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Properties
| Property Name | Value |
|---|
| Product | gcn5-related n-acetyltransferase |
| Orig transcript id | gnl|cribi|Naga_100617g3.7552.mrna |
| Orig protein id | gnl|cribi|Naga_100617g3.7552 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1195301..1196878 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2221 ID=rna2221|Name=rna2221|organism=Nannochloropsis gaditana|type=mRNA|length=1237bp
ACATAGCTGCCACAGGTTCGTTCCATGGAGCCAGCAGGAGAATTGGATTT
GCCGCCTGGGTTTACTGCAGCTGGTGCCGGGATGTCGGGGGCAGGCGGTA
GGGGTATGTCGACCGAAGAAATGGAGGCACAAAAAGCAAAGCATGCTGAA
ATGGAAGAACGCCGACAGTTTATGTTGGACCAAATTTTATCACCAGAAGC
CAAGGAACGGCTTGCTCGCATTGCCATTGTCCGCAAGGAAAAAGTGCGTG
GGGTTCAAGACATGCTCATTCAGGCAGCCACGTCGGGTCGCTTGCGGGGG
AAGGTATCAGAAGAACAACTCATCGAGATGCTGGAACAGGTCTCTTCCCA
AGTGGACAAAAAGGCCACCAAGGTGACCATTCAACGGCGTCGGTGTCTGG
ACGAGGACGAGGATGACAACGATGACGACATGCTCTGAGGGCAGGGGGAG
TCGTCTCGGTGCCCGTGGACTAGGTCCCGGGCAAGAGGAACAGCGCTCCC
TAGAAGGCAATGTACAGCAGGGTTTTCAGTAGATTAAGTGAAATTAAGCT
CGTAAGGCAACAACCTGATTAGAATTCATTCGTTTTTTGGTTTTCATGGA
GACTTTGGCGCGACTCAATGCATGCCATCACCCTAGTCTGGTACGTGGCT
CAGACATGGCCGCCCCTTGCCCCTTAGTCCCAAAATCTCCAGGACTAGTT
TGACCTTTCTCTTGATATTCCGCTCTCTGTTTCAATGCCTGACCTGGTAA
AACGAAGCAAATGATTCTTAAACGGGCGTACACATAGGTTCTATGCATAT
TCGTTAATCTAAGAACGAGGGGGAGTGCCTCAAGGTAGAAAGAAGAGGGC
GCGTGGGAGAAAAGAAGAACTGGTGCCCCGGGCGCGGTCAACACATCCCC
ATGCACGTATTCATGCTGCAAGGATTTTATAAAAATCTCAAGCCTGCCAT
CTCTATTCGGAGCCACTGATTTTTTCCCCCTCCCAATTTATACTGGAGGA
TGTACCCGCAAACCCACGTGTTTCCCCTTGAATTAGTCGAGTTATAGGAT
ACATTAGGATAGATCCCGACATGCAAAGTACTTAGTCGAACTTTTCAAGT
CATATTTTCATTATTACGTAAAGTAGCAAAGAGACAGAGTAAGGAAAAAA
CGACGAACATTTCAGGAAAAAGTAGAAAAAGAAAAAAAATCTCGGCCGAT
TGTCGGTCTTGTACGTGGAAAAGGCAACCGGGAGGTC back to topprotein sequence of rna2221 >rna2221-protein ID=rna2221-protein|Name=rna2221|organism=Nannochloropsis gaditana|type=polypeptide|length=340bp
MGAMRRHVGWRWPPLTHPLRAVLLLLFLHCRRDVALAFRFPGNPFLPSAP
RSVPQGHSPRPRSLVPSCTATTSSNNNPHSLPDDVASPSVKPSSAPCLPQ
SRLSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTSYWIDP
FHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVD
KTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCN
ARGFGLYASLGYEVLWEWPGERVWMMRKWVVDEEDRKEAVKKEREGWEGM
VGAVMMPFMTWAGEEGGGKEGGEEGKEVGTENLDARKEGM back to topmRNA from alignment at CM002458.1:1195301..1196878+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2221 ID=rna2221|Name=rna2221|organism=Nannochloropsis gaditana|type=mRNA|length=1578bp|location=Sequence derived from alignment at CM002458.1:1195301..1196878+ (Nannochloropsis gaditana)
ATGTAACGCCAGTTGGACGGGACAAAACGCGGGGCTGTAAAGTAAATTGT
CGTCCTAGTGCCTGAGTCTTGCACGTCTAGTcagcgcctcccgccctcct
gatCGGATCGTAGTACTTTTCCCCGACAACTTTACCTGGTGACAACTATC
GGGGGATGAACTACAGGACAAGGCCCTCTTAAGTTCGTATCAGATATGAA
