EWM28463.1, cds2198 (CDS) Nannochloropsis gaditana

Overview
NameEWM28463.1
Unique Namecds2198
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1161065..1161760 +

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Properties
Property NameValue
Start range1161065
Start range.
Protein idEWM28463.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100190g13.3114.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1161065..1161760 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28463.1 vs. NCBI_GenBank
Match: gi|585110873|gb|EWM28463.1| (hypothetical protein Naga_100190g13, partial [Nannochloropsis gaditana])

HSP 1 Score: 430.254 bits (1105), Expect = 8.787e-152
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0 
Query:    1 VQRGGDDLSSLHDPVHVPPLCHSTVSSLPPTLPPFSPAFNAARPRLPPLTLPPFFSPLHSSLPPPARVPHHLSHTCFPPSRSITDGQRSSNTRASPGRWQAFGVSLSQFSPLDLETSFLHPSVSMSQTLPLPPSPCPTLRTTPSPSSLCRRPLFLSPQHAPWGSHTSSSLPPFPRTVCPLGVRDVLPSSSSSSSSSQTRQHLSSSHQHTLQEQPLSHQPPQVQQPSHIQPH 231
            VQRGGDDLSSLHDPVHVPPLCHSTVSSLPPTLPPFSPAFNAARPRLPPLTLPPFFSPLHSSLPPPARVPHHLSHTCFPPSRSITDGQRSSNTRASPGRWQAFGVSLSQFSPLDLETSFLHPSVSMSQTLPLPPSPCPTLRTTPSPSSLCRRPLFLSPQHAPWGSHTSSSLPPFPRTVCPLGVRDVLPSSSSSSSSSQTRQHLSSSHQHTLQEQPLSHQPPQVQQPSHIQPH
Sbjct:    1 VQRGGDDLSSLHDPVHVPPLCHSTVSSLPPTLPPFSPAFNAARPRLPPLTLPPFFSPLHSSLPPPARVPHHLSHTCFPPSRSITDGQRSSNTRASPGRWQAFGVSLSQFSPLDLETSFLHPSVSMSQTLPLPPSPCPTLRTTPSPSSLCRRPLFLSPQHAPWGSHTSSSLPPFPRTVCPLGVRDVLPSSSSSSSSSQTRQHLSSSHQHTLQEQPLSHQPPQVQQPSHIQPH 231
The following BLAST results are available for this feature:
BLAST of EWM28463.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110873|gb|EWM28463.1|8.787e-152100.00hypothetical protein Naga_100190g13, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2206rna2206Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications