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Properties
| Property Name | Value |
|---|
| Product | gtp-binding protein 1 |
| Orig transcript id | gnl|cribi|Naga_100058g14.4265.mrna |
| Orig protein id | gnl|cribi|Naga_100058g14.4265 |
| Gene | GTPBP1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1101803..1104428 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2187 ID=rna2187|Name=rna2187|organism=Nannochloropsis gaditana|type=mRNA|length=3639bp
TCGACGGCGTGAAGAAGAACACATCCGTTTCTTGAATGTGAAGGCTTCAG
CCTTGTACAACTTAAAGTGTCTTACAGTTTTCAACGTACAATTAGGACGA
CATGGAAAAAAGAAGCATGTCAGGAGTTGGAAAGTCTATAAGAGAAATAC
ATAAGGGAGAAACCGCACCATCGACACAAGATCTCCTTCAGGCCAGCGCG
TCAGGCTCGTTGCGAACGGCGAGTACTCTTCGTTCGTTTGGCCACAATTA
CCTGTCCCACGCGATAAACCAGCAACTCAGCTTACTGGCGGTACCAGATG
GCCCCGAAATTCACCTGTATCACTACTGCCCCGACCGGCCTCCTCGACCA
ATGAGATGCGTTCTACGCCCTCCGCCCACCCCACTAGATAGACGAGGTGA
GGGCACTTTCCTCGGAGGCAGCGGCAAGGGAATCGATCGAGACCACATGA
ATGCCCTCCATGTGAGCTGGTGTCCCGATGCAGCCGTGCCCAGCAATCTG
CTTGCCGTCACTTGGCCTTCAACCCTGGTAATTTACCACATAGAGCTGGA
GGCGCCGTCATCGGCGTCGTTTGCGACCTCAACAGATGGTGAAGAGGGGC
CACGTCTAGAAGAAGCATCCATCTCAGACGAAGTGCAGGCAAAGGTGCTT
ACACAGGTCAAGCTCGGTCGCAAGCCAATGGGCCTGTTGTGGCACCCGAC
GGCGGCGCGTCCCCTCTTGTGCCTGTACGACATCACGGAAATCACCCTCC
TCCAGCTATCGCGAGGTGAGAGGGAGTTTCCCCCTCCCTCTTCCCCCGCC
GCGTCCTCGCTGTCTGCACCTGTGGATCAAGGGCCCTTCTACACGTCCTC
CTTCACCCCAGCCCTCCCTGGGGCCTTGGAGGCGGCAGCCTGGAGCTTGC
ACGGGCGGCACTTGGCCGTGTGCATGGAGGGGGTCCTGCGCGTTTACGAT
TGGCCGACGAGCTCTGTCCTGGACCTTCCCGGCCTGGACGTTTCTGCTTT
CACGTACGTGGACACCCCGCTTCGAAAACGCGTCCGGGCAGTGCGTCCTG
CGGGGCCGCACAGCTTTGCTGCCACCAGCGACACGGACCTCAGCCTGATC
GATCCCCGGGGGGGCGGGGCGCCGGCGCCGTTTTCCCAGAGTCGAAGCCG
TCCCAGCACGCCCCGGGGCAGCCCGTTCCCTCCCTCCAGCCCTGGTCCTA
CCCGGGTGCTGCCCCCAGCCTGCCGAGGCTCCCTCCACGTCATCCACGCG
CCCGCCCGCCCCGCCCCCCCCCCGCCCGGACGGCTCAACCCCTTCTCCCA
TCCCGTCCAGATTGACACCGGGGCCCTTCCCCACATCGCCATGCCGGACC
TCTTGGCCGTCCGGTTCCTGGGGACCTCCTCGCCCGGCGAGTCCTCCACG
CATGCCCTGGTCGCCGTCGGGAGCCACACCTCGGACACAATCACCCTCCT
CCGTCTCGGTGGCCTGTCCTCCCTCGAGGCCTCCGCCCCGTCCTCGTCCG
