EWM28484.1, cds2177 (CDS) Nannochloropsis gaditana

Overview
NameEWM28484.1
Unique Namecds2177
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1096916..1097385 -
Alignment locationCM002458.1:1095191..1096772 -
Alignment locationCM002458.1:1094936..1095013 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28484.1
Producttransmembrane protein
Orig transcript idgnl|cribi|Naga_100058g12.4251.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1096916..1097385 -
CM002458.1supercontigCM002458.1:1095191..1096772 -
CM002458.1supercontigCM002458.1:1094936..1095013 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0003333amino acid transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015171amino acid transmembrane transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002293AA/rel_permease1
Homology
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|585110900|gb|EWM28484.1| (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 1446.8 bits (3744), Expect = 0.000e+0
Identity = 709/709 (100.00%), Postives = 709/709 (100.00%), Query Frame = 0
Query:    1 MPSPTKQGETDRSPATEAEPLLSRVDSIESWGLSNPGDAIPTTRHQPMRHQLSDPITGPSKGWRDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH 709
            MPSPTKQGETDRSPATEAEPLLSRVDSIESWGLSNPGDAIPTTRHQPMRHQLSDPITGPSKGWRDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH
Sbjct:    1 MPSPTKQGETDRSPATEAEPLLSRVDSIESWGLSNPGDAIPTTRHQPMRHQLSDPITGPSKGWRDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH 709          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|553183134|ref|XP_005853846.1| (amino acid-polyamine-organocation family, partial [Nannochloropsis gaditana CCMP526] >gi|422295216|gb|EKU22515.1| amino acid-polyamine-organocation family, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 766.918 bits (1979), Expect = 0.000e+0
Identity = 376/378 (99.47%), Postives = 376/378 (99.47%), Query Frame = 0
Query:    1 MPSPTKQGETDRSPATEAEPLLSRVDSIESWGLSNPGDAIPTTRHQPMRHQLSDPITGPSKGWRDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVG 378
            MPSPTKQGETDRSPATEAEPLLSRVDSIESWGLSNP DAIPTTRHQPMRHQLSDPITGPSKGWRDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHI TLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVG
Sbjct:    1 MPSPTKQGETDRSPATEAEPLLSRVDSIESWGLSNPSDAIPTTRHQPMRHQLSDPITGPSKGWRDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHILTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVG 378          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|553183137|ref|XP_005853847.1| (amino acid-polyamine-organocation family, partial [Nannochloropsis gaditana CCMP526] >gi|422295217|gb|EKU22516.1| amino acid-polyamine-organocation family, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0
Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
Query:  404 WLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH 709
            WLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH
Sbjct:    1 WLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH 306          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|298710950|emb|CBJ32260.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 323/662 (48.79%), Postives = 437/662 (66.01%), Query Frame = 0
Query:   49 RHQLSDPITGPSKGWRDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADPSTLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHV-HDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVITH 709
            R +++   +  + G   R+S++  +E+W FPGWG +   M      LA      D     KL +W ATAI GNDI++S  YV GLVT  AG ++P+ LL+V+ +LYL RF+Y EAI+ALPMNGG++NVL+N+TSK +AS AA LA++SYIATGVVSA +AV YL+ ++     +   +GLLF FA L+ +GI ESAGVA  +F +H+FTLT +C  S  Y   + + L+EN +  +P V +GG +  G++ TAI FG +SA+LGVSGFESSSQFV+ QA GVF+KTLRNM  G  VFNP I  LSL VLP+  I+E +  +LA MAK VG W  G  G           G+  G     WVSLDAF+VLSG++LTAYVG+ GL+ RMA DRCLPQF+LR+N WR T H  I G+ + +   V+IL+G++T LSGVY+ +FL V+ LF+VGT+LLKFKRPSLPR+VTVS+ + +V  T ++   +GN++  P+V+  FL Y  A G +V+L+F    LL+  +     +C    T  ++ +L   Q  P +FFCK  D YV+NKA+LYV  NE +  L+V+H  +D +      LS H+E FDTMYPKIK +LLT+ G F P  I++L +EL V  N  FI   D  FKYK+ +LGGVRVITH
Sbjct:  118 RSRMASYDSATTLGLPRRVSSRVRLESWEFPGWGSH-FTMN-PPPGLALSNPSKDNGGHEKLGEWYATAISGNDILSSVLYVTGLVTGFAGWLSPVCLLMVAGILYLYRFIYGEAISALPMNGGAYNVLINTTSKPVASFAACLAVISYIATGVVSAATAVSYLQTLIPAAGLMTCTIGLLFFFACLMTMGISESAGVALGMFVVHVFTLTAVCVLSACYAFYNVTILKENLQQDFPAVTVGGTVVEGTWVTAILFGVSSAMLGVSGFESSSQFVEEQAKGVFVKTLRNMQWGVAVFNPAICLLSLCVLPMEEIIEYKHSMLAIMAKRVGYWAGGCLGLPTP-------GLDLGEIFAFWVSLDAFVVLSGAVLTAYVGISGLLARMAKDRCLPQFMLRKNKWRGTYHYTIFGFFLLATSQVIILQGDITTLSGVYTFSFLGVMTLFSVGTILLKFKRPSLPREVTVSYATTLVGITCVITAFVGNMLSKPEVVSWFLIYFMAVGFVVVLVFLRVRLLKILLKFAHPVCCDGVTSSIKDQLHELQDEPFVFFCKQPDTYVINKAILYVRDNEHTNRLIVVHCSNDVEGATIKTLSKHIEMFDTMYPKIKISLLTVTGSFSPGTIDWLSQELGVLKNKFFITCLDSVFKYKIQELGGVRVITH 770          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|1173941330|gb|OQR90523.1| (hypothetical protein THRCLA_09308 [Thraustotheca clavata])

HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0
Identity = 312/656 (47.56%), Postives = 423/656 (64.48%), Query Frame = 0
Query:   71 SNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADP-STLREN-FRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICP----------GIDTG------VLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVIT 708
            SN++ W FPGWG+Y +   V  EEL EIE  + +++  KL++W ATAICGNDI++SC YV GLVT  AGK+APL L+LV+ +LYL RF+Y E + A+PMNGGS+NVLLN+TSK +AS AA+LA++SYIATGVVS TSA  YL   V   + + A +GLLF FAVL  +GI ESA VA VIF IH  TL +LC  S++++  +  S L EN F+  +P+V + G   SG   TA+FFG ++A+LG+SGFESSSQFVQ QAPGVF KTL+NMW G  VFNP +SFLSLGV+P++ I   ++ VL++MA  V                       GG+ L+  VS+DAF+VLSG++LTAYVG+ GL+ R+ASD  LP+FLL  N  RRT H I+ GY   +  LVL+LEGNV  LSGVY+ AFL ++ LF  G MLLKFKR  L RDV   W + +V  ++++V   GNL G+P +L  F  Y +    +V +MF+    LR  +  L+ ICP           + TG      +++    +T + P +FFCK  D+  +NKA+LYV  NEQS +L+++HVHD ++         +  FD +YPK+K   + I+  FGP LIE++  +  +P NMMFI  P     + +  LGGVR+IT
Sbjct:   29 SNVKPWDFPGWGKY-ISTNVKKEELMEIEDTLKRREHRKLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPLDLVLVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSATVPTLSVVPASIGLLFFFAVLTCMGISESAMVALVIFIIHTLTLVVLCVMSVLFMAKNNFSILYENLFQTDFPEVNVAGTWVSGDVFTALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLKNMWWGVAVFNPLLSFLSLGVMPMSNINMFKNTVLSQMALVV-----------------------GGQTLQTIVSIDAFIVLSGAVLTAYVGINGLVRRLASDHILPEFLLHENSCRRTNHWILFGYFGIATSLVLVLEGNVETLSGVYTYAFLGLMTLFGTGCMLLKFKRADLRRDVIAPWWTCIVGVSLVIVAFFGNLCGDPTILTYFALYFSCVIFVVFIMFERLFFLRLIMYALQRICPSREKQSSEDTALATGARGGRTIVKAMRQITNACPTVFFCKNPDLPTINKAILYVRKNEQSCNLVIVHVHDSEEGVSSRFGESIAMFDRIYPKLKIDFIAIQSTFGPALIEWVSTQYSIPKNMMFIKQPSTESVHNIASLGGVRIIT 660          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|669170009|ref|XP_008620353.1| (hypothetical protein SDRG_15944 [Saprolegnia diclina VS20] >gi|530727966|gb|EQC26208.1| hypothetical protein SDRG_15944 [Saprolegnia diclina VS20])

HSP 1 Score: 579.326 bits (1492), Expect = 0.000e+0
Identity = 310/661 (46.90%), Postives = 421/661 (63.69%), Query Frame = 0
Query:   64 RDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADP-STLREN-FRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPG--------IDTG------VLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVIT 708
            R      +N++ W FPGWG+Y +   V  EEL  I+A++ +++ PKL++W ATAICGNDI++SC YV GLVT  AGK+AP++L LV+ +LYL RF+Y E + A+PMNGGS+NVLLN+TSK +AS AA+LA++SYIATGVVS TSA  YL         + + +GLLF FAVL  +GI ESA  A  IF +H  TL  LC  SM+Y+  D  + L +N F   +PDV + G   +G   TA+FFG ++A+LG+SGFESSSQFVQ QAPGVF KTL+NMW G  +FNP IS LSLGV+P+A I   ++ VL++MA  V                       GG  L+  VSLDAF+VLSG++LTAYVG+ GL+ R+ASD  LP FL++ N  RRT H I+ GY   +  LVL+LEGNV  LSGVY+ AFL ++ LF  G MLLKFKR  L RDV   W + ++  ++++V   GNL G+P +L  F  Y +    +V LMF+    LR  + VL+ ICP         + TG      +++    +T++ P +FFCK  D+  +NKA+LYV  NEQ+  L+++HV+D +   P L    +  FD +YPK+K  L+ +E  FGP LIE++  E  +P NMMFI  P     + +  LGGVR+IT
Sbjct:   29 RSLHPTHANLKPWDFPGWGKY-INTEVKPEELRAIDAELKKREHPKLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSSTFPALPVVPSSIGLLFFFAVLTSMGISESAIFALGIFILHTITLVTLCVMSMLYMSRDNFAILYDNLFETSFPDVNVAGTWVTGDVFTALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLKNMWWGVAIFNPLISLLSLGVMPMANINMVKNTVLSQMALVV-----------------------GGPTLQTIVSLDAFIVLSGAVLTAYVGINGLVRRLASDHILPAFLMQENSCRRTNHWILFGYFGVATSLVLVLEGNVETLSGVYTYAFLGLMTLFGSGCMLLKFKRADLKRDVIAPWWACILGVSLVIVAFFGNLCGDPTILTYFALYFSCVLLVVFLMFERLFFLRLAMYVLQRICPSTRKEETKPLATGARGGRTIVKAMRRITEACPTVFFCKQADLASINKAILYVRQNEQTSRLVIVHVYDAETGVPDLFGESIVMFDKIYPKLKIDLVAVESVFGPALIEWVATEYSIPKNMMFIKQPSAEATFNIASLGGVRIIT 665          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|813192778|ref|XP_012208271.1| (hypothetical protein SPRG_13947 [Saprolegnia parasitica CBS 223.65] >gi|641526673|gb|KDO21019.1| hypothetical protein SPRG_13947 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 572.392 bits (1474), Expect = 0.000e+0
Identity = 306/661 (46.29%), Postives = 421/661 (63.69%), Query Frame = 0
Query:   64 RDRLSNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADP-STLREN-FRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPLARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPG--------IDTG------VLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVIT 708
            R      +N++ W FPGWG+Y +   V  +EL  I+A++ +++ PKL++W ATAICGNDI++SC YV GLVT  AGK+AP++L LV+ +LYL RF+Y E + A+PMNGGS+NVLLN+TSK +AS AA+LA++SYIATGVVS TSA  YL         + + +GLLF FAVL  +GI ESA  A  IF +H  TL  LC  SM+Y+  D  + L  N F   +PDV + G   +G   TA+FFG ++A+LG+SGFESSSQFVQ QAPGVF KTL+NMW G  +FNP +S LSLGV+P+A I   ++ VL++MA  V                       GG  L+  VSLDAF+VLSG++LTAYVG+ GL+ R+ASD  LP FL++ N  RRT H I+ GY   +  LVL+LEGNV  LSGVY+ AFL ++ LF  G MLLKFKR +L RDV   W + ++  ++++V   GNL G+P +L  F  Y +    +V LMF+    LR  + VL+ ICP         + TG      +++    +T++ P +FFCK  D+  +NKA+LYV  NEQ+  L+++HV+D ++  P L    +  FD +YPK+K   + +E  FGP LIE++  E  +P NMMFI  P     + +  LGGVR++T
Sbjct:   60 RSLHPTHANLKPWDFPGWGKY-INTEVKPDELRAIDAELKKREHPKLSEWPATAICGNDILSSCLYVSGLVTAKAGKLAPVSLALVAGILYLYRFIYGEVVNAIPMNGGSYNVLLNTTSKRVASIAASLAILSYIATGVVSGTSACTYLSSTFPALPVVPSSIGLLFFFAVLTSMGISESAIFALGIFILHTITLITLCVMSMLYMSRDNFAILYGNLFETAFPDVNVAGTWVTGDVFTALFFGTSTAMLGISGFESSSQFVQEQAPGVFPKTLKNMWWGVAIFNPLLSLLSLGVMPMANINMFKNTVLSQMALVV-----------------------GGPTLQTIVSLDAFIVLSGAVLTAYVGINGLVRRLASDHILPAFLMQENSCRRTNHWILFGYFGVATSLVLLLEGNVETLSGVYTYAFLGLMTLFGSGCMLLKFKRANLKRDVIAPWWTCILGVSLVIVAFFGNLCGDPTILTYFALYFSCVLLVVFLMFERLFFLRIAMYVLQRICPSTRKEESVPLATGARGGRTIVKAMRRITEACPTVFFCKQPDLPSINKAILYVRQNEQTSRLVIVHVYDAERGVPDLFGESIVMFDKIYPKLKIDFVAVESVFGPALIEWVATEYNIPKNMMFIKQPSAEASFNIASLGGVRIVT 696          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|1214713888|gb|OWZ24766.1| (hypothetical protein PHMEG_000122 [Phytophthora megakarya])

HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0
Identity = 312/661 (47.20%), Postives = 420/661 (63.54%), Query Frame = 0
Query:   68 SNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADP-STLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPL---ARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGI------DTGVLQKELALTQSI---------PAI-FFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVIT 708
             N + ++ W FPGWG  N     +D EL EI+  +      KL++W ATAICGNDI++SC YV GLV   AGK+AP+AL +V+ +LYL RF+Y E + A+P+NGGS+NVLLN+TSK +A+ AA+LA++SYIATGVVS TSA +YL   V     + A +GLLF+FA+L  +GI ESA VA VIF  H  TL +LC  S VYVV D   TLR NF   +PD+ L G I SG+F TAIFFG ++A+LG+SGFE+SSQFV+ QA GVF KTLRNMW G  +FNP I+ LSLGVLPL     IV+ ++ VLA+M   V                        G  +++ V+LDAF+VLSG++LTAYVGV GL+ R+ASDR +P FLL  N  R T H II+GY + +  LVLIL G+   LSGVY+ AFL ++ LF +G MLLKFKR  +PR V   W + V+  +M++   +GNL+G+P +L  F  Y  A  +LV +MF+ T LLR ++  +R +CP        +T  L+      Q+I         PA+ FFCK  ++ ++NKA+LYV  NEQ+  L ++H H +    P      V  FD +Y KIK   L++EG FGP ++E++ R+   P N+MFI  P+  F + +  LGGVRVIT
Sbjct:   20 KNTNTLKGWEFPGWGD-NASTVASDSELNEIQTHLSVPHT-KLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVPATIGLLFIFALLSLIGITESAVVALVIFIAHATTLVVLCVLSAVYVVKDDFQTLRANFDTDFPDINLAGDIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMIALLSLGVLPLNGPGGIVDKKNTVLAEMGLKV-----------------------AGERMQLMVALDAFIVLSGAVLTAYVGVVGLVRRLASDRVVPDFLLHVNKARGTNHFIIIGYFMVATSLVLILHGDTETLSGVYTYAFLGLMTLFGIGCMLLKFKRAEIPRSVIAPWWACVLGVSMVITTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMSLYFMRQLCPSQRSDDEDETHSLRTGARGGQTIARFIREINEPAVLFFCKTPNLNIINKAILYVRTNEQTHTLFIVHCHPRGTAVPEGFKETVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYNQPKNLMFIKQPNHDFAHTIASLGGVRVIT 655          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|695387912|ref|XP_009519035.1| (hypothetical protein PHYSODRAFT_485543 [Phytophthora sojae] >gi|348683932|gb|EGZ23747.1| hypothetical protein PHYSODRAFT_485543 [Phytophthora sojae])

HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0
Identity = 318/661 (48.11%), Postives = 420/661 (63.54%), Query Frame = 0
Query:   68 SNKSNIETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADP-STLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPL---ARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICP---GID---TGVLQKELALTQSI---------PAI-FFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVIT 708
             N + ++ W FPGWG  NL    ++ EL EI A      P KL++W ATAICGNDI++SC YV GLV   AGK+AP+AL +V+ +LYL RF+Y E + A+P+NGGS+NVLLN+TSK +A+ AA+LA++SYIATGVVS TSA +YL   V     + A +GLLF+FA+L  +GI ESA VA VIF  H  TLT+LC  S VYV  D   TL  NF   +PD+ L G I SG+F TAIFFG ++A+LG+SGFE+SSQFV+ QA GVF KTLRNMW G  +FNP IS LSLGVLPL     IV+ ++ VLA+M   V                        G  +++ V+LDAF+VLSG++LTAYVGV GL+ R+ASDR +P+FLL  N  R T H II+GY + +  LVLIL G+   LSGVY+ AFL ++ LF +G MLLKFKR  +PR V   W S V+  TM++   +GNL+G+P +L  F  Y  A  +LV +MF+ T LLR  +  +R +CP    ID   T  L+      Q+I         PA+ FFCK  ++ ++NKA+LYV  NEQ+  L ++H H      P      V  FD +Y KIK   L++EG FGP ++E++ R+   P N+MFI  P+  F + +  LGGVRVIT
Sbjct:   38 KNTNALKGWEFPGWGD-NLTAVASESELNEIRAHQSMDHP-KLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVPATVGLLFIFAMLSLIGITESAVVALVIFITHATTLTVLCVLSAVYVWNDGFQTLHANFSTDFPDINLAGDIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMISLLSLGVLPLDGPGGIVDKKNTVLAEMGLKV-----------------------AGENMQLIVALDAFIVLSGAVLTAYVGVVGLVRRLASDRVVPEFLLHVNKARGTNHFIIIGYFLVATSLVLILHGDTETLSGVYTYAFLGLMTLFGMGCMLLKFKRAEIPRSVIAPWWSCVLGVTMVVTTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMCLYCMRQLCPSQRSIDEDETHSLRTGARGGQTIARFIREINEPAVFFFCKTPNLNIINKAILYVRTNEQTHTLYIVHCHPHGTPVPEGFKETVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYSQPKNLMFIKQPNHDFAHTIASLGGVRVIT 673          
BLAST of EWM28484.1 vs. NCBI_GenBank
Match: gi|970634993|gb|KUF80027.1| (Thioredoxin [Phytophthora nicotianae])

HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0
Identity = 311/656 (47.41%), Postives = 415/656 (63.26%), Query Frame = 0
Query:   73 IETWTFPGWGRYNLQMTVTDEELAEIEADMDQQQPPKLNQWEATAICGNDIMASCFYVVGLVTMSAGKMAPLALLLVSCVLYLIRFLYAEAITALPMNGGSFNVLLNSTSKGIASSAATLALVSYIATGVVSATSAVDYLKKVVSVPNPLLAILGLLFLFAVLVFLGIKESAGVAQVIFWIHIFTLTLLCACSMVYVVADP-STLRENFRAPYPDVELGGVIRSGSFATAIFFGYTSAILGVSGFESSSQFVQSQAPGVFLKTLRNMWVGAFVFNPTISFLSLGVLPL---ARIVEDESVVLAKMAKHVGDWMCGGAGAGVEASRRLGAGMGGGRWLEIWVSLDAFLVLSGSLLTAYVGVCGLIERMASDRCLPQFLLRRNPWRRTTHNIILGYLVFSAVLVLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGICPGI------DTGVLQKELALTQSI---------PAI-FFCKADDVYVLNKALLYVTANEQSRHLMVIHVHDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMMFIAAPDETFKYKLDKLGGVRVIT 708
            ++ W FPGWG  N     +D EL EI+A +      KL++W ATAICGNDI++SC YV GLV   AGK+AP+AL +V+ +LYL RF+Y E + A+P+NGGS+NVLLN+TSK +A+ AA+LA++SYIATGVVS TSA +YL   V     + A +GLLF+FAVL  +GI ESA VA VIF  H  TL +LC  S +YVV D   TL  NF   +PD+ L G I SG+F TAIFFG ++A+LG+SGFE+SSQFV+ QA GVF KTLRNMW G  +FNP I+ LSLGVLPL     IV+  + VLA+M   V                        G  +++ V+LDAF+VLSG++LTAYVGV GL+ R+ASDR +P+FLL  N  R T H II GY + +  LVLIL G+   LSGVY+ AFL ++ LF  G MLLKFKR  +PR V   W S ++  +M++   +GNL+G+P +L  F  Y  A  +LV +MF+ T LLR  +  +R +CP        +T  L+      Q+I         PA+ FFCK  ++ ++NKA+LYV  NEQ+  L ++H H +    P      V  FD +Y KIK   L++EG FGP ++E++ R+   P N+MFI  P+  F + +  LGGVRVIT
Sbjct:  180 LKGWEFPGWGD-NSSTVASDSELNEIQAHLSTDHT-KLSEWLATAICGNDILSSCLYVSGLVASKAGKLAPVALAIVAGILYLYRFIYGEVLNAVPLNGGSYNVLLNTTSKRVAAMAASLAILSYIATGVVSGTSACNYLASHVPSLEIVPATVGLLFIFAVLSLIGITESAIVALVIFIAHATTLVVLCVLSAIYVVKDDFQTLWANFDTDFPDINLAGDIMSGNFLTAIFFGTSTAMLGISGFETSSQFVEEQADGVFPKTLRNMWWGVAIFNPMIALLSLGVLPLNGPGGIVDKRNTVLAEMGLKV-----------------------AGEKMQLIVALDAFIVLSGAVLTAYVGVVGLVRRLASDRVVPEFLLHVNKARGTNHFIIFGYFMVATSLVLILHGDTETLSGVYTYAFLGLMTLFGTGCMLLKFKRAEIPRTVIAPWWSCILGVSMVVTTFMGNLLGDPTILTYFSLYFIAVLSLVYIMFERTFLLRMCLYCMRQLCPSQRSNDEDETHSLRTGARGGQTIARFIREINEPAVFFFCKTPNLNIINKAILYVRTNEQTHTLFIVHCHPRGTAVPEGFKETVSMFDHVYLKIKLNFLSVEGPFGPAMVEWVSRKYSQPKNLMFIKQPNHNFAHTIASLGGVRVIT 810          
The following BLAST results are available for this feature:
BLAST of EWM28484.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110900|gb|EWM28484.1|0.000e+0100.00transmembrane protein [Nannochloropsis gaditana][more]
gi|553183134|ref|XP_005853846.1|0.000e+099.47amino acid-polyamine-organocation family, partial ... [more]
gi|553183137|ref|XP_005853847.1|0.000e+0100.00amino acid-polyamine-organocation family, partial ... [more]
gi|298710950|emb|CBJ32260.1|0.000e+048.79conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173941330|gb|OQR90523.1|0.000e+047.56hypothetical protein THRCLA_09308 [Thraustotheca c... [more]
gi|669170009|ref|XP_008620353.1|0.000e+046.90hypothetical protein SDRG_15944 [Saprolegnia dicli... [more]
gi|813192778|ref|XP_012208271.1|0.000e+046.29hypothetical protein SPRG_13947 [Saprolegnia paras... [more]
gi|1214713888|gb|OWZ24766.1|0.000e+047.20hypothetical protein PHMEG_000122 [Phytophthora me... [more]
gi|695387912|ref|XP_009519035.1|0.000e+048.11hypothetical protein PHYSODRAFT_485543 [Phytophtho... [more]
gi|970634993|gb|KUF80027.1|0.000e+047.41Thioredoxin [Phytophthora nicotianae][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2185rna2185Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications