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Properties
| Property Name | Value |
|---|
| Product | transmembrane protein |
| Orig transcript id | gnl|cribi|Naga_100058g12.4251.mrna |
| Orig protein id | gnl|cribi|Naga_100058g12.4251 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1094936..1097385 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2185 ID=rna2185|Name=rna2185|organism=Nannochloropsis gaditana|type=mRNA|length=777bp
ATGCTGCGAAGATCAGCGTCTCGAGATTTCCCCAATTTGAATAAGCGAAG
AGACGTCAGTGTCTGCCTTCCGATGGCACGCAATCTATCGCTCAAGAATC
GAGCAACGCTTCAACCTTTTGGGGGCAAAGGACGCCCGTTCATGGTAAAA
CTCCGTTCAGGCGCTTATCACACCGAAAAGGGTTCCATCCAAGCTCTCTT
GCAAGAAGTGGACGCTCTCGTGCCATGTTTAGCGGTCCGACCGTCCTCCA
TCCATGGAGCCGGGGACGGTCTGTGGACATCCGTAGACCTCCCCGCGCAA
AAACCACTTGTCTTGTACTACGGCGATTTACGACGCGAGAAGGCACAGGG
TCGGTATTGTATTCAGGTTGGCCCCAAACTGACGCTTGATGCCGAGGCTG
TACATTCCTTTGTATGTGACAACGCCGACGCGACAGTTGATGTAGAAAAC
GGACACTTGCGTTATGGAAGCATGCTGAATTTAGGTCGGTACGTGAATGA
CGCGAAGGGACAACCGGACATGCAGAACAATTTAAGATACGGCCGACTTT
TGAGGTTCGATGAATTCGATGAGGACGTTGCCGGGGCACCAAAAAAGAGG
GAAAGCAGGCCTCCCTGTGTGGTCATGTATAGCACGCGGAAGATCCGAGC
CGGGGAGGAGTTGCTCGCGTCGTATGGGACTGTTTACTGGGCGCGCTGGG
GAAGCTTGCTTGCGGAACCTTCGAATTTCAGCCCTGACATCTGCAACTTG
TCGGAAAAGAAGAAAGTATGCGTATGA back to topprotein sequence of rna2185 >rna2185-protein ID=rna2185-protein|Name=rna2185|organism=Nannochloropsis gaditana|type=polypeptide|length=709bp
MPSPTKQGETDRSPATEAEPLLSRVDSIESWGLSNPGDAIPTTRHQPMRH
QLSDPITGPSKGWRDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEA
DMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVS
CVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIAT
GVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVI
FWIHIFTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFAT
AIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTIS
FLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMG
GGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNP
WRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTM
LLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVA
AAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFF
CKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDT
MYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDK
LGGVRVITH back to topmRNA from alignment at CM002458.1:1094936..1097385- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2185 ID=rna2185|Name=rna2185|organism=Nannochloropsis gaditana|type=mRNA|length=2450bp|location=Sequence derived from alignment at CM002458.1:1094936..1097385- (Nannochloropsis gaditana)
ATGCCATCGCCTACAAAACAAGGAGAGACAGACCGGTCCCCAGCTACCGA
GGCCGAGCCATTGCTTTCTCGCGTGGACAGCATCGAATCCTGGGGTCTAT
CCAACCCTGGTGACGCCATCCCCACTACGCGCCACCAACCTATGCGCCAT
CAGCTTTCAGACCCGATCACTGGGCCAAGCAAAGGATGGCGCGATCGCCT
CTCCAATAAAAGTAACATTGAGACGTGGACTTTTCCTGGATGGGGCCGGT
ACAATTTACAAATGACTGTGACGGACGAGGAGCTTGCGGAGATCGAGGCT
GATATGGACCAACAGCAGCCTCCGAAACTGAATCAATGGGAGGCAACAGC
CATCTGCGGAAACGACATCATGGCCAGCTGCTTTTACGTGGTAGGCCTTG
TGACTATGTCCGCAGGCAAGATGGCGCCGCTCGCCTTGCTCTTGGTATCC
TGCGTCTTGTATTTAATCAGGTAAAAAGCCGGGGGGCATGTGTGTATGGA
CGACGCATTCGTGTATCAACGCCCAAGAAAGGGTCTTTGATTGATTGAAA
CGAGGCGGCAGCGGCTCATGAAAGCTCGTGGTTAATTCTGTACCATCCCT
TTCTTCACGCCAGGTTTCTGTACGCTGAGGCCATCACCGCCCTTCCCATG
AACGGCGGTTCTTTTAACGTGCTTTTGAACAGCACCAGCAAAGGCATTGC
ATCCTCCGCCGCTACACTGGCTCTAGTGTCCTACATTGCCACGGGGGTAG
TCTCGGCCACGAGCGCTGTCGATTACCTGAAGAAGGTAGTGTCGGTGCCG
AACCCCTTACTTGCCATCCTGGGTCTGCTCTTCCTATTTGCCGTCCTGGT
TTTCCTCGGGATAAAGGAGAGCGCAGGCGTCGCCCAAGTCATATTCTGGA
TTCACATATTCACCTTGACTTTGCTTTGTGCCTGCTCTATGGTCTACGTG
GTTGCGGACCCTTCCACTCTTCGCGAAAATTTCCGGGCACCCTACCCGGA
TGTTGAACTTGGTGGAGTGATCCGCTCGGGATCCTTTGCGACGGCGATTT
TTTTCGGCTACACCTCCGCAATTTTGGGCGTGAGTGGCTTCGAGAGCAGC
TCCCAGTTCGTTCAGTCCCAGGCCCCGGGCGTTTTCCTCAAGACTCTCCG
AAACATGTGGGTGGGCGCATTCGTATTCAACCCGACGATTTCCTTCCTCT
CCCTCGGGGTCTTGCCCCTGGCTCGGATCGTGGAGGACGAGTCCGTGGTG
CTGGCGAAAATGGCCAAGCATGTGGGAGATTGGATGTGCGGGGGGGCTGG
GGCGGGCGTGGAGGCAAGCCGAAGGCTCGGGGCCGGCATGGGGGGGGGCC
GGTGGCTGGAAATTTGGGTCAGTTTGGATGCCTTCCTCGTCTTGTCCGGT