CCGCGGGCATCCACACCCTCTTCACCCTCACCTTGCCCCCACTTACGCGC
CCCAAGGGCCTGGCCTTGCTCGGCTCCCGCCTCCTTCTTCTCACCGGCAC
CCGCGAGGGGGAGAGAGTGGCCCATATTGCCTCCTCGTTCGGGCAGTTCA
ACGCCCACCTGAGCATTGTCAACCTGCCTCCATCCGTTTACCACCCTACC
CATTGCCCCAGTGCCCCCAGGCGCTACCGCATTCCCTTCCTCGGCATCCC
ACGGCCTTCTCGCCCCTCTTCTCCTGCGCGGCTTCGCAGCTCGGACGCCG
ATGCCGGAAAACCCCGACGGCCGGCCAGCAGCCTGGCGGCCGTCATGGGC
CGCCCTTTTCCCTTTCCTTGCCCCTCGCCGTTGTCGCACCTCTCCTCCCG
GCCTCTCCCTCCCCCGGGCACGCCCACTGGCAGCAGGGCCCCGTCGCGCA
TGTATCCCGTGCCGCCGGTTCCTGTCATCCCTTCCCACACCGTCCCCGCC
CCGACTGTCCGGGGAACGCGACCCGGAGGAGAGGCCCCTGAGCATGCCCA
CGCGTTCCACCCGCCACGCCCACCTTCCTGGACAAGCCATACTGGCGCCC
AACGTTCACCCTCGCCCTCGGTAACCTCCCCGGGAAATCCTGTCGGCCGC
ATGGGAAGGGGTGAGGGCAACGGGAGCAGGCAGCACCTTGGTCTTGACGC
TCGCGCCCCCCCTCCGGTGGGGAACAGCAGGCACAGACCGCTCTCCACCA
CGCCTTCCTCCACGGGCGGCATAGGCGACCGCAACCCTTCCCCTGCCCGT
CTCACGGGCCTGGGCCCCAGCCATGCCACGAGCCTGGTATCCCGCCCGAC
CCCGCCCCTCCCCCTCCAGCGGCCCCAATCGGTCGCCTTTGGGACGTTCC
CACGGGCTCATACACCGACACGGTCGGACCAAGGCGCGTCTGTGACGGCA
GCGTTTTCATCCTCGCTGCCCCCGCACCGGCCGCTCTCCCGCGCGGCCCC
TCCCCCCCCTCCTCCCCTTCCTCCCTCCAAGCCTCCTCCCTCGTACCCGC
ATCCTCCTCCCCCTCCTCCCCCTCCCCCTCCCCCTCCCCCTCCTCCTCCC
CCCCCTCGATACGACCCCACGGCCAGGCCCCACCCCACTCCCAGCCTCCG
TCACCTATCCTCCTCCCCCACGCAGACTTCCTACCCCTCCTCGCCCACCA
CTTGCTTCCTCCCTCGCCCTTCCCCTCCTCCGACCCCCTTCTCCGTCGCC
GCGCCCGCCCCCGGGACCCTCCACCCCCCCGCCAGCCCACTGTGGAAAAC
GGCGCCCCCCGCCTTTTCCCCGACGCCACTTTCCTCCCACGACTCCACGC
GCGCACAAGAGGCCCCACGCCCGCCTTCGGCCACCTGCTTTCTTCCTTTC
TCTACATCCTTCTCTCTTTCCGCGCCACCTACCGGCAATTCCATCCGAGG
CCTCCCATCTCCTCCTCCCTCCTTGCCTCCTCCTCCCCCCCTCCTCCCTC
TCCCCCTCCTCCTCCCTCTCGCCCCAACCCATTCAATCAAGCAAGGACTC
ACGCGACGCCAGTGCCGCAGCCTTTGGCCCCACGATCGGCCGGGGCCAGC
GCGATCAGCGAGCATCCTCCCCCCCCCCGGGCCCGCCCCCTCACGCCGCT
CGACACACCACCCAGAGACCTCCCTCTTCCCCTGCTTCGGCCATGCCGCA
ATTCTTCCACTTTCCTCCCCCTCTTTCTCCCTCGCCCGTCTCCTCCTCCC
TGTCAGCACCCCACGATCCTCTCAGCGCCCTCCTTGTCCCCCCCCCCATC
CGCCGGCCAGGCTCTCGCGCCACCCTGCCTTCCCCTTCCAGGCCCGGCCC
TGCGGAACATCAAGCCCTTGGCGGGAGCTCTAGTCGACCCCTTTCCCGCA
CCTCGCCAGCCCCTTGCCAGCCGCAACCCGCGACGAGTTTTCTCTCTGCT
TCGCTGCCCCCACCTCCCCCGTCGGCCAATCCTACGACCTGGGCTGCCAC
GACCAAGCCCTTGGCCGCCGCGCCGACAGGCACCGGTCCTCGCCACGATT
CTGTTCCGGTAGCCACGCATGTCTCGTCCTCGGATAGGCGGGGTGAGATA
GGAGGTCGCGGGCAAGTTGAGGAGGGAGCCTGGCCTTCC back to topprotein sequence of rna2187 >rna2187-protein ID=rna2187-protein|Name=rna2187|organism=Nannochloropsis gaditana|type=polypeptide|length=586bp
MSTTTPSAMDVVTKDLSSSLNVNKDNSPPGMEGSGSRALPTGTTQATNLR
ELVQEDAERFLPADVDDCSASSENNAAPVPSAVDDDDVRVAMIGNVDAGK
STLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGE
QVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDF
ALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQT
LARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLL
RAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGG
TVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFA
VRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTG
YEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGST
FLFREGRAKGIGKVSRLLYSSPGAPTASSASSTAATVSPAVQTSVAKGDG
VASTVRTSAAAGTGEVGRGAGGSGGGGGGVGVAVRA back to topmRNA from alignment at CM002458.1:1101803..1104428- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2187 ID=rna2187|Name=rna2187|organism=Nannochloropsis gaditana|type=mRNA|length=2626bp|location=Sequence derived from alignment at CM002458.1:1101803..1104428- (Nannochloropsis gaditana)
AGAGAGGTCAACTTGATTCTGTCTCGTCAGTCCGGGCCTTGCCTGACTCT
ATTACATCACTATTGAGAAATTTTCAGTCTTGTCAAGACTTTTCACCGCG
CCTTTGATTCTCCATTTCCTCACACAGCTTCTGCTATCTTTGCATCATTG
CGTGGGACAGGGGCCCGGCTAGTAGTGTCCCTGCAGGACGGGGAAGATTC
TCTCTCGCCAACATATGCCATATACCGCAAAGCAATTTACTACAATAACA
TTTGAAGAGTAATCGTAAGAAGTCTTACAACCAGTACATTTGCTTCTTTT
AAGGTAAGCGAAGAGAGCCTGTGCTCCTCTGTTATCCAATTGTTGGTTCG
AGGACCCCATACCTGATGTATGTGTGTGCTGACTCTTTTGATGTTTCGCA
ACCCCACTATCTGCACAGCGTACCTTCTCTCGGTCTGCTTACAGCATGTC
AACGACAACACCCAGTGCGATGGATGTCGTGACGAAAGATCTTTCATCGT
CTTTGAACGTGAACAAGGATAACAGCCCCCCTGGCATGGAGGGATCCGGT
TCCCGGGCCCTCCCCACGGGGACAACTCAAGCTACCAATCTAAGAGAGCT
GGTCCAAGAAGATGCCGAACGTTTCCTTCCCGCCGACGTCGACGACTGCA
GTGCGAGTAGCGAGAACAATGCGGCGCCGGTACCATCCGCAGTGGACGAC
GACGACGTGCGTGTGGCAATGATTGGAAATGTGGACGCGGGAAAGTCCAC
