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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100636g3.7282.mrna |
| Orig protein id | gnl|cribi|Naga_100636g3.7282 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1212582..1215939 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2228 ID=rna2228|Name=rna2228|organism=Nannochloropsis gaditana|type=mRNA|length=1348bp
AGGCAAATGTATCGATGCTAGCTATAAGAGCTTCTCACGAGCCAACGACA
TCATACTACTACCTTTTTCACACTTTGTAGCAGCATGCGTCGTGGCAGAT
GCCGCATTCACGCCCTCGTGTCACATTGCTTTAGTGTGCTGCTCATCACC
TTCGTGCTTCAAGCCCTTCTGGAACAAAATGGGGGGAATGATCAGAATCC
CTTTAACGTCCACGCTTTCCAAATTCCGACGCGTACACAATTGAATTCCA
AGCCTGAACGACAACCAAGCTCCCGGGCCCACCATACTGCTTTGAGTTCG
TCGCCTTTTGACGATTTTTTTCTCTTGGATGACCCCTTTCACCAGCGTCG
TCCCTCCCCTCCTCCTCCCTCCTCTACGGCGGGCAGTCTCCCTCCGGGAA
CTCACGTCCATATCGCGGACCTCCAAGGCCCCGGGCTGGTGATGGGGCGG
GACGCGGATGGACAGTACGTGCTGCAGTGCCACGTGGCGGGCCAGTCCAT
GCCGGTCCTGGTGCGTCGTCCTGCCAGCCAACTGTATGTCCGGGGTCCTG
ACGACACGCGACCGGATAGGGCACCTACTACTCCTTCTTCTTCCTCTTTC
CCGTCCTCACCCATCACCTCTGCCACCCGTCCCGAATCTGCGTCTCTGGA
CCAAGCGCAGCGTAGGGAGGAGGCGGGAGGGGAGGGGAGGGGCAGCTACC
GTGTGCTCCACGACCCGAAGACTGGCAAGACCTACGCGATCTACCACACA
TCACCCCGCCCTCGTTTTCAGGGTTCTACAGGTTCCAGGCCTCTGGCGCA
AAAGCGCGTGCGTTTGTCGCCTGGCCGGGAGGAACTTCGTGACTTCTTCC
TCTCTCGGCAGGGTCCCGGGGGTCCGATGGCAAATACTGCGACCATGTCC
TCGACCCCTTCCTCCCCCCTGTCCTACCCCCGCCCCCCCCTTCCCTCGTC
CGAGGGAGTCTACTCGCCCTCCGTTTCCTGGGAGGGACTTCGCCGCACAG
GCTTACCAAGACCAACTGCATGCTTTATCCGCTGCGTCCTCCCCCGCGTC
CACGCCCGCCTCCTCCCCTTCCTCCCCTTCCTCCACCTCCTCTTCCCCTT
CGGACGCGCAATACCGAGCGCTGTGTCGCTTAGCGGAGGTCTATTCTCTG
CATGGGGAACCTGAAGCAACCCTTTTGTATCTCCGCAGTGCGGAGACGCT
AGACTCGAACCGTTTCTCAAAGGACGTGGAGGCGTTAAGCAGGCTGGGGG
AGGCACAACACCGCCTGGGACAATTAAAAGGCGCACGGAGGACGTACCAA
CGCGTGGTTCACCTGCAAGAAAGCGAACGGAAGGAGGGAGGGAGGGAG back to topprotein sequence of rna2228 >rna2228-protein ID=rna2228-protein|Name=rna2228|organism=Nannochloropsis gaditana|type=polypeptide|length=569bp
MADSTEEQSSSPSKAPYPPPRPPRAGGIKGTSPFYSISDNSTGAETSGTA
KTTTDSNAMEHNARGMTAKHHSAKRPSSVSSHSGKSSRGPSPYPGRTSES