ATAGGCTCCTTTGACGTGCTGAACGTTTTCAGCCGTAGTGTCCCAATGAC
TTCATGTCGTACCCTAACCCCCACGTCGGCTTCACATGAGTCGCTAGCGC
AGTCAAAAAAGTGATAATTGCATACCCTACACACAATGCAACAgggccct
tctctccctgctgCAAACGTTGGGCGCACATGGGTGCGATGAGAAGACAC
GTGGGATGGAGATGGCCACCATTGACGCACCCATTACGCGCTGTCCTCTT
ACTCCTATTCCTGCACTGCAGGAGAGACGTAGCTCTCGCCTTCCGTTTTC
CCGGgaaccctttccttcccagcgCGCCTCGAAGCGTGCCGCAAGGGCAT
TCACCCCGCCCCAGAAGTCTTGTTCCGTCGTGCACAgccactacctcctc
caatAACAatcctcattcccttccaGACGACGTGGCCTCTCCCTCAGTAA
AGCCATCTTCcgcgccctgcctcccccaaTCACGGCTTTCTGTCCGCCCT
GCCAACAAAGCGGACCTTCGTCGCGTCGCTACCATGCAGGTGACCGAATA
TGGAGGCCAGGGCATTCTTTACCTCTGGCATTATTTGCAAGAACTTGATC
GTCTTCAAACCTCCTACTGGATCGATCCGTTCCACCACACCATGCTTGTG
GCCGTGGACAGCACTCCCTCTGCTTTTCGTCCCTTCTCCAGGATCTTTCA
ATCATGGGAcgctttttgggggggggaccCGCGCATTGTGGGTTTCGTCG
ACTTGGACGCCCGGGACCGGCGTGTGGACAAgaccacgcccacgccctaC
CTCTCCGACCTGATCGTGGAAGGTTCTCGAAGGGGGCAAGGCCTGGGTCG
GCAATTGATGGAAGCagcggaggacgaagcacGGCGATGGGGCTACCCAG
CCGTGTACTTGAAAGTGCGGAAGTGCAATGCGCGTGGTTTCGGGTTGTAC
GCCTCCCTGGGGTACGAGGTGCTGTGGGAATggccgggggagagggtgtg
gatgatgaggaagtgggtggtggacgaggaggacaggaaggaggcggtga
agaaggagagggaggggtgggaagggatggtAGGCGCGGTGATGATGCCG
TTCATgacgtgggcgggggaggagggaggaggaaaggaggggggggaaga
agggaaggaggtggggacggAGAACTTGGACGccagaaaagaaggaatgT
AGGTACAGGCAAGGGTGTCTGCATGCACATGTGAGGTTGCCGGACGAATG
GAGCCAGTCGTGAGGTTCCATGCCAGAGTCGCGTCCGAACATGATGCCCC
TGGAGCGCGGTGGGTGTCTTTACATAAGCGGTTGTCAAAAGAAAGTCATG
CACAAGTAAGCAACGTGAAAGCTTCGTC back to topCoding sequence (CDS) from alignment at CM002458.1:1195301..1196878+ >rna2221 ID=rna2221|Name=rna2221|organism=Nannochloropsis gaditana|type=CDS|length=1023bp|location=Sequence derived from alignment at CM002458.1:1195301..1196878+ (Nannochloropsis gaditana)
ATGGGTGCGATGAGAAGACACGTGGGATGGAGATGGCCACCATTGACGCA
CCCATTACGCGCTGTCCTCTTACTCCTATTCCTGCACTGCAGGAGAGACG
TAGCTCTCGCCTTCCGTTTTCCCGGgaaccctttccttcccagcgCGCCT
CGAAGCGTGCCGCAAGGGCATTCACCCCGCCCCAGAAGTCTTGTTCCGTC
GTGCACAgccactacctcctccaatAACAatcctcattcccttccaGACG
ACGTGGCCTCTCCCTCAGTAAAGCCATCTTCcgcgccctgcctcccccaa
TCACGGCTTTCTGTCCGCCCTGCCAACAAAGCGGACCTTCGTCGCGTCGC
TACCATGCAGGTGACCGAATATGGAGGCCAGGGCATTCTTTACCTCTGGC
ATTATTTGCAAGAACTTGATCGTCTTCAAACCTCCTACTGGATCGATCCG
TTCCACCACACCATGCTTGTGGCCGTGGACAGCACTCCCTCTGCTTTTCG
TCCCTTCTCCAGGATCTTTCAATCATGGGAcgctttttgggggggggacc
CGCGCATTGTGGGTTTCGTCGACTTGGACGCCCGGGACCGGCGTGTGGAC
AAgaccacgcccacgccctaCCTCTCCGACCTGATCGTGGAAGGTTCTCG
AAGGGGGCAAGGCCTGGGTCGGCAATTGATGGAAGCagcggaggacgaag
cacGGCGATGGGGCTACCCAGCCGTGTACTTGAAAGTGCGGAAGTGCAAT
GCGCGTGGTTTCGGGTTGTACGCCTCCCTGGGGTACGAGGTGCTGTGGGA
ATggccgggggagagggtgtggatgatgaggaagtgggtggtggacgagg
aggacaggaaggaggcggtgaagaaggagagggaggggtgggaagggatg
gtAGGCGCGGTGATGATGCCGTTCATgacgtgggcgggggaggagggagg
aggaaaggaggggggggaagaagggaaggaggtggggacggAGAACTTGG
ACGccagaaaagaaggaatgTAG back to top
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