EWM28498.1, cds2179 (CDS) Nannochloropsis gaditana

Overview
NameEWM28498.1
Unique Namecds2179
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1102223..1103983 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28498.1
Productgtp-binding protein 1
Orig transcript idgnl|cribi|Naga_100058g14.4265.mrna
GeneGTPBP1
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1102223..1103983 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0000166nucleotide binding
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR009000Transl_B-barrel
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR000795TF_GTP-bd_dom
IPR027417P-loop_NTPase
IPR004160Transl_elong_EFTu/EF1A_C
Homology
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|585110914|gb|EWM28498.1| (gtp-binding protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 1181.78 bits (3056), Expect = 0.000e+0
Identity = 586/586 (100.00%), Postives = 586/586 (100.00%), Query Frame = 0
Query:    1 MSTTTPSAMDVVTKDLSSSLNVNKDNSPPGMEGSGSRALPTGTTQATNLRELVQEDAERFLPADVDDCSASSENNAAPVPSAVDDDDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLLYSSPGAPTASSASSTAATVSPAVQTSVAKGDGVASTVRTSAAAGTGEVGRGAGGSGGGGGGVGVAVRA 586
            MSTTTPSAMDVVTKDLSSSLNVNKDNSPPGMEGSGSRALPTGTTQATNLRELVQEDAERFLPADVDDCSASSENNAAPVPSAVDDDDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLLYSSPGAPTASSASSTAATVSPAVQTSVAKGDGVASTVRTSAAAGTGEVGRGAGGSGGGGGGVGVAVRA
Sbjct:    1 MSTTTPSAMDVVTKDLSSSLNVNKDNSPPGMEGSGSRALPTGTTQATNLRELVQEDAERFLPADVDDCSASSENNAAPVPSAVDDDDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLLYSSPGAPTASSASSTAATVSPAVQTSVAKGDGVASTVRTSAAAGTGEVGRGAGGSGGGGGGVGVAVRA 586          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|298705625|emb|CBJ28876.1| (GTPBP1, EF1alpha-like GTPase [Ectocarpus siliculosus])

HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0
Identity = 285/435 (65.52%), Postives = 356/435 (81.84%), Query Frame = 0
Query:   87 DVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGE---EALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLL 518
            D+R+AMIGNVD+GKSTLIGVL+++ LDDGRG+ARSLVL+HRHEQENGRTSAVT+E++GY   G+QV+P  R+   RW E+V  S R+VTLIDLCGHE+YLKTT+FGLTGL+PDF LL+VG+NMGV  MT+EHI+IACAL IP+AVV+TK+DI P  VLKQTRQ LA+YLR+N K+PYPIKD+ QV+AAA+S+ASDR+TPVFA+S+VTG G+ LLRAFV+RLRR  +      T P    S+ P++H P+DGVYEV+GVG+VVGGT+LRG V  NQ+LL+GPDR G F+ ++VRSIEC+RQ VKEA  G S TFAVRSLN++V LRRS FRKGMV +  +D PR  R+F A VVILHHSTT++ GY+PV+H G VRQAA +  + G E   EALRTG  A V F F Y++E++V+GSTFLFREGRAKGIGK+ R++
Sbjct:  106 DIRIAMIGNVDSGKSTLIGVLSSSGLDDGRGAARSLVLRHRHEQENGRTSAVTMEIMGYAKDGKQVVPTARSHLQRWAEVVNHSDRSVTLIDLCGHEKYLKTTVFGLTGLMPDFCLLVVGANMGVQRMTKEHISIACALQIPIAVVVTKVDICPPTVLKQTRQALAKYLRQNQKMPYPIKDVNQVDAAAESIASDRITPVFAVSNVTGMGLPLLRAFVARLRRN-KSRNDDPTMPIR-ESDLPAVHFPIDGVYEVRGVGIVVGGTMLRGSVTVNQTLLIGPDRAGDFIQVTVRSIECKRQSVKEANEGQSATFAVRSLNRRVALRRSTFRKGMVAIDGQDDPRATREFEADVVILHHSTTVAPGYQPVIHCGVVRQAAAILSMSGTESGMEALRTGQTATVRFRFMYYSEYMVLGSTFLFREGRAKGIGKIRRVI 538          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|676385383|ref|XP_009035970.1| (hypothetical protein AURANDRAFT_1185, partial [Aureococcus anophagefferens] >gi|323453095|gb|EGB08967.1| hypothetical protein AURANDRAFT_1185, partial [Aureococcus anophagefferens])

HSP 1 Score: 526.939 bits (1356), Expect = 0.000e+0
Identity = 260/432 (60.19%), Postives = 324/432 (75.00%), Query Frame = 0
Query:   84 DDDDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKV-TLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKV 514
            D  DVRVAMIGNVD+GKSTLIGVLT   LDDGRG ARSLVL+H+HEQENGRTS V++EL+G++G   QVLP  R    RW+E+V +  R V+LIDLCGHERYLKTT+FGLT +LPDFALL+VG+NMGV  MTREHI+IA ALS+P+AVV+TK+DI P  VLKQTRQTLAR LR + ++P P+K+  Q+  AA+S  + RV PVFA+SSV G G+DLL+ F+  L R PR        P P        H+ +DGVYEV+GVGL+VGGT+ RG +    +L LGPDR GAF+ +SV+SIEC+RQP+   K G++ T A+R+L++K   LRR+Y+RKGMVL+GA D PR  R F A VVILHHSTT+  GY+PV+H G VRQA  +  I   E  LRTG++A V F F Y  E+L+VG+TFLFREGRAKGIGK+
Sbjct:    1 DARDVRVAMIGNVDSGKSTLIGVLTAGGLDDGRGGARSLVLRHKHEQENGRTSTVSVELMGFQGE-RQVLPTARQHAQRWKEVVDACDRNVSLIDLCGHERYLKTTVFGLTAMLPDFALLVVGANMGVQRMTREHISIAVALSLPIAVVVTKVDICPPDVLKQTRQTLARCLRHHGRMPMPVKERDQLANAAESAGAGRVAPVFAVSSVKGDGLDLLKGFLGLLERAPR--------PIP-------THLCIDGVYEVRGVGLIVGGTLTRGAIAVGDALWLGPDRAGAFVSVSVKSIECKRQPIDAIKPGVNATLALRALHRKAPPLRRAYYRKGMVLLGASDAPRASRRFSADVVILHHSTTVQEGYQPVVHCGVVRQACALLNICNKENLLRTGAKARVTFRFMYHTEYLLVGATFLFREGRAKGIGKI 416          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|873228438|emb|CEM15849.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 429.869 bits (1104), Expect = 4.420e-141
Identity = 220/455 (48.35%), Postives = 307/455 (67.47%), Query Frame = 0
Query:   83 VDDDDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLP--------QGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKN--NKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQ-GLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLLYSSPGAPT 526
            VD +DV++AMIGNVD+GKSTL+GVLT  +LDDGRG+ARS V  + HE +NGRTS++  E++G+   G+QV+P        Q RN T  W  IV +S + VT +DLCGHE+YLKTTIFGL G  PD+A++++G+NMG+  MTREH+ IA AL +P+ +V+TKIDIAPE   K++ Q L + L+ +   KLP  I++   + AAA S+ASDRV P+F +S+VTG+G++ LR F+ R+    R+   GL   P    S+    HI  DGVY+V GVG+VV GT+  G ++ N  +LLGPD+ G F P+ VRSI  +R PV +   G + +FA+RSL KK  L+R++FRKGMVL+     P+   +F A VVILHH+TT+   Y+ V+H G +RQ+A++  + G  + LRTG R  + F F Y AE+L +    LFREGR KG+G++ R LY S G  +
Sbjct:  122 VDSEDVKIAMIGNVDSGKSTLVGVLTKRVLDDGRGAARSRVFNYAHELQNGRTSSIAQEIMGFTTDGKQVVPEQARQNSAQSRNAT--WSHIVNNSSKIVTFLDLCGHEKYLKTTIFGLVGCCPDYAMIVIGANMGIQRMTREHLGIALALRVPVFIVITKIDIAPENKYKESMQQLCKLLKSSAAKKLPLVIREADDIVAAASSIASDRVCPIFTVSNVTGEGLEFLRDFMVRI--VNRVEDCGLYRPP----SDPAEFHI--DGVYQVTGVGIVVAGTMKSGTIMQNSQVLLGPDKTGNFRPVLVRSIHSKRIPVSKVVSGQAASFALRSLVKKEQLKRNHFRKGMVLLDRSTVPKATWEFEAEVVILHHATTIKERYQAVIHCGVIRQSAQVISLTG--DLLRTGDRGSIRFRFMYHAEYLALDLPLLFREGRTKGLGRICR-LYDSKGGES 563          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|678342227|emb|CDW73046.1| (gtp-binding protein 1-like [Stylonychia lemnae])

HSP 1 Score: 423.705 bits (1088), Expect = 9.514e-139
Identity = 212/471 (45.01%), Postives = 313/471 (66.45%), Query Frame = 0
Query:   55 EDAERFLPADVDDCSASSENNAAPVPSAV---DDDDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQT--HRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRK--NNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLN-KKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRL 517
            E+ ++  P + D      E+    + S++   +++D+R+A+IGNVD+GKSTL+GVLT  I+DDGRGSAR  V    HE +NGRTS++  E++G+  T +QV  +  N T    W  I  +S + +T +DLCGHE+YLKTT+FGL GLLPD+++++VG+NMGV+ MT+EH+ I+ AL +P+ +V+TK+DIAP+ V +QT+ TL + L+     K+P  +K+   V   A+SLASD+VTP+F IS+VTGQG+  L+ F+S L    ++         P       +   +DGVY+V GVGLVV GT+  G V+PN +LLLGPD+ G F P+ V+SI  +R PV  A  G ++ F ++ L+ KK+ L+R++FRKGMVL+     P  + DF A VVILHH+TT+ T Y+ V+H G +RQAA++  +   ++ LRTG +  V F F Y  E+L  G+T LFREGR KG+G V+++
Sbjct:   77 EEEKKLTPEEEDAEKQGFESQLDKLDSSLAVREENDIRIAVIGNVDSGKSTLVGVLTKGIMDDGRGSARMKVFNFGHEAQNGRTSSIGQEIMGFDDTKKQVEVERANATKNQSWAHIASNSKKLITFLDLCGHEKYLKTTMFGLVGLLPDYSMIIVGANMGVSRMTKEHLGISLALKVPIFIVITKVDIAPQNVYEQTKDTLVKILKSPGCGKMPVVVKEDDDVSVFANSLASDKVTPIFTISNVTGQGLPKLKEFMSLLHSRIQISGHFRKPTDP-------VEFMIDGVYQVTGVGLVVAGTLKAGTVLPNTTLLLGPDKTGKFNPVVVKSIHHKRTPVDNAVSGQAVCFNIKPLDSKKLQLKRTHFRKGMVLLDKNSNPSSIYDFEAEVVILHHATTIKTNYQAVIHCGVIRQAAKVCDM--NKDLLRTGDKGHVKFKFMYRPEYLKPGTTILFREGRTKGLGVVTQV 538          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|403360450|gb|EJY79902.1| (GTP-binding protein 1 (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 414.461 bits (1064), Expect = 5.779e-135
Identity = 205/442 (46.38%), Postives = 304/442 (68.78%), Query Frame = 0
Query:   84 DDDDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQT--HRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRK--NNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPS--IHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLN-KKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLL 518
            +++D+R+A+IGNVD+GKSTL+GVLT  I+DDGRGSAR  V    HE +NGRTS++  E++G+  T  QV  +  N T    W  I  +S + +T +DLCGHE+YLKTT+FGL GLLPD+++++VG+NMGV+ MT+EH+ I+ AL +P+ +V+TKIDIAP+ V +QT+ TL + L+     K+P  +KD   +   A+SLA+D++TP+F IS+VTG+G+  L+ F+S L+   R++         G  + P+  +   +DGVY+V GVGLVV GT+  G V+P   LLLGPD+ G F P+ V+SI  +R PV  A  G ++ F +++ + KK+ L+R++FRKGMVL+     P+ + DF A VVILHH+TT+ T Y+ V+H G +RQAA++  +   ++ LRTG +  V F F Y  E+L  G+T LFREGR KG+G V++++
