EWM28460.1, cds2213 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|585110868|gb|EWM28460.1| (gcn5-related n-acetyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 698.353 bits (1801), Expect = 0.000e+0 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query: 1 MGAMRRHVGWRWPPLTHPLRAVLLLLFLHCRRDVALAFRFPGNPFLPSAPRSVPQGHSPRPRSLVPSCTATTSSNNNPHSLPDDVASPSVKPSSAPCLPQSRLSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRKWVVDEEDRKEAVKKEREGWEGMVGAVMMPFMTWAGEEGGGKEGGEEGKEVGTENLDARKEGM 340
MGAMRRHVGWRWPPLTHPLRAVLLLLFLHCRRDVALAFRFPGNPFLPSAPRSVPQGHSPRPRSLVPSCTATTSSNNNPHSLPDDVASPSVKPSSAPCLPQSRLSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRKWVVDEEDRKEAVKKEREGWEGMVGAVMMPFMTWAGEEGGGKEGGEEGKEVGTENLDARKEGM
Sbjct: 1 MGAMRRHVGWRWPPLTHPLRAVLLLLFLHCRRDVALAFRFPGNPFLPSAPRSVPQGHSPRPRSLVPSCTATTSSNNNPHSLPDDVASPSVKPSSAPCLPQSRLSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRKWVVDEEDRKEAVKKEREGWEGMVGAVMMPFMTWAGEEGGGKEGGEEGKEVGTENLDARKEGM 340
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|299473094|emb|CBN77487.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 93.5893 bits (231), Expect = 2.799e-18 Identity = 60/165 (36.36%), Postives = 82/165 (49.70%), Query Frame = 0
Query: 103 LSVRPANKADLRRVATMQVTEYGGQGILYLWHYLQELDRLQTS---YWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEV 264
+ ++PA +LR V+ + V E+ G I Y L EL+RLQ + Y D H ML+A D + GFVD+D R++R +T PYLSDL V R G+G +L++A ED WGY +YLKVR+ N LY +LGY V
Sbjct: 99 VEIKPAKFHNLRAVSRLLVAEFYGSTIWYPAQCLVELNRLQENFHGYGEDASRHLMLLATSVE--------------------DGSLAGFVDIDGREKRPGQTGVRPYLSDLAVADRYRRMGIGTELVKACEDACIEWGYDNMYLKVREGNVAAEKLYENLGYVV 243
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|397610581|gb|EJK60911.1| (hypothetical protein THAOC_18671 [Thalassiosira oceanica]) HSP 1 Score: 74.3294 bits (181), Expect = 3.455e-11 Identity = 65/210 (30.95%), Postives = 92/210 (43.81%), Query Frame = 0
Query: 100 QSRLSVRPANKADLRRVATMQVTEY--GGQGILYLWHYLQELDRLQTSY-WIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDAR--DRRVDKTT----------PTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYE----------VLWEWPGERVWMMRKWVVDEE 284
S VR A+ DL RVA + + G +L YL ELDRLQ ++ + D H L D++ GD +VGF D+D R +RR + P PYLSDL V S R +G+ + LM AE AR GY +YL V N +Y+ +GYE L +R+ M+R+ +++ E
Sbjct: 165 NSSFQVRSASYDDLPRVAELMTDCFYPGLNAMLRPVRYLMELDRLQGNFPYDDIDRHYYLCVFDTST------------------GDC-LVGFCDIDGRILERRQGLVSALSPLGNVRRPQPYLSDLAVNSSWRRKGVAKTLMSKAERLAREMGYNELYLGVNGDNHLALQMYSKMGYEEIQPQGDMVAFLAVQKEKRMRMLRREILNSE 355
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|751565576|ref|WP_041034475.1| (N-acetyltransferase [Tolypothrix campylonemoides] >gi|750917228|gb|KIJ77116.1| GCN5 family acetyltransferase [Tolypothrix campylonemoides VB511288]) HSP 1 Score: 69.3218 bits (168), Expect = 2.488e-10 Identity = 58/189 (30.69%), Postives = 76/189 (40.21%), Query Frame = 0
Query: 82 PDDVASPSVKPSSAPCLPQSRLSVRPANKADLRRVATMQVTEYGGQGILYLWHY----LQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDAR--DRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEV 264
P S KP SAP S+ +R A ADL VA + + Q + W + L + L+ HH LVAVD T A +VG V+L R D + PYLS+L V R QG +L+ E A WG+ +YL V + N LY LGY+V
Sbjct: 3 PSFFHSSHQKPVSAPVPASSQFQIRGAIAADLTGVAQIIAESFHSQNGFFGWLFPLLRLGIYEDLRHRLASPAPHHVCLVAVDRTADA-----------------ANNLVGTVELGVRFSDSWIQSGKSFPYLSNLAVHPKYRRQGAASELLTGCEKVALSWGFQDLYLHVLENNHHARQLYFKLGYQV 174
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|652334229|ref|WP_026731445.1| (N-acetyltransferase [Fischerella sp. PCC 9605]) HSP 1 Score: 67.3958 bits (163), Expect = 1.309e-9 Identity = 53/169 (31.36%), Postives = 71/169 (42.01%), Query Frame = 0
Query: 102 RLSVRPANKADLRRVATMQVTEYGGQGILYLWHY----LQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDAR--DRRVDKTTPTPYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEV 264
R +R A ADL VA + + Q + W + L + L+ HH LVAVD+T G I G V+L R D + PYLS+L V R QG QL+EA++ AR WG+ +YL V + N + LY GY V
