rna2206, rna2206 (mRNA) Nannochloropsis gaditana

Overview
Namerna2206
Unique Namerna2206
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length780
Alignment locationCM002458.1:1161065..1161949 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100190g13.3114.mrna
Orig protein idgnl|cribi|Naga_100190g13.3114
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1161065..1161949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100190g13gene2109Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2206rna2206-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28463.1cds2198Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2206 ID=rna2206|Name=rna2206|organism=Nannochloropsis gaditana|type=mRNA|length=780bp
TCTGATTACCCTCCCCCCTCGATGGTTTACGATCCAACTTACCCGGCTTC
AACGCACCGGAACGCCACATTCACGTTTCAATTCCCCGACAAAGCAACAA
ACTAGGGGCATGCCTTTGGGAAAGCGTCGCCCACTTTTTACCTACGACCT
GCCTTGGCCTGAAATGCAAGGTAGGGAGGTAAACTCTCCACCAGAAGGCC
AACTCACTCTTTCTTTCTTTTTTCACGCGAACCCCTCCTTGTCCTTCATG
GCCTGCCAGGCGTCTTGCGTCGGAAAGGGTACCGCAAGGCAGGAGAACTT
CGGGAGGCCTTGGAACCTGGAAATGCTTCCTCTTGCCCACCTTTGACGGC
AGTGGACCTCGCCACCCCAGACTTTACACCCACATCCGCGGACATGGACC
GGGTCCGGGACGTTCTCAACAGAGGTTGCGCTGCTGGCAGGCCCTCCTCC
TCCTCCACCACCACCACCACCACCACCACCACCTCCTCTCCTCTTCCACT
TCCCACCTCCGCTTTCGCCCTCTACCAAAGCACGCGGGCCCCCGGCATGA
GCGTCGGCTCCAAAATCATCACCTTCTGTCGGGCGATCGACACCGTGCTC
GGGGGCGGCCTGGCTCGAGGACAGCTCTCCGAGGTGGTGGGGGTGCCCGG
CGCGGGCAAGACCCAATTAGCCATGCAAGTAGCCATCGACGTACAGATTC
CCCGCTCTTTCCGCGGGGTTGGGGGCAAAGCGGTGTACATTGGTGAGGGA
GGGGGGCCGGGGGAGGGCGGCGGAGGTTGA
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protein sequence of rna2206

>rna2206-protein ID=rna2206-protein|Name=rna2206|organism=Nannochloropsis gaditana|type=polypeptide|length=231bp
VQRGGDDLSSLHDPVHVPPLCHSTVSSLPPTLPPFSPAFNAARPRLPPLT
LPPFFSPLHSSLPPPARVPHHLSHTCFPPSRSITDGQRSSNTRASPGRWQ
AFGVSLSQFSPLDLETSFLHPSVSMSQTLPLPPSPCPTLRTTPSPSSLCR
RPLFLSPQHAPWGSHTSSSLPPFPRTVCPLGVRDVLPSSSSSSSSSQTRQ
HLSSSHQHTLQEQPLSHQPPQVQQPSHIQPH
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mRNA from alignment at CM002458.1:1161065..1161949+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2206 ID=rna2206|Name=rna2206|organism=Nannochloropsis gaditana|type=mRNA|length=885bp|location=Sequence derived from alignment at CM002458.1:1161065..1161949+ (Nannochloropsis gaditana)
GTACAGAGAGGGGGCGACGACCTGTCTTCTCTCCACGACCCCGTCCACGT
CCCCCCTCTCTGTCACTCTAcggtgtcctccctccctcctacacttcccc
ccttttctcctgctTTCAACGCGgcgcgtcctcgtcttcctcccttgaca
ttgcctcccttcttctcgcctctccattcttcccttcctccccccgcccg
cgtccCTCACCACCTATCCCATacgtgcttccccccctccagatCAATCA
CCGACGGGCAACGCTCCTCAAACACCCGGGCCAGCCCCGGGCGGTGGCAA
GCTTTCGGAGTAAGCCTTTCTCAATTTTCTCCCCTTGATTTGGAGACCTC
TTTTCTGCATCCCTCAGTGTCCATGTcccagaccctccctctccctccct
ctccttgccccaccctccgcaccacgccttccccctcctccctatgTCGc
cggcctctcttcctttcccctcaacACGCCCCTTGGGGGTCacacacctc
ctcctccctgcctccattcccgcGCACAGTCTGTCCTCTGGGCGTGCGGG
acgttcttccctcctcctcctcctcttcctcctcctcccagacgcGACAA
CACCTGTCCTCAAGCCATCAGCACACACTACAAGAGCAACCGTTGTCACA
TCAACCACCGCAAGTACAGCAGCCATCCCACATACAACCGCACTAATAGC
TACGACAGCGTTACTGTACATCGAACGAgacaagaggaagcaagTCGAGA
TCGTTCAAAGTTGACGGATGTAGTTGCcggcaagaaaaagcaggCCCGAA
AGCTTTTTCTTGACCGGGAGCCGGGGAGTAAGAGCACGAGACGGCTGTTC
GTGCATAAAGAAACAACTTCTCTGACATCCTCGTG
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Coding sequence (CDS) from alignment at CM002458.1:1161065..1161949+

>rna2206 ID=rna2206|Name=rna2206|organism=Nannochloropsis gaditana|type=CDS|length=696bp|location=Sequence derived from alignment at CM002458.1:1161065..1161949+ (Nannochloropsis gaditana)
GTACAGAGAGGGGGCGACGACCTGTCTTCTCTCCACGACCCCGTCCACGT
CCCCCCTCTCTGTCACTCTAcggtgtcctccctccctcctacacttcccc
ccttttctcctgctTTCAACGCGgcgcgtcctcgtcttcctcccttgaca
ttgcctcccttcttctcgcctctccattcttcccttcctccccccgcccg
cgtccCTCACCACCTATCCCATacgtgcttccccccctccagatCAATCA
CCGACGGGCAACGCTCCTCAAACACCCGGGCCAGCCCCGGGCGGTGGCAA
GCTTTCGGAGTAAGCCTTTCTCAATTTTCTCCCCTTGATTTGGAGACCTC
TTTTCTGCATCCCTCAGTGTCCATGTcccagaccctccctctccctccct
ctccttgccccaccctccgcaccacgccttccccctcctccctatgTCGc
cggcctctcttcctttcccctcaacACGCCCCTTGGGGGTCacacacctc
ctcctccctgcctccattcccgcGCACAGTCTGTCCTCTGGGCGTGCGGG
acgttcttccctcctcctcctcctcttcctcctcctcccagacgcGACAA
CACCTGTCCTCAAGCCATCAGCACACACTACAAGAGCAACCGTTGTCACA
TCAACCACCGCAAGTACAGCAGCCATCCCACATACAACCGCACTAA
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Synonyms
Publications