Sbjct:  120 EENDIRIAVIGNVDSGKSTLVGVLTKGIMDDGRGSARMKVFNFGHEAQNGRTSSIGQEIMGFDDTKRQVEVERANATKNQSWAHIATNSKKLITFLDLCGHEKYLKTTMFGLVGLLPDYSMIIVGANMGVSRMTKEHLGISLALKVPIFIVITKIDIAPQSVYEQTKDTLVKILKSPGCGKMPVLVKDDDDISVFANSLAADKLTPIFTISNVTGEGVPKLKEFMSLLQ--SRIHMS-------GHFKKPTDPVEFMIDGVYQVTGVGLVVAGTLKAGSVLPGTVLLLGPDKTGKFNPVVVKSIHHKRTPVDVAVSGQAVCFNIKAQDSKKLQLKRTHFRKGMVLLDKNSNPQSIYDFEAEVVILHHATTIKTNYQAVVHCGVIRQAAKVLDM--NKDLLRTGDKGHVKFKFMYRPEYLKPGTTILFREGRTKGLGVVTQVI 550          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|1134876683|gb|OMJ74566.1| (hypothetical protein SteCoe_26465 [Stentor coeruleus])

HSP 1 Score: 384.03 bits (985), Expect = 5.289e-125
Identity = 192/440 (43.64%), Postives = 287/440 (65.23%), Query Frame = 0
Query:   86 DDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLP----QGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRK---NNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLL 518
            DD+R+A+IGNVD+GKSTL+GVLT  + DDGRG ARSLV  + HEQ NGRTS++  E++G+   G QV+P    + +N+T  WQ IV  S   +T +DLCGHE+YLKTTIFGL GL+PD+A++++G+NMG+T MT+EHI +A +L +P+  ++TKIDIAP+ V   T + L + +R     +++P        VE +  SL   +  P+F +S+VTG+G+ +L++F++ L+        + +S   G  EAP+    +DGV+ V GVGLVV G +  G     Q L LGPD  G F P+ V+ I  +R P+ +A  GMS++  ++++ KK  L++S ++KGMVL+  +  P  V +F A VVILHH+TT+   Y+P++H G VRQAA + ++    E LR+G +  + F F Y  E +  G   LFREGR KG+G+V +++
Sbjct:    8 DDIRIAVIGNVDSGKSTLVGVLTKCVQDDGRGHARSLVFNYAHEQANGRTSSIAQEIMGFNDQGMQVIPDRITESKNKT--WQPIVEKSKHLITFLDLCGHEKYLKTTIFGLVGLMPDYAMIVIGANMGITRMTKEHIGLAISLKVPIFFIITKIDIAPKNVFDSTLEMLQKIMRSPAAGSRMPMVATQENIVELS--SLIESKCCPIFIVSNVTGEGIPVLKSFLNTLKTR------VNSSGMFGPPEAPT-EFLIDGVFMVTGVGLVVSGILRAGTTTVGQMLNLGPDSTGNFKPVQVKGIHHKRVPIDKATSGMSVSLNIKAIAKKDVLKKSSYKKGMVLIDKDLCPETVWEFEAEVVILHHATTIRQNYQPIIHCGVVRQAANVIEM--SNELLRSGDKGTIKFRFAYRPEIMHTGMHILFREGRTKGLGEVRKII 434          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|1134897812|gb|OMJ94972.1| (hypothetical protein SteCoe_1839 [Stentor coeruleus])

HSP 1 Score: 381.719 bits (979), Expect = 8.422e-124
Identity = 200/435 (45.98%), Postives = 278/435 (63.91%), Query Frame = 0
Query:   87 DVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQ--GRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRK--NNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRLRRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEALRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRL 517
            DVRVA+IGNVD+GKSTL+GVLT  I DDGRGSARSLV  + HEQ NGRTS+++ E++G+ G G+Q+ P+    ++ + W+ +V  S R VT +DLCGHE+YLKTTIFGL GLLPD+ ++++G+NMG+T M +EHI ++ AL IP+  V TKID+APE + K     L R L      ++  P+ + T V + A  + S +  P+F +S+VTGQG+D LRAF+S L+   +       S   G    P+  + +DG+Y V GVGLVV G +  G V  N +L LGPD  G +  +SV+SI   R  V +A  G S+ F +R  NKK  L+RS+ +KGMVLV          +F A VVILHH+TT+   Y+P++H G VRQAA +  +   +E LR G +  + F F Y  E +  G   LFREGR KG+G +S++
Sbjct:   26 DVRVAVIGNVDSGKSTLVGVLTRCIKDDGRGSARSLVFNYSHEQANGRTSSISHEIMGFTGHGQQIAPERVTDSKKNTWEYVVSRSSRVVTFLDLCGHEKYLKTTIFGLVGLLPDYTMIVIGANMGITRMAKEHIGLSLALKIPMFFVFTKIDMAPENIYKDNINLLKRILASPAAGRIAMPVDEDTDVISLAGMMES-KGCPIFTVSNVTGQGLDKLRAFISSLQTRTQ------NSSIFGTINQPA-EMLIDGIYMVTGVGLVVSGILKSGTVSVNDTLYLGPDSTGGYKQVSVKSIHKLRISVDKAIAGQSVCFGIRIHNKKEQLKRSFIKKGMVLVSKSLCAETSWEFDAEVVILHHATTIKEKYQPIIHAGVVRQAASVINMT--KELLRPGDQGLIHFRFTYHPELIHPGMNILFREGRTKGLGVISQI 450          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|923126823|ref|XP_013756878.1| (GTP-binding protein 1 [Thecamonas trahens ATCC 50062] >gi|906557089|gb|KNC50332.1| GTP-binding protein 1 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 386.341 bits (991), Expect = 1.749e-122
Identity = 206/457 (45.08%), Postives = 293/457 (64.11%), Query Frame = 0
Query:   79 VPSAVDDDDVRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRK--NNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAFVSRL-RRTPRLYQGLTTSPCPGGSEAPSIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVGAEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEA------------------LRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKV 514
            +PSA +  ++RVA++GNVD+GKSTL+GVLT   LDDGRG+ARS V +H HE E+GRTS+++ E+LGY   G +++     +T  W  I  +S + +T +DL GHERYLKTT+FGLTG+ P +A+++VG+N GV  MT+EH++IA AL +P+ +V+TKID+AP  VLK+T + L++ ++     K+P  +K M  V  AA S    R+ P+F +S+VTG+ +DLLRAF++ L  RT   +  LT +P           + +D  + V GVG VV GTVL G V    SLLLGP+  GAF P++++SIE RR P K    G S +FA++       ++RS  RKGM L+ AE  P+ V  F A ++IL+HSTT+S  YE V+H G VRQ A++  I+   +A                  LRTG RA+V+F F Y  E+L VGS  +FR+GR KG+G+V
Sbjct:  190 LPSAAEFCEIRVAVVGNVDSGKSTLLGVLTRGKLDDGRGAARSCVFRHSHEIESGRTSSISQEILGYDA-GAEIVNYTFERTPSWSAICVASSKVITFLDLAGHERYLKTTLFGLTGMNPSYAMMMVGANAGVIGMTKEHMSIALALKVPVYMVVTKIDMAPPNVLKRTLRQLSKLVKSPGARKVPIVVKTMDDVVVAARSFLMHRICPIFLVSNVTGENLDLLRAFINLLPARTE--WSQLTEAPA---------EVCIDDTFSVPGVGCVVSGTVLSGGVTAGDSLLLGPNAFGAFEPVTIKSIEVRRHPTKAVTAGRSASFALKK------IKRSAIRKGMRLLAAELEPQAVWQFEAEILILYHSTTISRAYEAVVHCGNVRQVAKIIDIVSACDATGAPLADADMPSDARDLVLRTGMRAKVIFRFLYAPEYLPVGSRLIFRDGRTKGVGRV 628          
BLAST of EWM28498.1 vs. NCBI_GenBank
Match: gi|673053229|ref|XP_008880575.1| (hypothetical protein H310_14482 [Aphanomyces invadans] >gi|574463758|gb|ETV90818.1| hypothetical protein H310_14482 [Aphanomyces invadans])

HSP 1 Score: 379.407 bits (973), Expect = 3.043e-122
Identity = 195/456 (42.76%), Postives = 286/456 (62.72%), Query Frame = 0
Query:   88 VRVAMIGNVDAGKSTLIGVLTNAILDDGRGSARSLVLKHRHEQENGRTSAVTIELLGYKGTGEQVLPQGRNQTHRWQEIVRSSGRTVTLIDLCGHERYLKTTIFGLTGLLPDFALLLVGSNMGVTVMTREHIAIACALSIPLAVVLTKIDIAPEPVLKQTRQTLARYLRKNNKLPYPIKDMTQVEAAADSLASDRVTPVFAISSVTGQGMDLLRAF-----VSRLRRTPRLYQ---------GLTTSPCPGGSEAP----SIHIPVDGVYEVKGVGLVVGGTVLRGHVVPNQSLLLGPDRNGAFLPLSVRSIECRRQPVKEAKVGMSITFAVRSLNKKVTLRRSYFRKGMVLVG--AEDRPRPVRDFVASVVILHHSTTMSTGYEPVLHMGTVRQAAEMTQILGGEEA-----LRTGSRAEVLFHFRYFAEFLVVGSTFLFREGRAKGIGKVSRLL 518
            +R+A +GNVD+GKS+LIG      LDDGRG +R  + +H+HE ++GRTS++    +G+   GEQ++ +   +   W E+ + S + + LIDL GHERYLKTT++GLTG+ PD  +++VG+NMGV  MT EH+ I  +L IP+ + LTKIDIAP+ V + T QT+ + LR+  K+   +K + +   AA  L S+R+TP+  +S+VTG G+  LR       V  L R+ + +          G   +P  G  + P    S+ +P+D  Y+V G G V+ GT++ G +  N ++ +GPD NG F  + VRSIE    P+KE   G +    +RSLNKK  L R+ FRKGMVLV   A+D+P   R F A V+ILHH TT++ GY+P+++  T+RQ A +T ILG + +     +RTG RA + F F +FAEFL  G  F+FR+G+AKGIG+V R+L
Sbjct:   36 LRIAFVGNVDSGKSSLIGTQIRGELDDGRGLSRQAIFRHKHELDSGRTSSIATAYMGFDAQGEQIVAKRSGKILPWSELAKHSHKKIQLIDLAGHERYLKTTVYGLTGMQPDIVVVVVGANMGVKKMTLEHLGITMSLEIPVVIALTKIDIAPKSVARDTLQTIRKCLRQYGKMGMLVKSLDEAVNAAKGLPSNRLTPILPLSNVTGDGLANLRHLLQCVDVDALVRSAQSFTSHDESSDEVGAFATPIAGPEKQPDHGLSVEMPIDDTYQVPGAGFVIAGTIVSGTIKTNDTVKIGPDHNGHFHKVVVRSIESMYMPLKEVVAGQTTALGIRSLNKKQVLNRANFRKGMVLVNVTADDKPFVSRRFEAKVMILHHQTTITVGYQPMINCRTIRQTAAITAILGTDASIEQRTIRTGDRAVIQFTFLHFAEFLKPGMRFVFRDGQAKGIGQVVRVL 491          
The following BLAST results are available for this feature:
BLAST of EWM28498.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110914|gb|EWM28498.1|0.000e+0100.00gtp-binding protein 1 [Nannochloropsis gaditana][more]
gi|298705625|emb|CBJ28876.1|0.000e+065.52GTPBP1, EF1alpha-like GTPase [Ectocarpus siliculos... [more]
gi|676385383|ref|XP_009035970.1|0.000e+060.19hypothetical protein AURANDRAFT_1185, partial [Aur... [more]
gi|873228438|emb|CEM15849.1|4.420e-14148.35unnamed protein product [Vitrella brassicaformis C... [more]
gi|678342227|emb|CDW73046.1|9.514e-13945.01gtp-binding protein 1-like [Stylonychia lemnae][more]
gi|403360450|gb|EJY79902.1|5.779e-13546.38GTP-binding protein 1 (macronuclear) [Oxytricha tr... [more]
gi|1134876683|gb|OMJ74566.1|5.289e-12543.64hypothetical protein SteCoe_26465 [Stentor coerule... [more]
gi|1134897812|gb|OMJ94972.1|8.422e-12445.98hypothetical protein SteCoe_1839 [Stentor coeruleu... [more]
gi|923126823|ref|XP_013756878.1|1.749e-12245.08GTP-binding protein 1 [Thecamonas trahens ATCC 500... [more]
gi|673053229|ref|XP_008880575.1|3.043e-12242.76hypothetical protein H310_14482 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2187rna2187Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications