EWM28460.1, cds2213 (CDS) Nannochloropsis gaditana

Overview
NameEWM28460.1
Unique Namecds2213
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1195680..1196702 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28460.1
Productgcn5-related n-acetyltransferase
Orig transcript idgnl|cribi|Naga_100617g3.7552.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1195680..1196702 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008080N-acetyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
IPR000182GNAT_dom
Homology
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|585110868|gb|EWM28460.1| (gcn5-related n-acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 698.353 bits (1801), Expect = 0.000e+0
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query:    1 MGAMRRHVGWRWPPLTHPLRAVLLLLFLHCRRDVALAFRFPGNPFLPSAPRSVPQGHSPRPRSLVPSCTATTSSNNNPHSLPDDVASPSVKPSSAPCLPQSRLSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRKWVVDEEDRKEAVKKEREGWEGMVGAVMMPFMTWAGEEGGGKEGGEEGKEVGTENLDARKEGM 340
            MGAMRRHVGWRWPPLTHPLRAVLLLLFLHCRRDVALAFRFPGNPFLPSAPRSVPQGHSPRPRSLVPSCTATTSSNNNPHSLPDDVASPSVKPSSAPCLPQSRLSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRKWVVDEEDRKEAVKKEREGWEGMVGAVMMPFMTWAGEEGGGKEGGEEGKEVGTENLDARKEGM
Sbjct:    1 MGAMRRHVGWRWPPLTHPLRAVLLLLFLHCRRDVALAFRFPGNPFLPSAPRSVPQGHSPRPRSLVPSCTATTSSNNNPHSLPDDVASPSVKPSSAPCLPQSRLSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRKWVVDEEDRKEAVKKEREGWEGMVGAVMMPFMTWAGEEGGGKEGGEEGKEVGTENLDARKEGM 340          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|299473094|emb|CBN77487.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 93.5893 bits (231), Expect = 2.799e-18
Identity = 60/165 (36.36%), Postives = 82/165 (49.70%), Query Frame = 0
Query:  103 LSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTS---YWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEV 264
            + ++PA   +LR V+ + V E+ G  I Y    L EL+RLQ +   Y  D   H ML+A                        D  + GFVD+D R++R  +T   PYLSDL V    R  G+G +L++A ED    WGY  +YLKVR+ N     LY +LGY V
Sbjct:   99 VEIKPAKFHNLRAVSRLLVAEFYGSTIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVE--------------------DGSLAGFVDIDGREKRPGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVV 243          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|397610581|gb|EJK60911.1| (hypothetical protein THAOC_18671 [Thalassiosira oceanica])

HSP 1 Score: 74.3294 bits (181), Expect = 3.455e-11
Identity = 65/210 (30.95%), Postives = 92/210 (43.81%), Query Frame = 0
Query:  100 QSRLSVRPANKADLRRVATMQVTEY--GGQGILYLWHYLQELDRLQTSY-WIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDAR--DRRVDKTT----------PTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYE----------VLWEWPGERVWMMRKWVVDEE 284
             S   VR A+  DL RVA +    +  G   +L    YL ELDRLQ ++ + D   H  L   D++                   GD  +VGF D+D R  +RR    +          P PYLSDL V  S R +G+ + LM  AE  AR  GY  +YL V   N     +Y+ +GYE           L     +R+ M+R+ +++ E
Sbjct:  165 NSSFQVRSASYDDLPRVAELMTDCFYPGLNAMLRPVRYLMELDRLQGNFPYDDIDRHYYLCVFDTST------------------GDC-LVGFCDIDGRILERRQGLVSALSPLGNVRRPQPYLSDLAVNSSWRRKGVAKTLMSKAERLAREMGYNELYLGVNGDNHLALQMYSKMGYEEIQPQGDMVAFLAVQKEKRMRMLRREILNSE 355          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|751565576|ref|WP_041034475.1| (N-acetyltransferase [Tolypothrix campylonemoides] >gi|750917228|gb|KIJ77116.1| GCN5 family acetyltransferase [Tolypothrix campylonemoides VB511288])

HSP 1 Score: 69.3218 bits (168), Expect = 2.488e-10
Identity = 58/189 (30.69%), Postives = 76/189 (40.21%), Query Frame = 0
Query:   82 PDDVASPSVKPSSAPCLPQSRLSVRPANKADLRRVATMQVTEYGGQGILYLWHY----LQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDAR--DRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEV 264
            P    S   KP SAP    S+  +R A  ADL  VA +    +  Q   + W +    L   + L+        HH  LVAVD T  A                    +VG V+L  R  D  +      PYLS+L V    R QG   +L+   E  A  WG+  +YL V + N     LY  LGY+V
Sbjct:    3 PSFFHSSHQKPVSAPVPASSQFQIRGAIAADLTGVAQIIAESFHSQNGFFGWLFPLLRLGIYEDLRHRLASPAPHHVCLVAVDRTADA-----------------ANNLVGTVELGVRFSDSWIQSGKSFPYLSNLAVHPKYRRQGAASELLTGCEKVALSWGFQDLYLHVLENNHHARQLYFKLGYQV 174          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|652334229|ref|WP_026731445.1| (N-acetyltransferase [Fischerella sp. PCC 9605])

HSP 1 Score: 67.3958 bits (163), Expect = 1.309e-9
Identity = 53/169 (31.36%), Postives = 71/169 (42.01%), Query Frame = 0
Query:  102 RLSVRPANKADLRRVATMQVTEYGGQGILYLWHY----LQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDAR--DRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEV 264
            R  +R A  ADL  VA +    +  Q   + W +    L   + L+        HH  LVAVD+T                  G    I G V+L  R  D   +     PYLS+L V    R QG   QL+EA++  AR WG+  +YL V + N +   LY   GY V
Sbjct:   24 RFLIRAATPADLTEVAQIIAESFHSQKGFWGWAFPLLRLGIYEDLRHRLASPAPHHVCLVAVDTTA-----------------GTANNIAGTVELGVRFSDYWTEAGRSFPYLSNLAVCSKYRRQGAASQLLEASDKVAREWGFEDIYLHVLENNHQAQQLYFKFGYRV 175          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|501264206|ref|WP_012307224.1| (MULTISPECIES: N-acetyltransferase [Synechococcus] >gi|169885888|gb|ACA99601.1| acetyltransferase, GNAT family [Synechococcus sp. PCC 7002])

HSP 1 Score: 64.6994 bits (156), Expect = 7.424e-9
Identity = 55/184 (29.89%), Postives = 79/184 (42.93%), Query Frame = 0
Query:   98 LPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
            L QS LS+RPA   D R +AT+    +   QG    W +L  L RL      +  HH +      T      F    Q+  A       IVG V++  R        P   PY+S+L V    R  G+ R+L+   E + R W Y +V L V + N     LY S GY++ +       W++R+
Sbjct:    3 LSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQTATA-----QEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPQYRRLGIARKLLARCETQVRYWHYGSVALHVLENNEAAKQLYLSCGYDIKYAERPLSAWLLRR 171          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|1046569018|gb|ANV87454.1| (acetyltransferase [Synechococcus sp. PCC 7117])

HSP 1 Score: 65.0846 bits (157), Expect = 8.150e-9
Identity = 56/189 (29.63%), Postives = 81/189 (42.86%), Query Frame = 0
Query:   93 SSAPCLPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
            S+   L QS LS+RPA   D R +AT+    +   QG    W +L  L RL      +  HH +      T      F    Q+  A       IVG V++  R        P   PY+S+L V    R  G+ R+L+   E + R W Y +V L V + N     LY S GY++ +       W++R+
Sbjct:   17 SADVALSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQTATA-----QEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPQYRRLGIARKLLARCETQVRYWHYGSVALHVLENNEAAKQLYLSCGYDIKYAERPLSAWLLRR 190          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|1184393079|emb|SMH29242.1| (Ribosomal protein S18 acetylase RimI [Synechococcus sp. OG1] >gi|1191924761|emb|SMQ83676.1| Ribosomal protein S18 acetylase RimI [Synechococcus sp. 7002])

HSP 1 Score: 65.0846 bits (157), Expect = 8.580e-9
Identity = 55/184 (29.89%), Postives = 79/184 (42.93%), Query Frame = 0
Query:   98 LPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
            L QS LS+RPA   D R +AT+    +   QG    W +L  L RL      +  HH +      T      F    Q+  A       IVG V++  R        P   PY+S+L V    R  G+ R+L+   E + R W Y +V L V + N     LY S GY++ +       W++R+
Sbjct:   21 LSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQTATA-----QEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPQYRRLGIARKLLARCETQVRYWHYGSVALHVLENNEAAKQLYLSCGYDIKYAERPLSAWLLRR 189          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|1046572170|gb|ANV90600.1| (acetyltransferase [Synechococcus sp. PCC 8807])

HSP 1 Score: 65.0846 bits (157), Expect = 8.891e-9
Identity = 55/184 (29.89%), Postives = 79/184 (42.93%), Query Frame = 0
Query:   98 LPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
            L QS LS+RPA   D R +AT+    +   QG    W +L  L RL      +  HH +      T      F    Q+  A       IVG V++  R        P   PY+S+L V    R  G+ R+L+   E + R W Y +V L V + N     LY S GY++ +       W++R+
Sbjct:   22 LSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQTATA-----QEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPQYRRLGIARKLLARCETQVRYWHYGSVALHVLENNEAAKQLYLSCGYDIKYAERPLSAWLLRR 190          
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|1180497132|ref|WP_083998063.1| (GNAT family N-acetyltransferase [Synechococcus sp. PCC 7003])

HSP 1 Score: 64.3142 bits (155), Expect = 1.075e-8
Identity = 55/189 (29.10%), Postives = 80/189 (42.33%), Query Frame = 0
Query:   93 SSAPCLPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
            S+   L QS LS+RPA   D R +AT+    +   QG    W +L  L RL      +  HH +      T      F    Q+          IVG V++  R        P   PY+S+L V    R  G+ R+L+   E + R W Y +V L V + N     LY S GY++ +       W++R+
Sbjct:    3 SADATLSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQT-----TTTEEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPEYRRLGIARKLLARCETQVRYWNYGSVALHVLENNQAAKQLYLSCGYDIKYAERPLSAWVLRR 176          
The following BLAST results are available for this feature:
BLAST of EWM28460.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110868|gb|EWM28460.1|0.000e+0100.00gcn5-related n-acetyltransferase [Nannochloropsis ... [more]
gi|299473094|emb|CBN77487.1|2.799e-1836.36conserved unknown protein [Ectocarpus siliculosus][more]
gi|397610581|gb|EJK60911.1|3.455e-1130.95hypothetical protein THAOC_18671 [Thalassiosira oc... [more]
gi|751565576|ref|WP_041034475.1|2.488e-1030.69N-acetyltransferase [Tolypothrix campylonemoides] ... [more]
gi|652334229|ref|WP_026731445.1|1.309e-931.36N-acetyltransferase [Fischerella sp. PCC 9605][more]
gi|501264206|ref|WP_012307224.1|7.424e-929.89MULTISPECIES: N-acetyltransferase [Synechococcus] ... [more]
gi|1046569018|gb|ANV87454.1|8.150e-929.63acetyltransferase [Synechococcus sp. PCC 7117][more]
gi|1184393079|emb|SMH29242.1|8.580e-929.89Ribosomal protein S18 acetylase RimI [Synechococcu... [more]
gi|1046572170|gb|ANV90600.1|8.891e-929.89acetyltransferase [Synechococcus sp. PCC 8807][more]
gi|1180497132|ref|WP_083998063.1|1.075e-829.10GNAT family N-acetyltransferase [Synechococcus sp.... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2221rna2221Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications