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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100617g1.7551.mrna |
| Orig protein id | gnl|cribi|Naga_100617g1.7551 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1191574..1193075 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2219 ID=rna2219|Name=rna2219|organism=Nannochloropsis gaditana|type=mRNA|length=715bp
CTCCCTCCCTCCCTCCTTCTCCTTATCCACCGCCAACCCCCTTTCCCAGC
ATTTCTTGACACCTTCGTAGAGGCGGCGATCGCGCAAGCGGGATATTTCG
ATCAACAGCATCTGGCCAATTTCTGGCTGGGGTGTGCAAATTTGAATTAT
GGGCCGTCCAAGGCATACTGGGCGGCATGTCGAGAGGCCCTGGAGGGGGA
CCGGGTACTGTCCTCCCTATCCCTCTTTGAGACCAGCACGCTCTTGCACG
CGTTGGCGGTGATGGATGTGGAAGAAAGCCGTTCCCTCCTGGCTCCGCTT
GTGGGGCGGGCGACCGAGGAGATGCGGAGGCGGCGGGAGCAGGAGCGGGA
CCGAGCCAAAAGGCGGGAGATGGACGTGGAGACGGAAAGCGCCTTAAGGC
AACTGCACCAGACGTATCTGTATCTACAGGTTTTGAGACGGGAGCGAGAA
GATGGAAGGGAGGGCGGGGGGAGGGCAGGGGGGAGGGTGAGAGAGAGGAG
CCGGTGGTGGGGGAGGTGACGCCGGCAGCCTTGGGCGCGTTTGGTCGCTT
GATAAAAGAGGTGTGGGACGAAAGCTCGCATTTGCTCAGTTTCCGGATAC
GGACCTCGGAATTCCAACGAGACGTGCAGCACGTGGCAGAGAGCATGGGG
TTGTGTTGCCTCCCCGAGGCCCGCGACGGGCCTTTTACCCTCGACATGGT
CATCGTGCCCGTGTC back to topprotein sequence of rna2219 >rna2219-protein ID=rna2219-protein|Name=rna2219|organism=Nannochloropsis gaditana|type=polypeptide|length=468bp
MTLKNSSTLQLRRRRKRVINVISIFVYTWPFCGGAFHAWQPRALLYPYSQ
GPPTKTRPPPKLHASSPIPSSLDDSEVPSRISHLEEAPGISKHPAPRVFR
DGASLEGVGRGRTPSSSLPVASGDTALLLPPKKTRHAAWHRNMDISTKRS
SPVATKKTPRLGKPAHLPGRPPRAQDGPRTGPRTQQNGTGAGGTAFTLPC
HRDINKELLRRGADAEKLLKYADAMGVGMNSVNVATCLNRLSKAWSPRHG
PTRPSPAQDPRLRRLLLHTHTCLPECQAAELSIILNGVSKLGLDPGPGFW
RTSRDLSLALLPTLDQNAHFVQILNAYSRARFPPGQAWVQAFVLASAPSL
PSWTARELASLVNSLGNLRPAGVHCAYLTRLRDAVLACVQGGGMPARELA
TCLSGFGKMATGPHLPPPSPCAPAFHPGRPLLDAMVEASFPLLETFDPQG
LAALINGFVHLRYCPGRR back to topmRNA from alignment at CM002458.1:1191574..1193075- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2219 ID=rna2219|Name=rna2219|organism=Nannochloropsis gaditana|type=mRNA|length=1502bp|location=Sequence derived from alignment at CM002458.1:1191574..1193075- (Nannochloropsis gaditana)
GATGTCAACGGGCAGCTCAGGATTCAGCTGTTGTCCTGCCAGCATGCACC
AGTAGTCTCGGGCGGACAGGAAGCTAGCGACTGAGGGAGGGGAAACATGA
CCTTGAAAAACTCCAGCACCCTTCAGTTAAGACGGCGGCGGAAGCGCGTT
ATCAATGTGATATCCATATTTGTATACACCTGGCCTTTTTGTGGAGGTGC
TTTTCATGCCTGGCAGCCCCGCGCCCTCCTCTACCCGTACTCGCAAGGCC
CGCCGACTAAGACCCGCCCCCCGCCCAAATTGCACGCTTCCTCCCCGATA
CCTTCATCTCTGGATGATTCGGAGGTCCCCAGTCGCATAAGTCATTTGGA
AGAAGCACCTGGCATTTCGAAACATCCTGCGCCTCGGGTGTTCAGGGACG
GCGCAAGTCTGGAAGGCGTTGGCCGGGGGCGAACTCCCTCTTCCTCGTTG
CCCGTCGCGTCGGGAGATACCGCGTTGCTTTTGCCGCCAAAAAAGACAAG
GCACGCAGCATGGCATCGAAACATGGATATTTCCACGAAAAGATCGAGTC
CCGTCGCCACAAAGAAAACGCCGCGTCTGGGAAAGCCAGCGCACTTGCCG
GGTCGACCTCCTCGGGCACAAGACGGACCTCGCACGGGACCCCGGACGCA
GCAGAATGGAACAGGAGCTGGCGGCACGGCGTTCACGTTGCCATGCCACC
GAGACATCAACAAAGAGCTCCTTCGCCGCGGGGCCGATGCCGAGAAACTG
CTGAAGTATGCGGACGCCATGGGCGTGGGGATGAACAGCGTCAACGTGGC
TACCTGCCTGAACCGTCTCTCCAAAGCCTGGAGCCCCCGCCACGGCCCGA
CACGGCCCTCGCCGGCCCAGGACCCCCGTCTGCGCCGCCTCCTCCTCCAT
ACCCACACTTGCCTCCCGGAGTGCCAGGCTGCGGAGTTGAGCATCATCCT
GAACGGCGTAAGCAAGCTGGGTCTCGATCCGGGCCCAGGGTTTTGGCGCA
CTTCCCGCGACCTGTCCCTCGCCCTCCTACCCACCTTGGACCAAAACGCC
CACTTTGTCCAGATTTTGAACGCCTACAGCCGGGCCCGCTTTCCCCCGGG
ACAGGCGTGGGTGCAGGCCTTTGTCCTGGCGTCCGCCCCCTCCCTCCCGT
CCTGGACCGCGCGGGAATTGGCTTCCTTGGTCAATTCCCTGGGCAATTTG
CGGCCAGCGGGCGTACACTGTGCCTACTTGACGCGCCTACGGGACGCGGT
CTTGGCTTGCGTGCAAGGAGGGGGGATGCCGGCGCGGGAGTTGGCTACCT
GCTTGAGTGGCTTTGGCAAAATGGCCACGGGCCCGCACCTCCCCCCGCCC
TCGCCCTGTGCCCCCGCCTTCCACCCCGGCCGTCCGCTCTTGGATGCGAT
GGTGGAGGCCTCTTTCCCTTTGCTGGAGACATTCGATCCTCAGGGCTTGG
CGGCCCTGATCAACGGGTTCGTGCACTTGCGATATTGCCCGGGGCGGAGG
GA back to topCoding sequence (CDS) from alignment at CM002458.1:1191574..1193075- >rna2219 ID=rna2219|Name=rna2219|organism=Nannochloropsis gaditana|type=CDS|length=1406bp|location=Sequence derived from alignment at CM002458.1:1191574..1193075- (Nannochloropsis gaditana)
ATGACCTTGAAAAACTCCAGCACCCTTCAGTTAAGACGGCGGCGGAAGCG
CGTTATCAATGTGATATCCATATTTGTATACACCTGGCCTTTTTGTGGAG
GTGCTTTTCATGCCTGGCAGCCCCGCGCCCTCCTCTACCCGTACTCGCAA
GGCCCGCCGACTAAGACCCGCCCCCCGCCCAAATTGCACGCTTCCTCCCC
GATACCTTCATCTCTGGATGATTCGGAGGTCCCCAGTCGCATAAGTCATT
TGGAAGAAGCACCTGGCATTTCGAAACATCCTGCGCCTCGGGTGTTCAGG
GACGGCGCAAGTCTGGAAGGCGTTGGCCGGGGGCGAACTCCCTCTTCCTC
GTTGCCCGTCGCGTCGGGAGATACCGCGTTGCTTTTGCCGCCAAAAAAGA
CAAGGCACGCAGCATGGCATCGAAACATGGATATTTCCACGAAAAGATCG
AGTCCCGTCGCCACAAAGAAAACGCCGCGTCTGGGAAAGCCAGCGCACTT
GCCGGGTCGACCTCCTCGGGCACAAGACGGACCTCGCACGGGACCCCGGA
CGCAGCAGAATGGAACAGGAGCTGGCGGCACGGCGTTCACGTTGCCATGC
CACCGAGACATCAACAAAGAGCTCCTTCGCCGCGGGGCCGATGCCGAGAA
ACTGCTGAAGTATGCGGACGCCATGGGCGTGGGGATGAACAGCGTCAACG
TGGCTACCTGCCTGAACCGTCTCTCCAAAGCCTGGAGCCCCCGCCACGGC
CCGACACGGCCCTCGCCGGCCCAGGACCCCCGTCTGCGCCGCCTCCTCCT
CCATACCCACACTTGCCTCCCGGAGTGCCAGGCTGCGGAGTTGAGCATCA
TCCTGAACGGCGTAAGCAAGCTGGGTCTCGATCCGGGCCCAGGGTTTTGG
CGCACTTCCCGCGACCTGTCCCTCGCCCTCCTACCCACCTTGGACCAAAA
CGCCCACTTTGTCCAGATTTTGAACGCCTACAGCCGGGCCCGCTTTCCCC
CGGGACAGGCGTGGGTGCAGGCCTTTGTCCTGGCGTCCGCCCCCTCCCTC
CCGTCCTGGACCGCGCGGGAATTGGCTTCCTTGGTCAATTCCCTGGGCAA
TTTGCGGCCAGCGGGCGTACACTGTGCCTACTTGACGCGCCTACGGGACG
CGGTCTTGGCTTGCGTGCAAGGAGGGGGGATGCCGGCGCGGGAGTTGGCT
ACCTGCTTGAGTGGCTTTGGCAAAATGGCCACGGGCCCGCACCTCCCCCC
GCCCTCGCCCTGTGCCCCCGCCTTCCACCCCGGCCGTCCGCTCTTGGATG
CGATGGTGGAGGCCTCTTTCCCTTTGCTGGAGACATTCGATCCTCAGGGC
TTGGCGGCCCTGATCAACGGGTTCGTGCACTTGCGATATTGCCCGGGGCG
GAGGGA back to top
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