CCTGATCGGGGTATTGACGAATGCTATACTTGACGACGGGCGCGGGTCAG
CACGCTCCTTGGTATTAAAACACCGTCACGAGCAAGAGAATGGGCGCACG
TCTGCTGTCACGATTGAACTATTGGGGTACAAGGGTACGGGCGAACAGGT
GTTGCCCCAAGGCAGGAACCAGACACACCGATGGCAGGAAATCGTCCGCT
CCTCCGGCCGCACCGTCACCCTCATCGATTTGTGCGGTCACGAGCGGTAC
TTGAAGACTACCATCTTCGGACTCACGGGCCTGCTGCCTGACTTTGCCTT
GCTCTTGGTGGGAAGCAACATGGGCGTGACGGTCATGACGCGCGAGCACA
TCGCGATCGCCTGCGCCCTTTCGATTCCTTTGGCCGTGGTCCTGACGAAG
ATCGACATCGCGCCCGAGCCGGTGCTGAAGCAGACGCGCCAGACCCTGGC
TCGCTACCTGAGAAAGAACAACAAGCTTCCTTACCCCATTAAGGACATGA
CACAGGTGGAGGCCGCTGCCGACTCGTTGGCTTCGGATAGGGTCACGCCC
GTCTTCGCCATCTCCAGCGTGACGGGCCAGGGGATGGACCTGCTTCGCGC
CTTTGTCTCGCGTCTGCGTCGCACCCCTCGCCTCTACCAGGGTCTGACCA
CCTCCCCCTGCCCGGGGGGGTCCGAAGCCCCTAGCATCCATATCCCCGTA
GACGGTGTCTATGAGGTCAAGGGCGTGGGCTTGGTCGTGGGCGGCACGGT
CCTCCGCGGCCACGTCGTCCCCAACCAAAGCCTCCTCCTGGGGCCCGACC
GGAACGGCGCCTTCTTGCCCTTGTCGGTACGGAGCATCGAGTGCCGCCGA
CAACCGGTCAAGGAGGCTAAGGTGGGCATGAGTATTACATTTGCCGTCCG
CTCCCTGAACAAGAAAGTCACCCTCCGGCGCTCCTATTTCAGAAAAGGAA
TGGTGCTGGTGGGGGCGGAGGACAGGCCCCGGCCGGTGCGTGATTTTGTC
GCCTCTGTGGTCATTCTCCACCATTCCACTACCATGAGCACGGGTTACGA
GCCTGTGCTGCACATGGGCACCGTCCGGCAGGCGGCGGAGATGACGCAGA
TCTTGGGGGGGGAAGAGGCGCTGAGGACGGGTTCGCGGGCGGAGGTGTTG
TTCCATTTTCGATACTTTGCGGAGTTTTTGGTGGTGGGCTCCACGTTTTT
GTTCCGGGAGGGGCGGGCTAAAGGGATTGGAAAGGTTTCGAGATTGCTCT
ACTCCTCACCAGGCGCGCCTACAGCGTCTTCAGCCTCCTCGACGGCGGCA
ACCGTCAGCCCAGCAGTGCAGACTTCCGTTGCCAAGGGAGATGGTGTCGC
CAGCACGGTAAGGACGTCGGCTGCAGCGGGAACAGGAGAGGTAGGCAGGG
GCGCGGGGGGTTCAGGAGGCGGTGGAGGAGGGGTGGGTGTGGCCGTGCGC
GCGTGATTGTCGAGGAATGCACTCTGGAAGGGCAAAGGGTAGGATGAATA
AGGAGGCAAGGGTCTGCATGCTTTGCAGGACGTGTGCGTGGAGGAGGGGG
GTGAGGGAGAGGTGAGGGAGCGAAGGTTGGTGTGTACATGGCATGTCGTG
GGGATGGAGAGGGGTTTAACAGGGAATGCTCTCGCCGGGGGGGAAGGGAG
ACAAGGACGCGCGGTGAGAATGCGGGGGGCCTGCACGGTCAATCACACGT
GTGGTAGACGAAGACGAAGACAATAAAAATGTTCCCCCGAGAGAGGGGAG
GCTCGACGTGTCAGTGCTGGATACAGACACTGGTGAAACTGAAAGCAAAC
GAAAAGGGGAACATTAAATGTGCCTGCAAATGCTCGAGAAGAAGAATACG
