKHSAPTGDMFQSKAGAGTIVLQGDINCFASLDPHHVELKEEHSHHELRLEELQQSGVNDDTFAHMDFLANDEAPVDHHAGHLHTISTHDDVHSHADHDVHMRNYDVFWKDTVPDGDHGLLLDDFDGGIEF 606
MGIGSEAVAEVGSGTSSAPCGSNSASPMMPVVTASQNAAESVAGSMLPVSCVASAAIAPQTSSTTVGVAASAPAASPTTSKLHKGTSSMTQLGETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSGGDAVKAEERGASILNANIENSDQAQSHRNGEKVAVPNRVAAVKVAGNISADSSYITSGASQCVKHPPTTNTIDGKRSNMNSGQSLPTANGRNGAASGRCVTGRGQQQKKKQPKTQESGNHGKQHLANKHSAPTGDMFQSKAGAGTIVLQGDINCFASLDPHHVELKEEHSHHELRLEELQQSGVNDDTFAHMDFLANDEAPVDHHAGHLHTISTHDDVHSHADHDVHMRNYDVFWKDTVPDGDHGLLLDDFDGGIEF
Sbjct: 1 MGIGSEAVAEVGSGTSSAPCGSNSASPMMPVVTASQNAAESVAGSMLPVSCVASAAIAPQTSSTTVGVAASAPAASPTTSKLHKGTSSMTQLGETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSGGDAVKAEERGASILNANIENSDQAQSHRNGEKVAVPNRVAAVKVAGNISADSSYITSGASQCVKHPPTTNTIDGKRSNMNSGQSLPTANGRNGAASGRCVTGRGQQQKKKQPKTQESGNHGKQHLANKHSAPTGDMFQSKAGAGTIVLQGDINCFASLDPHHVELKEEHSHHELRLEELQQSGVNDDTFAHMDFLANDEAPVDHHAGHLHTISTHDDVHSHADHDVHMRNYDVFWKDTVPDGDHGLLLDDFDGGIEF 606
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|298714408|emb|CBJ27465.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.895 bits (359), Expect = 1.264e-33 Identity = 101/254 (39.76%), Postives = 133/254 (52.36%), Query Frame = 0
Query: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVKFTGKRRGLVYGSYLVGAEATSAAISPALQSYMPGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSG-EPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSGG 350
+NTGRWT +EH LFL+GLE+HGKGWKKIA LIKTRTVVQIRTHAQKYFQK+AKAK+NG HGD+ ++ + + L+ G S A++P+LQ Y+ G+ A+E GLYRFLSP+ + +L+ PP+ G G A GV G G+S S+ A SS+G P A P W+ G +++LL +A +DW DSGG
Sbjct: 4 KNTGRWTYDEHRLFLRGLELHGKGWKKIASLIKTRTVVQIRTHAQKYFQKIAKAKQNGEHGDVAMDSKGHGSRRKSRGRRRMEDLLRG---------STAVAPSLQPYVAGA----------------GAVETGLYRFLSPITIQ----DLER------PPAAAGQGGTAGGVGGGAAGLGGNGGASLQ-----SQLAGHATSSAGASPTTTTAGAAMAAAAAVLPPNWYRAGRGVDDLLTEAEGLDWLADSGG 217
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|1210516787|dbj|GAX24276.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 144.05 bits (362), Expect = 1.887e-33 Identity = 102/287 (35.54%), Postives = 133/287 (46.34%), Query Frame = 0
Query: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVK--------FTGKRRGLVYGSYLVGAEATSAA------------------------ISPALQSYM---PGSWAGREEGEALSDKEEDAAIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSG 349
ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA++NG GD + MEG R G + T KRR + G+ ++ A+ I+PAL ++ P S AG + D A+E L+RFL+PV + N A P + P T A V T G ++ + + DA P+W+ KG D++ LL + +DW D+G
Sbjct: 96 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGD-ITMEG-RGGNASITSNTTATAAMTNKRRRHITGTKRKVIQSVVASAQRQAKKANLTEIGNPSKNVAVPGIAPALAYFVTPTPSSSAGPDTDLMTDDHISGPALEDSLFRFLTPVPIATDHVNDVARQAGANPITLPSTNGQALASVPGRSPT-------GVQDLSIYPSWTDAKDP---------------------PSWYAKGADVDALLDVSDTLDWLADTG 352
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|219128113|ref|XP_002184266.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404497|gb|EEC44444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 144.05 bits (362), Expect = 2.481e-33 Identity = 106/293 (36.18%), Postives = 141/293 (48.12%), Query Frame = 0
Query: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEG-------------TRFGGKRVKFTGKRRGLV---------YGSYLVGAEA----------TSAAISPALQSY-MPGSWAGREEGEALSDKEEDA--------AIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSG 349
ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA++NG GD + MEG +R + TG +R + G L A+ ++PAL Y +P + + G A+ KEE A+E L+RFL+P+ + N A P S P + VGA GE + +G ++ + + D S EP P+W+ KG DI+ LL ++DW +D+G
Sbjct: 115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGD-VAMEGRGGVASITSVSTTAVLPKRRRQTTGTKRKAIQSVVASAQRQGKKLAAAKTNPTRHHPLPPPLPTVAPALAHYTLPSTAMMAKNGTAV--KEEYVSPTNLSGPALEDSLFRFLTPLPVSEPPLNEVARQAGANPISLPTDNPSSIPTVGA-GEISP----TGVSDLMLYPSWTD----SKEP-----------------PSWYSKGADIDALLDMGDSLDWLDDTG 378
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|1210512502|dbj|GAX28359.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 142.124 bits (357), Expect = 7.156e-33 Identity = 100/286 (34.97%), Postives = 132/286 (46.15%), Query Frame = 0
Query: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEGTRFGGKRVK--------FTGKRRGLVYGSYL------------------------VGAEATSAAISPALQSYM-PGSWAGREEGEALSDKE-EDAAIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSG 349
ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA++NG GD + MEG R G + T KRR + G+ G I+PAL ++ P + + + L+D +E L+RFL+PV + + N A P + P T HA V T G ++ + + DA P+W+ KG D++ LL + +DW D+G
Sbjct: 97 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGD-ITMEG-RGGNASITSNTTATAAMTNKRRRHITGTKRKVIQSIVASAQRQAKKAHLTELGDAGKSPVVPGIAPALAYFVTPTPSSASPDIDLLTDDHISGPVLEDSLFRFLTPVPIASDHVNDVARQAGANPITLPSTNSHALTSVPGSSPT-------GVQDLSIYPSWTDAKDP---------------------PSWYAKGADVDALLDVSDTLDWLADTG 352
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|219128116|ref|XP_002184267.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404498|gb|EEC44445.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 140.969 bits (354), Expect = 3.685e-31 Identity = 107/293 (36.52%), Postives = 141/293 (48.12%), Query Frame = 0
Query: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNGHHGDMLGMEG-------------TRFGGKRVKFTGKRRGLV---------YGSYLVGAEA----------TSAAISPALQSY-MPGSWAGREEGEALSDKEEDA--------AIEKGLYRFLSPVVLDAAASNLDATAPEVLPPSTPGTGVHANGVVGADGETTEEDGSSGGDNVDVSETTDDADSSSGEPLPRLARVTNDMYERCSVPTWFMKGGDIEELLADAAAIDWREDSG 349
ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA++NG GD+ MEG +R + TG +R + G L A+ ++PAL Y +P + + G A+ KEE A+E L+RFL+PV + N A P S P + VGA GE + +G ++ + + D S EP P+W+ KG DI+ LL ++DW +D+G
Sbjct: 115 ENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDV-AMEGRGGVASITSVSTTAVLPKRRRQTTGTKRKAIQSVVASAQRQGKKLAAAKTNPTRHHPLPPPLPTVAPALAHYTLPSTAMMAKNGTAV--KEEFVSPTNLSGPALEDSLFRFLTPVPVSEPPLNEVARQAGANPISLPTDNPSSIPTVGA-GEISP----TGVSDLMLYPSWTD----SKEP-----------------PSWYSKGADIDALLDMGDSLDWLDDTG 378
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|397610547|gb|EJK60893.1| (hypothetical protein THAOC_18691 [Thalassiosira oceanica]) HSP 1 Score: 114.775 bits (286), Expect = 6.801e-24 Identity = 49/58 (84.48%), Postives = 54/58 (93.10%), Query Frame = 0
Query: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG 155
ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA+++G
Sbjct: 308 ENTGRWTAEEHRLFLQGLERHGKGWKKIATLIKSRTVVQIRTHAQKYFQKLAKARQSG 365
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|1072235817|gb|OEU20545.1| (hypothetical protein FRACYDRAFT_165241, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 102.449 bits (254), Expect = 4.249e-23 Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 0
Query: 102 RWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG 155
RWT EEH LFL+GLE+HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKAK+NG
Sbjct: 1 RWTSEEHNLFLQGLELHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAKQNG 54
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|224007633|ref|XP_002292776.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971638|gb|EED89972.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 112.079 bits (279), Expect = 5.344e-22 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 0
Query: 98 ENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAK 152
ENTGRWT EEH LFL+GLE HGKGWKKIA LIK+RTVVQIRTHAQKYFQKLAKA+
Sbjct: 416 ENTGRWTAEEHRLFLQGLEQHGKGWKKIAGLIKSRTVVQIRTHAQKYFQKLAKAR 470
BLAST of EWM30452.1 vs. NCBI_GenBank
Match: gi|299470563|emb|CBN78551.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 110.538 bits (275), Expect = 1.042e-21 Identity = 47/62 (75.81%), Postives = 56/62 (90.32%), Query Frame = 0
Query: 94 ETGRENTGRWTCEEHVLFLKGLEMHGKGWKKIAKLIKTRTVVQIRTHAQKYFQKLAKAKKNG 155
+ G ENTGRWT +EH LFL+GLE+HGKGWK+IA LI+TRTVVQIRTHAQKYFQKL+KA+ +G
Sbjct: 25 QPGNENTGRWTSDEHRLFLRGLELHGKGWKQIATLIQTRTVVQIRTHAQKYFQKLSKAQASG 86 The following BLAST results are available for this feature:
BLAST of EWM30452.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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