Sbjct: 24 RFLIRAATPADLTEVAQIIAESFHSQKGFWGWAFPLLRLGIYEDLRHRLASPAPHHVCLVAVDTTA-----------------GTANNIAGTVELGVRFSDYWTEAGRSFPYLSNLAVCSKYRRQGAASQLLEASDKVAREWGFEDIYLHVLENNHQAQQLYFKFGYRV 175
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|501264206|ref|WP_012307224.1| (MULTISPECIES: N-acetyltransferase [Synechococcus] >gi|169885888|gb|ACA99601.1| acetyltransferase, GNAT family [Synechococcus sp. PCC 7002]) HSP 1 Score: 64.6994 bits (156), Expect = 7.424e-9 Identity = 55/184 (29.89%), Postives = 79/184 (42.93%), Query Frame = 0
Query: 98 LPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
L QS LS+RPA D R +AT+ + QG W +L L RL + HH + T F Q+ A IVG V++ R P PY+S+L V R G+ R+L+ E + R W Y +V L V + N LY S GY++ + W++R+
Sbjct: 3 LSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQTATA-----QEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPQYRRLGIARKLLARCETQVRYWHYGSVALHVLENNEAAKQLYLSCGYDIKYAERPLSAWLLRR 171
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|1046569018|gb|ANV87454.1| (acetyltransferase [Synechococcus sp. PCC 7117]) HSP 1 Score: 65.0846 bits (157), Expect = 8.150e-9 Identity = 56/189 (29.63%), Postives = 81/189 (42.86%), Query Frame = 0
Query: 93 SSAPCLPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
S+ L QS LS+RPA D R +AT+ + QG W +L L RL + HH + T F Q+ A IVG V++ R P PY+S+L V R G+ R+L+ E + R W Y +V L V + N LY S GY++ + W++R+
Sbjct: 17 SADVALSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQTATA-----QEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPQYRRLGIARKLLARCETQVRYWHYGSVALHVLENNEAAKQLYLSCGYDIKYAERPLSAWLLRR 190
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|1184393079|emb|SMH29242.1| (Ribosomal protein S18 acetylase RimI [Synechococcus sp. OG1] >gi|1191924761|emb|SMQ83676.1| Ribosomal protein S18 acetylase RimI [Synechococcus sp. 7002]) HSP 1 Score: 65.0846 bits (157), Expect = 8.580e-9 Identity = 55/184 (29.89%), Postives = 79/184 (42.93%), Query Frame = 0
Query: 98 LPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
L QS LS+RPA D R +AT+ + QG W +L L RL + HH + T F Q+ A IVG V++ R P PY+S+L V R G+ R+L+ E + R W Y +V L V + N LY S GY++ + W++R+
Sbjct: 21 LSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQTATA-----QEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPQYRRLGIARKLLARCETQVRYWHYGSVALHVLENNEAAKQLYLSCGYDIKYAERPLSAWLLRR 189
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|1046572170|gb|ANV90600.1| (acetyltransferase [Synechococcus sp. PCC 8807]) HSP 1 Score: 65.0846 bits (157), Expect = 8.891e-9 Identity = 55/184 (29.89%), Postives = 79/184 (42.93%), Query Frame = 0
Query: 98 LPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
L QS LS+RPA D R +AT+ + QG W +L L RL + HH + T F Q+ A IVG V++ R P PY+S+L V R G+ R+L+ E + R W Y +V L V + N LY S GY++ + W++R+
Sbjct: 22 LSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQTATA-----QEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPQYRRLGIARKLLARCETQVRYWHYGSVALHVLENNEAAKQLYLSCGYDIKYAERPLSAWLLRR 190
BLAST of EWM28460.1 vs. NCBI_GenBank
Match: gi|1180497132|ref|WP_083998063.1| (GNAT family N-acetyltransferase [Synechococcus sp. PCC 7003]) HSP 1 Score: 64.3142 bits (155), Expect = 1.075e-8 Identity = 55/189 (29.10%), Postives = 80/189 (42.33%), Query Frame = 0
Query: 93 SSAPCLPQSRLSVRPANKADLRRVATMQVTEYGG-QGILYLWHYLQELDRLQTSYWIDPFHHTMLVAVDSTPSAFRPFSRIFQSWDAFWGGDPRIVGFVDLDARDRRVDKTTPT--PYLSDLIVEGSRRGQGLGRQLMEAAEDEARRWGYPAVYLKVRKCNARGFGLYASLGYEVLWEWPGERVWMMRK 278
S+ L QS LS+RPA D R +AT+ + QG W +L L RL + HH + T F Q+ IVG V++ R P PY+S+L V R G+ R+L+ E + R W Y +V L V + N LY S GY++ + W++R+
Sbjct: 3 SADATLSQSTLSIRPATLEDARALATVLTHSFHHYQGT---WGWLTPLLRLGV---YEDLHHRL----KQTKEHHACFVAAMQT-----TTTEEIVGTVEISVRYLNALAIAPAKAPYISNLAVNPEYRRLGIARKLLARCETQVRYWNYGSVALHVLENNQAAKQLYLSCGYDIKYAERPLSAWVLRR 176 The following BLAST results are available for this feature:
BLAST of EWM28460.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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