RAGLLYHQNVAQNVSESMEEVTGLRRRHPAASERAPSPERDGVHAQGADR
RRSSTPGGGPSVLGALGRGVLGVSKWTLGSLSNQLGPPFAWAEFMFAWVR
EVTPPRLKRLAIIFWDAGAHITKLAYTSGGEELGFAARNVIDGLVETIAA
PKGRAFVLEGGMTFVKFAEAVDTPEMHAAITQGFKLGSRGLEVLATEQAK
DFLSNVSDFLSRLVRLANAPETTLAVAEFVTVVCHALAQENAAYSRERVS
QLSPFEGAGEGGEEEGEEGEKGGEGPVKEGGKKKKKGMRIVKNEDGERLE
WDEDLVLGRKGGREEEGEEGKEAGDESGTTASSDTPSSWAKAGGEGEREG
EREAGGGVEGDLLPIQDGEMEDMLGARWGGRGEGRLGRVGADKASTVKGL
VEAILDEKRAAAEARTGGGVGVQYKTEQERAARCALSFLFFITYTFFALI
GIRASIGSLTAAVGGYKRG back to topmRNA from alignment at CM002458.1:1212582..1215939- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2228 ID=rna2228|Name=rna2228|organism=Nannochloropsis gaditana|type=mRNA|length=3358bp|location=Sequence derived from alignment at CM002458.1:1212582..1215939- (Nannochloropsis gaditana)
TCAAGTTCGGGGCGCCTCAACATACACATGAACCCGGTGGCTCGCGTATA
TCAGTCCGTGAGGGTTCAGGAATGCAAAAGAAAGCAAAGCAACCCCTAAA
TCCGAGGCCGGGCTCACCCTCGCGCATCAGGGAAACACGCACAACAGGTC
CATATTCCAACTACGTCTGTATGCCCTGCCTGGTGCACGTCCACCTGGTC
TCTACGTCTTTTTATTTCCACATCTTGTGGACCACCCCGACGGCTCATAT
TTCTCAGGCAGGCCATAGCCCCAGCAAGCTCGGAACGCCTTTTAAAAAAT
GATGCTCCACGCTTCCGGGGACCAATTACCGTGGTTGCGGCCCCCCAACC
CGCCAATTGACTTGCGCACAAAATTATTGTTGCTGTGATTTGGTGGTTTG
CGAACCTGGGCGACGCGTTTTTGTGGACGAGATGTGGTCTTGGAAGGCTG
TGGTTCAAGAAGGTTGGGGTTGAAGCACTCCTCTCAACATACGCCCATCG
TTCTTTTCCTTCTTTTTTTGCTGCCACGCGCCCCAGCCTTCGTCTACACT
AGATTGCGATGGCAGACTCGACAGAGGAGCAATCGTCTTCACCTTCCAAG
GCGCCGTATCCGCCGCCGCGGCCCCCGCGTGCTGGCGGCATCAAAGGCAC
AAGTCCCTTCTATTCCATCAGTGACAACAGCACAGGGGCCGAGACCAGCG
GAACGGCCAAGACAACCACGGACAGCAACGCCATGGAACATAATGCCCGC
GGGATGACCGCGAAGCATCACAGTGCCAAAAGACCTTCGTCTGTCTCCAG
CCACAGTGGCAAATCCTCACGGGGACCATCTCCCTATCCTGGCCGCACGT
CCGAGAGCCGCGCTGGCCTCCTCTACCACCAAAACGTCGCACAAAACGTC
AGCGAAAGCATGGAGGAAGTCACAGGCCTTCGGCGTCGGCATCCGGCGGC
CTCGGAACGCGCGCCGTCCCCAGAACGTGACGGTGTGCACGCGCAGGGGG
CGGACCGACGGCGTAGCTCCACTCCAGGAGGGGGGCCTTCCGTGCTGGGA
GCATTGGGTCGCGGAGTCCTAGGGGTGAGCAAATGGACTCTAGGCTCCTT
GTCCAACCAATTGGGCCCTCCATTTGCTTGGGCGGAGTTTATGTTTGCCT
GGGTGCGGGAGGTGACCCCTCCCCGATTGAAGCGCCTCGCCATTATCTTT
TGGGATGCTGGTGCCCACATCACGAAGCTGGCGTACACTTCTGGCGGAGA
AGAATTGGGTTTTGCCGCTCGAAACGTGATCGACGGGTTGGTGGAGACGA
TCGCGGCACCTAAAGGCCGAGCATTTGTATTGGAAGGAGGGATGACCTTT
GTGAAATTCGCCGAGGCGGTGGACACGCCGGAAATGCACGCCGCCATCAC
GCAAGGCTTCAAGCTGGGCTCCCGGGGCCTTGAAGTATTGGCCACAGGTA
GGAAGAGAAGTCGACGGAGGGGAGGAGGGATCGAGGGAGGGGTCGGTCCA
TCGCGGCGGCCTTGCCTACCGTGGCCGGAGAGGGCACCGGCTGGAGGGAG
ACGAACTCGGTGGAGCGGACGTGGAGGAGGCGGGCGTATTGGCCCATGCT
CCGAAGGAAGATGGAAAGGCAGGTGGACAAGGGACGTCGCACGCTCCTAC
CGAGGTGATAGCCTCGGATCCCTAATTTCTCTCCCTCCCTCCCTCCCTCC
TTCCCTCCCTCCCTGCCTCCCTCCTTCCTTCCTCTTCATGCACCCCAGAG
CAAGCCAAGGACTTCCTCTCCAACGTGTCGGATTTCCTCTCGCGCCTGGT
GCGCCTGGCGAATGCCCCCGAAACCACCCTGGCCGTGGCAGAATTCGTGA
CTGTGGTGTGTCATGCCTTGGCTCAAGAAAACGCCGCTTACAGCCGGGAA
CGGGTCTCCCAGCTCTCGCCGTTCGAAGGGGCGGGAGAGGGAGGGGAGGA
GGAGGGAGAGGAGGGAGAAAAGGGAGGGGAGGGCCCGGTGAAGGAGGGGG
GAAAGAAGAAAAAGAAGGGCATGCGCATTGTGAAAAACGAAGACGGAGAG
AGGCTGGAATGGGATGAGGACTTGGTATTGGGTCGGAAGGGTGGGAGGGA
GGAAGAGGGGGAGGAAGGGAAGGAAGCAGGGGACGAGAGCGGTACTACTG
CGTCGAGTGACACCCCATCCTCGTGGGCGAAGGCGGGAGGCGAGGGCGAG
CGGGAGGGCGAGCGGGAGGCGGGGGGAGGGGTGGAAGGCGACCTGCTCCC
GATCCAGGACGGGGAGATGGAGGACATGCTGGGGGCGCGGTGGGGCGGAC
GAGGGGAAGGGAGGCTGGGCCGAGTAGGTGCAGACAAGGCCTCGACGGTG
AAGGGCTTGGTGGAGGCGATCTTGGATGAGAAGCGCGCGGCCGCGGAAGC
CAGGACAGGAGGCGGGGTCGGGGTCCAGTACAAGACCGAGCAGGAGCGTG
CCGCCCGTTGTGCCTTGTCCTTCTTGTTTTTCATCACCTACACATTTTTT
GCCCTCATTGGGATCCGGGCCTCCATCGGAAGCTTGACTGCCGCTGTGGG
GGGATACAAGAGGGGATGAGGGAGGCATACGGGCGGAGTAAGGAAAACGA
GATGGAGCTGGCGCGAGCGAAAAGGGAGGCAGTGGTTGGGAGGGGATTTT
TGGTCAAACTACGTGCTTGTAACATGGTAGCCTGGCGTCATCCCTCTGGT
TTAGTATCCAGGGGGGTTGGGGATTTCTGGCGAGGGTTGCCTCGGATAGC
GCTAGGCAAGGACAGAGAGGAGGACACCGGGCGAAGGCGTTAGAGAGGGG
TCGGGATGGGAGTTTGGACCCTGTGTAGAGGGAGGCCGCCGGGCACGGAT
ACGATACGATAGGTCGTGGATTGGGGAGGTAGTCTGGAGGCGGGGGAGGA
CGGCTGCGATTGGATGGGGAAATTTTGACGAGACAGGCTTGTGAAATATT
AGGTAAGAAGGAAAGGGTCTCTTGGTCGTCCGGAGCGGCGGGGACAGCGT
AAAAATTCTGAGAAAGGAGATTGACGGTCGATGACGATCCAAGAATGGCG
AAGTTGTGTCCGTTTCTTTGTCCCTCAGGAGCCACGCGCGTTTTTTTAAA
ATGTGCAAGGTCATCGATTTCCATATCAAAAGAAAATGGCTGACGTACTG
CCTGAAATGTCACATTCGGAGGACAATGGGGAAAGGGCTTTGTGCTGTCC
ACAAATCAACTTGAGATATGTGTCATTGATACGGTGAGACATACAATTCA
ATTCTGCGACCGATTTTGCTTCAAATGGTATTATCACTTACGACTACTGG
TCGGACTCTTTTCGCATGATATCTCACGTGTATGATGACGGGAAACAAAA
TAATAGGT back to topCoding sequence (CDS) from alignment at CM002458.1:1212582..1215939- >rna2228 ID=rna2228|Name=rna2228|organism=Nannochloropsis gaditana|type=CDS|length=3420bp|location=Sequence derived from alignment at CM002458.1:1212582..1215939- (Nannochloropsis gaditana)
AGCAAGCCAAGGACTTCCTCTCCAACGTGTCGGATTTCCTCTCGCGCCTG
GTGCGCCTGGCGAATGCCCCCGAAACCACCCTGGCCGTGGCAGAATTCGT
GACTGTGGTGTGTCATGCCTTGGCTCAAGAAAACGCCGCTTACAGCCGGG
AACGGGTCTCCCAGCTCTCGCCGTTCGAAGGGGCGGGAGAGGGAGGGGAG
GAGGAGGGAGAGGAGGGAGAAAAGGGAGGGGAGGGCCCGGTGAAGGAGGG
GGGAAAGAAGAAAAAGAAGGGCATGCGCATTGTGAAAAACGAAGACGGAG
AGAGGCTGGAATGGGATGAGGACTTGGTATTGGGTCGGAAGGGTGGGAGG
GAGGAAGAGGGGGAGGAAGGGAAGGAAGCAGGGGACGAGAGCGGTACTAC
TGCGTCGAGTGACACCCCATCCTCGTGGGCGAAGGCGGGAGGCGAGGGCG
AGCGGGAGGGCGAGCGGGAGGCGGGGGGAGGGGTGGAAGGCGACCTGCTC
CCGATCCAGGACGGGGAGATGGAGGACATGCTGGGGGCGCGGTGGGGCGG
ACGAGGGGAAGGGAGGCTGGGCCGAGTAGGTGCAGACAAGGCCTCGACGG
TGAAGGGCTTGGTGGAGGCGATCTTGGATGAGAAGCGCGCGGCCGCGGAA
GCCAGGACAGGAGGCGGGGTCGGGGTCCAGTACAAGACCGAGCAGGAGCG
TGCCGCCCGTTGTGCCTTGTCCTTCTTGTTTTTCATCACCTACACATTTT
TTGCCCTCATTGGGATCCGGGCCTCCATCGGAAGCTTGACTGCCGCTGTG
GGGGGATACAAGAGGGGATGAATGGCAGACTCGACAGAGGAGCAATCGTC
TTCACCTTCCAAGGCGCCGTATCCGCCGCCGCGGCCCCCGCGTGCTGGCG
GCATCAAAGGCACAAGTCCCTTCTATTCCATCAGTGACAACAGCACAGGG
GCCGAGACCAGCGGAACGGCCAAGACAACCACGGACAGCAACGCCATGGA
ACATAATGCCCGCGGGATGACCGCGAAGCATCACAGTGCCAAAAGACCTT
CGTCTGTCTCCAGCCACAGTGGCAAATCCTCACGGGGACCATCTCCCTAT
CCTGGCCGCACGTCCGAGAGCCGCGCTGGCCTCCTCTACCACCAAAACGT
CGCACAAAACGTCAGCGAAAGCATGGAGGAAGTCACAGGCCTTCGGCGTC
GGCATCCGGCGGCCTCGGAACGCGCGCCGTCCCCAGAACGTGACGGTGTG
CACGCGCAGGGGGCGGACCGACGGCGTAGCTCCACTCCAGGAGGGGGGCC
TTCCGTGCTGGGAGCATTGGGTCGCGGAGTCCTAGGGGTGAGCAAATGGA
CTCTAGGCTCCTTGTCCAACCAATTGGGCCCTCCATTTGCTTGGGCGGAG
TTTATGTTTGCCTGGGTGCGGGAGGTGACCCCTCCCCGATTGAAGCGCCT
CGCCATTATCTTTTGGGATGCTGGTGCCCACATCACGAAGCTGGCGTACA
CTTCTGGCGGAGAAGAATTGGGTTTTGCCGCTCGAAACGTGATCGACGGG
TTGGTGGAGACGATCGCGGCACCTAAAGGCCGAGCATTTGTATTGGAAGG
AGGGATGACCTTTGTGAAATTCGCCGAGGCGGTGGACACGCCGGAAATGC
ACGCCGCCATCACGCAAGGCTTCAAGCTGGGCTCCCGGGGCCTTGAAGTA
TTGGCCACAGAGCAAGCCAAGGACTTCCTCTCCAACGTGTCGGATTTCCT
CTCGCGCCTGGTGCGCCTGGCGAATGCCCCCGAAACCACCCTGGCCGTGG
CAGAATTCGTGACTGTGGTGTGTCATGCCTTGGCTCAAGAAAACGCCGCT
TACAGCCGGGAACGGGTCTCCCAGCTCTCGCCGTTCGAAGGGGCGGGAGA
GGGAGGGGAGGAGGAGGGAGAGGAGGGAGAAAAGGGAGGGGAGGGCCCGG
TGAAGGAGGGGGGAAAGAAGAAAAAGAAGGGCATGCGCATTGTGAAAAAC
GAAGACGGAGAGAGGCTGGAATGGGATGAGGACTTGGTATTGGGTCGGAA
GGGTGGGAGGGAGGAAGAGGGGGAGGAAGGGAAGGAAGCAGGGGACGAGA
GCGGTACTACTGCGTCGAGTGACACCCCATCCTCGTGGGCGAAGGCGGGA
GGCGAGGGCGAGCGGGAGGGCGAGCGGGAGGCGGGGGGAGGGGTGGAAGG
CGACCTGCTCCCGATCCAGGACGGGGAGATGGAGGACATGCTGGGGGCGC
GGTGGGGCGGACGAGGGGAAGGGAGGCTGGGCCGAGTAGGTGCAGACAAG
GCCTCGACGGTGAAGGGCTTGGTGGAGGCGATCTTGGATGAGAAGCGCGC
GGCCGCGGAAGCCAGGACAGGAGGCGGGGTCGGGGTCCAGTACAAGACCG
AGCAGGAGCGTGCCGCCCGTTGTGCCTTGTCCTTCTTGTTTTTCATCACC
TACACATTTTTTGCCCTCATTGGGATCCGGGCCTCCATCGGAAGCTTGAC
TGCCGCTGTGGGGGGATACAAGAGGGGATGAATGGCAGACTCGACAGAGG
AGCAATCGTCTTCACCTTCCAAGGCGCCGTATCCGCCGCCGCGGCCCCCG
CGTGCTGGCGGCATCAAAGGCACAAGTCCCTTCTATTCCATCAGTGACAA
CAGCACAGGGGCCGAGACCAGCGGAACGGCCAAGACAACCACGGACAGCA
ACGCCATGGAACATAATGCCCGCGGGATGACCGCGAAGCATCACAGTGCC
AAAAGACCTTCGTCTGTCTCCAGCCACAGTGGCAAATCCTCACGGGGACC
ATCTCCCTATCCTGGCCGCACGTCCGAGAGCCGCGCTGGCCTCCTCTACC
ACCAAAACGTCGCACAAAACGTCAGCGAAAGCATGGAGGAAGTCACAGGC
CTTCGGCGTCGGCATCCGGCGGCCTCGGAACGCGCGCCGTCCCCAGAACG
TGACGGTGTGCACGCGCAGGGGGCGGACCGACGGCGTAGCTCCACTCCAG
GAGGGGGGCCTTCCGTGCTGGGAGCATTGGGTCGCGGAGTCCTAGGGGTG
AGCAAATGGACTCTAGGCTCCTTGTCCAACCAATTGGGCCCTCCATTTGC
TTGGGCGGAGTTTATGTTTGCCTGGGTGCGGGAGGTGACCCCTCCCCGAT
TGAAGCGCCTCGCCATTATCTTTTGGGATGCTGGTGCCCACATCACGAAG
CTGGCGTACACTTCTGGCGGAGAAGAATTGGGTTTTGCCGCTCGAAACGT
GATCGACGGGTTGGTGGAGACGATCGCGGCACCTAAAGGCCGAGCATTTG
TATTGGAAGGAGGGATGACCTTTGTGAAATTCGCCGAGGCGGTGGACACG
CCGGAAATGCACGCCGCCATCACGCAAGGCTTCAAGCTGGGCTCCCGGGG
CCTTGAAGTATTGGCCACAG back to top
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