TACGAGGGAAAACGCCTGACATTGCT back to topCoding sequence (CDS) from alignment at CM002458.1:1101803..1104428- >rna2187 ID=rna2187|Name=rna2187|organism=Nannochloropsis gaditana|type=CDS|length=1761bp|location=Sequence derived from alignment at CM002458.1:1101803..1104428- (Nannochloropsis gaditana)
ATGTCAACGACAACACCCAGTGCGATGGATGTCGTGACGAAAGATCTTTC
ATCGTCTTTGAACGTGAACAAGGATAACAGCCCCCCTGGCATGGAGGGAT
CCGGTTCCCGGGCCCTCCCCACGGGGACAACTCAAGCTACCAATCTAAGA
GAGCTGGTCCAAGAAGATGCCGAACGTTTCCTTCCCGCCGACGTCGACGA
CTGCAGTGCGAGTAGCGAGAACAATGCGGCGCCGGTACCATCCGCAGTGG
ACGACGACGACGTGCGTGTGGCAATGATTGGAAATGTGGACGCGGGAAAG
TCCACCCTGATCGGGGTATTGACGAATGCTATACTTGACGACGGGCGCGG
GTCAGCACGCTCCTTGGTATTAAAACACCGTCACGAGCAAGAGAATGGGC
GCACGTCTGCTGTCACGATTGAACTATTGGGGTACAAGGGTACGGGCGAA
CAGGTGTTGCCCCAAGGCAGGAACCAGACACACCGATGGCAGGAAATCGT
CCGCTCCTCCGGCCGCACCGTCACCCTCATCGATTTGTGCGGTCACGAGC
GGTACTTGAAGACTACCATCTTCGGACTCACGGGCCTGCTGCCTGACTTT
GCCTTGCTCTTGGTGGGAAGCAACATGGGCGTGACGGTCATGACGCGCGA
GCACATCGCGATCGCCTGCGCCCTTTCGATTCCTTTGGCCGTGGTCCTGA
CGAAGATCGACATCGCGCCCGAGCCGGTGCTGAAGCAGACGCGCCAGACC
CTGGCTCGCTACCTGAGAAAGAACAACAAGCTTCCTTACCCCATTAAGGA
CATGACACAGGTGGAGGCCGCTGCCGACTCGTTGGCTTCGGATAGGGTCA
CGCCCGTCTTCGCCATCTCCAGCGTGACGGGCCAGGGGATGGACCTGCTT
CGCGCCTTTGTCTCGCGTCTGCGTCGCACCCCTCGCCTCTACCAGGGTCT
GACCACCTCCCCCTGCCCGGGGGGGTCCGAAGCCCCTAGCATCCATATCC
CCGTAGACGGTGTCTATGAGGTCAAGGGCGTGGGCTTGGTCGTGGGCGGC
ACGGTCCTCCGCGGCCACGTCGTCCCCAACCAAAGCCTCCTCCTGGGGCC
CGACCGGAACGGCGCCTTCTTGCCCTTGTCGGTACGGAGCATCGAGTGCC
GCCGACAACCGGTCAAGGAGGCTAAGGTGGGCATGAGTATTACATTTGCC
GTCCGCTCCCTGAACAAGAAAGTCACCCTCCGGCGCTCCTATTTCAGAAA
AGGAATGGTGCTGGTGGGGGCGGAGGACAGGCCCCGGCCGGTGCGTGATT
TTGTCGCCTCTGTGGTCATTCTCCACCATTCCACTACCATGAGCACGGGT
TACGAGCCTGTGCTGCACATGGGCACCGTCCGGCAGGCGGCGGAGATGAC
GCAGATCTTGGGGGGGGAAGAGGCGCTGAGGACGGGTTCGCGGGCGGAGG
TGTTGTTCCATTTTCGATACTTTGCGGAGTTTTTGGTGGTGGGCTCCACG
TTTTTGTTCCGGGAGGGGCGGGCTAAAGGGATTGGAAAGGTTTCGAGATT
GCTCTACTCCTCACCAGGCGCGCCTACAGCGTCTTCAGCCTCCTCGACGG
CGGCAACCGTCAGCCCAGCAGTGCAGACTTCCGTTGCCAAGGGAGATGGT
GTCGCCAGCACGGTAAGGACGTCGGCTGCAGCGGGAACAGGAGAGGTAGG
CAGGGGCGCGGGGGGTTCAGGAGGCGGTGGAGGAGGGGTGGGTGTGGCCG
TGCGCGCGTGA back to top
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