TCCCTATTGACGGCCTACGTGGGCGTGTGTGGGTTGATCGAACGCATGGC
CTCAGACCGCTGCTTGCCCCAATTCCTCCTCAGGCGGAACCCGTGGCGTC
GGACCACTCATAACATCATCCTGGGCTACCTCGTCTTCTCCGCGGTCCTG
GTGCTCATTTTGGAGGGGAATGTCACGGATCTTAGCGGGGTCTACTCGCT
CGCATTCCTGTCGGTCTTGCTACTTTTCACCGTGGGCACCATGCTCCTGA
AATTCAAACGGCCGTCCCTTCCCCGCGACGTGACCGTGTCCTGGATGAGC
GTCGTCGTCGCCTTTACCATGATCCTTGTCGGGCTCTTGGGAAATTTGAT
GGGTAATCCTCAAGTCTTGTTGGTTTTCCTTGCCTACGTGGCGGCCGCAG
GGACCTTGGTGCTGCTCATGTTCCAGTGGACGAATCTCTTGAGATTCACT
GTCTTAGTCTTGAGAGGCATCTGCCCGGGAATCGATACTGGAGTCTTGCA
GAAAGAATTGGCTCTGACCCAGTCCATTCCCGCCATATTTTTCTGCAAGG
CAGATGACGTTTATGTTTTGAATAAGGCTCTGTTGTACGTGACAGCGAAC
GAGCAATCGCGGCATTTGATGGTCATCCATGTGCACGACAAGGACCAGTT
TCCCCCGCCGCTCCTGTCCACGCATGTCGAAAACTTCGACACCATGTACC
CAAAGATCAAATGCACATTGTTAACGATCGAAGGCCACTTTGGACCCCCA
TTGATCGAATTCCTGCATCGGGAGTTGAAAGTCCCAATAAACATGGTGAG
TTGTGGGAAAGGAAGTGTGAAAGGCCAATGGCTGAGACAAAAGATAAGTG
ACGAGGGGCTTAAGGTTTTCAAATGCACATTCCGGCTTGTTATCGCGTTC
TCATGTCTGCATCGGAATATGTACTCCCCCTCATTTGATAAGTTCTTATT
TCTCTTTCATGTACGCTTACAGATGTTTATTGCCGCGCCCGATGAAACGT
TTAAATACAAGTTGGACAAGCTGGGAGGGGTGCGTGTCATCACACACTAG
back to topCoding sequence (CDS) from alignment at CM002458.1:1094936..1097385- >rna2185 ID=rna2185|Name=rna2185|organism=Nannochloropsis gaditana|type=CDS|length=6390bp|location=Sequence derived from alignment at CM002458.1:1094936..1097385- (Nannochloropsis gaditana)
ATGTTTATTGCCGCGCCCGATGAAACGTTTAAATACAAGTTGGACAAGCT
GGGAGGGGTGCGTGTCATCACACACTAGGTTTCTGTACGCTGAGGCCATC
ACCGCCCTTCCCATGAACGGCGGTTCTTTTAACGTGCTTTTGAACAGCAC
CAGCAAAGGCATTGCATCCTCCGCCGCTACACTGGCTCTAGTGTCCTACA
TTGCCACGGGGGTAGTCTCGGCCACGAGCGCTGTCGATTACCTGAAGAAG
GTAGTGTCGGTGCCGAACCCCTTACTTGCCATCCTGGGTCTGCTCTTCCT
ATTTGCCGTCCTGGTTTTCCTCGGGATAAAGGAGAGCGCAGGCGTCGCCC
AAGTCATATTCTGGATTCACATATTCACCTTGACTTTGCTTTGTGCCTGC
TCTATGGTCTACGTGGTTGCGGACCCTTCCACTCTTCGCGAAAATTTCCG
GGCACCCTACCCGGATGTTGAACTTGGTGGAGTGATCCGCTCGGGATCCT
TTGCGACGGCGATTTTTTTCGGCTACACCTCCGCAATTTTGGGCGTGAGT
GGCTTCGAGAGCAGCTCCCAGTTCGTTCAGTCCCAGGCCCCGGGCGTTTT
CCTCAAGACTCTCCGAAACATGTGGGTGGGCGCATTCGTATTCAACCCGA
CGATTTCCTTCCTCTCCCTCGGGGTCTTGCCCCTGGCTCGGATCGTGGAG
GACGAGTCCGTGGTGCTGGCGAAAATGGCCAAGCATGTGGGAGATTGGAT
GTGCGGGGGGGCTGGGGCGGGCGTGGAGGCAAGCCGAAGGCTCGGGGCCG
GCATGGGGGGGGGCCGGTGGCTGGAAATTTGGGTCAGTTTGGATGCCTTC
CTCGTCTTGTCCGGTTCCCTATTGACGGCCTACGTGGGCGTGTGTGGGTT
GATCGAACGCATGGCCTCAGACCGCTGCTTGCCCCAATTCCTCCTCAGGC
GGAACCCGTGGCGTCGGACCACTCATAACATCATCCTGGGCTACCTCGTC
TTCTCCGCGGTCCTGGTGCTCATTTTGGAGGGGAATGTCACGGATCTTAG
CGGGGTCTACTCGCTCGCATTCCTGTCGGTCTTGCTACTTTTCACCGTGG
GCACCATGCTCCTGAAATTCAAACGGCCGTCCCTTCCCCGCGACGTGACC
GTGTCCTGGATGAGCGTCGTCGTCGCCTTTACCATGATCCTTGTCGGGCT
CTTGGGAAATTTGATGGGTAATCCTCAAGTCTTGTTGGTTTTCCTTGCCT
ACGTGGCGGCCGCAGGGACCTTGGTGCTGCTCATGTTCCAGTGGACGAAT
CTCTTGAGATTCACTGTCTTAGTCTTGAGAGGCATCTGCCCGGGAATCGA
TACTGGAGTCTTGCAGAAAGAATTGGCTCTGACCCAGTCCATTCCCGCCA
TATTTTTCTGCAAGGCAGATGACGTTTATGTTTTGAATAAGGCTCTGTTG
TACGTGACAGCGAACGAGCAATCGCGGCATTTGATGGTCATCCATGTGCA
CGACAAGGACCAGTTTCCCCCGCCGCTCCTGTCCACGCATGTCGAAAACT
TCGACACCATGTACCCAAAGATCAAATGCACATTGTTAACGATCGAAGGC
CACTTTGGACCCCCATTGATCGAATTCCTGCATCGGGAGTTGAAAGTCCC
AATAAACATGATGCCATCGCCTACAAAACAAGGAGAGACAGACCGGTCCC
CAGCTACCGAGGCCGAGCCATTGCTTTCTCGCGTGGACAGCATCGAATCC
TGGGGTCTATCCAACCCTGGTGACGCCATCCCCACTACGCGCCACCAACC
TATGCGCCATCAGCTTTCAGACCCGATCACTGGGCCAAGCAAAGGATGGC
GCGATCGCCTCTCCAATAAAAGTAACATTGAGACGTGGACTTTTCCTGGA
TGGGGCCGGTACAATTTACAAATGACTGTGACGGACGAGGAGCTTGCGGA
GATCGAGGCTGATATGGACCAACAGCAGCCTCCGAAACTGAATCAATGGG
AGGCAACAGCCATCTGCGGAAACGACATCATGGCCAGCTGCTTTTACGTG
GTAGGCCTTGTGACTATGTCCGCAGGCAAGATGGCGCCGCTCGCCTTGCT
CTTGGTATCCTGCGTCTTGTATTTAATCAGATGTTTATTGCCGCGCCCGA
TGAAACGTTTAAATACAAGTTGGACAAGCTGGGAGGGGTGCGTGTCATCA
CACACTAGGTTTCTGTACGCTGAGGCCATCACCGCCCTTCCCATGAACGG
CGGTTCTTTTAACGTGCTTTTGAACAGCACCAGCAAAGGCATTGCATCCT
CCGCCGCTACACTGGCTCTAGTGTCCTACATTGCCACGGGGGTAGTCTCG
GCCACGAGCGCTGTCGATTACCTGAAGAAGGTAGTGTCGGTGCCGAACCC
CTTACTTGCCATCCTGGGTCTGCTCTTCCTATTTGCCGTCCTGGTTTTCC
TCGGGATAAAGGAGAGCGCAGGCGTCGCCCAAGTCATATTCTGGATTCAC
ATATTCACCTTGACTTTGCTTTGTGCCTGCTCTATGGTCTACGTGGTTGC
GGACCCTTCCACTCTTCGCGAAAATTTCCGGGCACCCTACCCGGATGTTG
AACTTGGTGGAGTGATCCGCTCGGGATCCTTTGCGACGGCGATTTTTTTC
GGCTACACCTCCGCAATTTTGGGCGTGAGTGGCTTCGAGAGCAGCTCCCA
GTTCGTTCAGTCCCAGGCCCCGGGCGTTTTCCTCAAGACTCTCCGAAACA
TGTGGGTGGGCGCATTCGTATTCAACCCGACGATTTCCTTCCTCTCCCTC
GGGGTCTTGCCCCTGGCTCGGATCGTGGAGGACGAGTCCGTGGTGCTGGC
GAAAATGGCCAAGCATGTGGGAGATTGGATGTGCGGGGGGGCTGGGGCGG
GCGTGGAGGCAAGCCGAAGGCTCGGGGCCGGCATGGGGGGGGGCCGGTGG
CTGGAAATTTGGGTCAGTTTGGATGCCTTCCTCGTCTTGTCCGGTTCCCT
ATTGACGGCCTACGTGGGCGTGTGTGGGTTGATCGAACGCATGGCCTCAG
ACCGCTGCTTGCCCCAATTCCTCCTCAGGCGGAACCCGTGGCGTCGGACC
ACTCATAACATCATCCTGGGCTACCTCGTCTTCTCCGCGGTCCTGGTGCT
CATTTTGGAGGGGAATGTCACGGATCTTAGCGGGGTCTACTCGCTCGCAT
TCCTGTCGGTCTTGCTACTTTTCACCGTGGGCACCATGCTCCTGAAATTC
AAACGGCCGTCCCTTCCCCGCGACGTGACCGTGTCCTGGATGAGCGTCGT
CGTCGCCTTTACCATGATCCTTGTCGGGCTCTTGGGAAATTTGATGGGTA
ATCCTCAAGTCTTGTTGGTTTTCCTTGCCTACGTGGCGGCCGCAGGGACC
TTGGTGCTGCTCATGTTCCAGTGGACGAATCTCTTGAGATTCACTGTCTT
AGTCTTGAGAGGCATCTGCCCGGGAATCGATACTGGAGTCTTGCAGAAAG
AATTGGCTCTGACCCAGTCCATTCCCGCCATATTTTTCTGCAAGGCAGAT
GACGTTTATGTTTTGAATAAGGCTCTGTTGTACGTGACAGCGAACGAGCA
ATCGCGGCATTTGATGGTCATCCATGTGCACGACAAGGACCAGTTTCCCC
CGCCGCTCCTGTCCACGCATGTCGAAAACTTCGACACCATGTACCCAAAG
ATCAAATGCACATTGTTAACGATCGAAGGCCACTTTGGACCCCCATTGAT
CGAATTCCTGCATCGGGAGTTGAAAGTCCCAATAAACATGATGCCATCGC
CTACAAAACAAGGAGAGACAGACCGGTCCCCAGCTACCGAGGCCGAGCCA
TTGCTTTCTCGCGTGGACAGCATCGAATCCTGGGGTCTATCCAACCCTGG
TGACGCCATCCCCACTACGCGCCACCAACCTATGCGCCATCAGCTTTCAG
ACCCGATCACTGGGCCAAGCAAAGGATGGCGCGATCGCCTCTCCAATAAA
AGTAACATTGAGACGTGGACTTTTCCTGGATGGGGCCGGTACAATTTACA
AATGACTGTGACGGACGAGGAGCTTGCGGAGATCGAGGCTGATATGGACC
AACAGCAGCCTCCGAAACTGAATCAATGGGAGGCAACAGCCATCTGCGGA
AACGACATCATGGCCAGCTGCTTTTACGTGGTAGGCCTTGTGACTATGTC
CGCAGGCAAGATGGCGCCGCTCGCCTTGCTCTTGGTATCCTGCGTCTTGT
ATTTAATCAGATGTTTATTGCCGCGCCCGATGAAACGTTTAAATACAAGT
TGGACAAGCTGGGAGGGGTGCGTGTCATCACACACTAGGTTTCTGTACGC
TGAGGCCATCACCGCCCTTCCCATGAACGGCGGTTCTTTTAACGTGCTTT
TGAACAGCACCAGCAAAGGCATTGCATCCTCCGCCGCTACACTGGCTCTA
GTGTCCTACATTGCCACGGGGGTAGTCTCGGCCACGAGCGCTGTCGATTA
CCTGAAGAAGGTAGTGTCGGTGCCGAACCCCTTACTTGCCATCCTGGGTC
TGCTCTTCCTATTTGCCGTCCTGGTTTTCCTCGGGATAAAGGAGAGCGCA
GGCGTCGCCCAAGTCATATTCTGGATTCACATATTCACCTTGACTTTGCT
TTGTGCCTGCTCTATGGTCTACGTGGTTGCGGACCCTTCCACTCTTCGCG
AAAATTTCCGGGCACCCTACCCGGATGTTGAACTTGGTGGAGTGATCCGC
TCGGGATCCTTTGCGACGGCGATTTTTTTCGGCTACACCTCCGCAATTTT
GGGCGTGAGTGGCTTCGAGAGCAGCTCCCAGTTCGTTCAGTCCCAGGCCC
CGGGCGTTTTCCTCAAGACTCTCCGAAACATGTGGGTGGGCGCATTCGTA
TTCAACCCGACGATTTCCTTCCTCTCCCTCGGGGTCTTGCCCCTGGCTCG
GATCGTGGAGGACGAGTCCGTGGTGCTGGCGAAAATGGCCAAGCATGTGG
GAGATTGGATGTGCGGGGGGGCTGGGGCGGGCGTGGAGGCAAGCCGAAGG
CTCGGGGCCGGCATGGGGGGGGGCCGGTGGCTGGAAATTTGGGTCAGTTT
GGATGCCTTCCTCGTCTTGTCCGGTTCCCTATTGACGGCCTACGTGGGCG
TGTGTGGGTTGATCGAACGCATGGCCTCAGACCGCTGCTTGCCCCAATTC
CTCCTCAGGCGGAACCCGTGGCGTCGGACCACTCATAACATCATCCTGGG
CTACCTCGTCTTCTCCGCGGTCCTGGTGCTCATTTTGGAGGGGAATGTCA
CGGATCTTAGCGGGGTCTACTCGCTCGCATTCCTGTCGGTCTTGCTACTT
TTCACCGTGGGCACCATGCTCCTGAAATTCAAACGGCCGTCCCTTCCCCG
CGACGTGACCGTGTCCTGGATGAGCGTCGTCGTCGCCTTTACCATGATCC
TTGTCGGGCTCTTGGGAAATTTGATGGGTAATCCTCAAGTCTTGTTGGTT
TTCCTTGCCTACGTGGCGGCCGCAGGGACCTTGGTGCTGCTCATGTTCCA
GTGGACGAATCTCTTGAGATTCACTGTCTTAGTCTTGAGAGGCATCTGCC
CGGGAATCGATACTGGAGTCTTGCAGAAAGAATTGGCTCTGACCCAGTCC
ATTCCCGCCATATTTTTCTGCAAGGCAGATGACGTTTATGTTTTGAATAA
GGCTCTGTTGTACGTGACAGCGAACGAGCAATCGCGGCATTTGATGGTCA
TCCATGTGCACGACAAGGACCAGTTTCCCCCGCCGCTCCTGTCCACGCAT
GTCGAAAACTTCGACACCATGTACCCAAAGATCAAATGCACATTGTTAAC
GATCGAAGGCCACTTTGGACCCCCATTGATCGAATTCCTGCATCGGGAGT
TGAAAGTCCCAATAAACATGATGCCATCGCCTACAAAACAAGGAGAGACA
GACCGGTCCCCAGCTACCGAGGCCGAGCCATTGCTTTCTCGCGTGGACAG
CATCGAATCCTGGGGTCTATCCAACCCTGGTGACGCCATCCCCACTACGC
GCCACCAACCTATGCGCCATCAGCTTTCAGACCCGATCACTGGGCCAAGC
AAAGGATGGCGCGATCGCCTCTCCAATAAAAGTAACATTGAGACGTGGAC
TTTTCCTGGATGGGGCCGGTACAATTTACAAATGACTGTGACGGACGAGG
AGCTTGCGGAGATCGAGGCTGATATGGACCAACAGCAGCCTCCGAAACTG
AATCAATGGGAGGCAACAGCCATCTGCGGAAACGACATCATGGCCAGCTG
CTTTTACGTGGTAGGCCTTGTGACTATGTCCGCAGGCAAGATGGCGCCGC
TCGCCTTGCTCTTGGTATCCTGCGTCTTGTATTTAATCAG back to top
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