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Properties
| Property Name | Value |
|---|
| Product | 31 kda chloroplastic |
| Orig transcript id | gnl|cribi|Naga_100058g6.4270.mrna |
| Orig protein id | gnl|cribi|Naga_100058g6.4270 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1079309..1081358 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2179 ID=rna2179|Name=rna2179|organism=Nannochloropsis gaditana|type=mRNA|length=2108bp
CACCTGGACACCAACGTGCACACACTTCTGACTAAAATTTTACTAAATTT
TCATTGTAGTGCACAGGCCTTAATATTTCGTTTCAAAGGTGGACGTCTTA
AGTCGTTTTTTACTGGACAAGAGGCCGCCGACTCCCCGGCAGCCTCTGGG
GGGATTCCGGCAGGAGATCGACCTGGCTTCTCTTTCGATTTGAAGTAACA
GCTCGTTGTTTCCCCATTATTGGAGGATGATAGACTCGTCAACGTCTGTG
AGGCCAAGTGATCCTCGGGCCGTAGCGGCTGGTGTTATGTCTGGGACTTT
CCAGCCTCACCAACATAATACCTTGGAGGACGAGCTTCTTGGCCAACACA
TATTCGCGGACCTGATAGCAGCCATGGGCGCGTCGGCTATGGTGGCGCCT
TTCGTCAGTGTCATAGATAAAGCCATCATACAAAATCAAGCCGGGGCCGC
GTCACTGGAGTCCTCCATCGTCTCCTCGTTTCAATCTCTCGTCCGCGACC
CTCTGACCTTCCTCCGGAGGCCAGAGGTCCTCATGGTCTGGACCGTGTAC
GGCGTCACTTACTTCGCTGCCAACCTCGTCAACACCACCAGCAAAGCCTA
CGACTACCAGGCGGACGTGCCCCGCCTCTTGGCTACCACCACGGCCAACA
TGGGCGCCGGTATCGCCAAGGACAGGGCCTACGCACGCATGTTCGGCACC
GTGGCCCCCCGAGGCCTGCCAGCGTCGTCCTACTTGTTTTTTTTCTCGCG
GGACTTGGTGACCATGGGAGCTTCATTCAATGTGCCTGAGCCCTTGGCGC
ATGAGATGCACACAAAGCTGGGCGTGCCTGCAGGAGCGGCGGACGTGGCG
GCCCAGCTCTTCTGTCCCGTGGCCATGCAGTTCCTCACCACCCCCATGCA
CTTGTTGGGTCTGGACCTGTACAACCGGCCCCTCTCCTCCTGGCGGCAAC
GCTACCATTTGATTGCCTCCAACTACCAGAAAACGGTGGCAGCGAGAATA
GCGAGGATCCTTCCTGCCTTTGGGTTCGGGGGTTTGGGGAACAAAAAAAT
CAGGCAGGAGGAGCGTGCCTGGATAAAGCGGCGACAAAACGCTCTGCACA
AAGGGAAGAAAGAACCGGTGGTGGTGTTGGGGCGCGACCGGCATGGAGGA
GAGGAAGGCTTGGTACGTCAAGGGCCAGATAGGCCCACGCTCATGCCGGG
GCTGCTCCCACGTCCCGTGGTACCCTCAATGTTGCCACTCCCGGCTTGGG
CAGTGAATACTAAGTAGAGGAACAGGCAGGTGGAGGGGGGACTTACTACC
TGCACACTCGGATACCGTGAAAATGAAGAGCCACGCCGGGCTTTTATAAA
CGTTCCATGATGGTGGAGCCGGCGACTCTTTGTAAAGTACGTTTGTATGT
ACAGAGCTTAGCGTTCGGGGGAGAACGCGCGAAATACGAAGACATGATAG
TTCAAAGGTCGCTTTCCAGGGCCCCATTAGGAAAAAAAGGGAGAAAGGCT
GGTAAGAGACACTTGTTTCAGGACAGTGCCTATGTGCATAAGCGGTGTTG
GTACAGATAGGCGCATACAGTGGCGGTGCCGTGAGGACAGGGTTTGTAGG
TGCCCAATTGAAATGCGCTTATAAAGAAGGGATGAAAGACGCAGTAAAGC
TTTTCTAAGCACCAGGTTCTCAAAGCTTGGAAAAGAGGGGACCATTTCCT
GTCGTCCTCCGTGTCGTCATGTGATGCGACCAGACGTTCAGTTGGTTCCT
CTCCTGCAAGTCAGACTCAATTTTGAAGAAGTCTCGGTATGCAGCTCACG
TGTAAATAGCGGGAGGATAAGGGGGAGGGAATGTCATATGCCTCAGACAA
GCAAGTGACATCGTAGAATGAAACGACTTGACCTGATTGAGCTCGAATCA
TGACCCTACGAGAGCCTCAGCTATTCTGCTCGACACATCTCCTACTCTAG
GAGACACTATATTTCATAAAATTTGATTGTGTACGCCGATTCCATCTATC
GCTCACTTCCCAACCGCGTAGTTGAGCACAAAAGAAAGCGCAAATCGGGG
TCCAGACGGACATTGAAATCCAGAGCAAGCAACGGCGTGCATCAATTAGT
ACATTCCT back to topprotein sequence of rna2179 >rna2179-protein ID=rna2179-protein|Name=rna2179|organism=Nannochloropsis gaditana|type=polypeptide|length=296bp
MAIDSIAEEGGRKKKDDVRHAGEEVAGAESNGRKRKRKRSRKTHKKAEDD
EEEGWVSEEDGTTGRAGEEEEGYDNAPSSTPESGRPDGSAAAAGTVYVEG
ISYEATEDDLVRFFQDKGCGKVKEVRLPRWQDSGRPRGYAHIEFKKTDEG
VAKALSLSGARMMGRYLTVQRAQAPKSLGVGGSLPLKDKPPGCDTVFVKN
LPYNTTEDAVREAFTFCGKIKTVRLAVWQHTQQQKGFCYVQFEKENAAEI
AVKKQGAIQVGGRKVFVDYETGAPKASYRAPDGRQWSKAQKKMRRS back to topmRNA from alignment at CM002458.1:1079309..1081358- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2179 ID=rna2179|Name=rna2179|organism=Nannochloropsis gaditana|type=mRNA|length=2050bp|location=Sequence derived from alignment at CM002458.1:1079309..1081358- (Nannochloropsis gaditana)
TGGGATCGTTAGTACGAACAGACCGTTCGTAATCCCGAGTCTTAGTATCT
TCCCGTGGCCTCAATGCCTTCATGCTTTTTAAAATACGACTTGCAAAGTC
ACGCGAGCTTACCCAATAAAATGCATGGAGGTGTTCGAACAGGCTCGAAA
GATTCTGATCATGGCGCATAAAGACGCCCGTAGCCCCATTGCCTGCACAT
TTGTCGCAATCTTGCAGGTCTACAGCTGTTATTTTTAGTAACAACTAGCG
CACCTAAAGATTGGGTGTGAAGACTACTGCTCTTTTTTACGTGTAGAGAA
GTGTGTCAATCGTTTGTCCTTTGCGCAATTCAAGTATGCCTTGGCGTGAT
TGCAGCGTTCGCAGCGGTATCGTTCCATACTTTGTCACACCAGCACACTT
ACCGCGCTATGCTTGACTTCGCCCTCTAATCATCATTTTTGGATCATCTC
TGGTTTCTATAATCAGCCTGACACCAGAAGAAAGAGAGAAAAAGGGCAAG
GAATAGCTTCTGCTTGCGAGGGAAGCAATTGAAGAGCCTGGCAGCAACAT
GGCGATCGACTCTATCGCAGAGGAAGGGGGGAGAAAAAAAAAAGACGACG
TGAGACACGCAGGAGAGGAGGTTGCCGGCGCGGAAAGTAATGGTCGTAAG
CGCAAGCGCAAACGCTCGCGGAAAACGCATAAAAAGGCGGAGGATGACGA
GGAGGAAGGATGGGTTTCGGAGGAGGACGGCACTACGGGCAGGGCGGGGG
AAGAGGAGGAGGGCTATGACAACGCGCCATCATCAACACCTGAAAGCGGT
CGTCCTGACGGTAGCGCAGCTGCCGCGGGTACCGTATACGTAGAAGGTAT
ATCGTACGAGGCAACAGAAGACGACCTTGTTCGTTTCTTTCAGGACAAGG
GGTGTGGGAAAGTAAAAGAAGTCCGCCTCCCCCGTTGGCAAGACAGCGGT
CGTCCCCGTGGGTATGCCCACATCGAGTTCAAGAAAACGGACGAAGGCGT
TGCCAAAGCGTTGTCCCTGAGCGGCGCAAGGATGATGGGACGATACTTGA
CGGTGCAAAGGGCACAAGCACCCAAAAGCTTGGGTGTTGGTGGAAGTCTG
CCGTTGAAGGACAAGCCGCCAGGTGCGTCGACTGGGCAGGGAAGAAGAGG
AAAGCGGGCTGTGGGGGGGTACAGGAATGGATTAAGGCGGGATATGGACA
TGGGAATGCACAGGGTGGATGATAGCACCGATCACAGGGCGCGTGTCCAG
AGGATTAGTACCATTTGAAAAGTTTGAGATCTGCAATGGCGTTGAAGAAC
ACAAATACGAGTAGTGAAATGATGGACACAAAGACCCCCACCAAGAGCAT
GAGAACGACGTCCACCATGAAACAGAATCACTACTCATAAAGCTGCACTT
TCATTTTCTCTTTTTTTCATCCACAATTTAGGTTGCGACACAGTATTCGT
CAAAAATCTGTGCGTAAGGAAAACTTTTCGATGTAACCCCCCTTCTTGCC
CTCCATTTTTTTTCTCTGGGAACCATTCCCCCACCGCGTTCATCCTGACC
TATTCTCTTTCACTCCTTTTGCCCCTCCTGTTATCTTCCCTCAGGCCCTA
CAACACTACGGAAGACGCGGTGCGCGAGGCCTTCACGTTCTGCGGGAAGA
TCAAGACGGTTCGCCTGGCCGTATGGCAGCACACGCAGCAGCAGAAAGGC
TTTTGCTACGTACAATTCGAGAAGGAGAATGCGGCGGAAATTGCGGTCAA
GAAGCAGGGGGCGATCCAAGTGGGCGGGAGGAAGGTCTTTGTCGACTACG
AGACGGGGGCACCAAAAGCGAGCTACAGGGCACCCGACGGTCGGCAGTGG
AGCAAGGCGCAAAAAAAAATGAGAAGATCGTGAGAGGATGAATGGAGGCA
TGCACGAAAGAATTTACGCGTGAGGCAAGGAATGTACTAATTGATGCACG
CCGTTGCTTGCTCTGGATTTCAATGTCCGTCTGGACCCCGATTTGCGCTT
TCTTTTGTGCTCAACTACGCGGTTGGGAAGTGAGCGATAGATGGAATCGG
back to topCoding sequence (CDS) from alignment at CM002458.1:1079309..1081358- >rna2179 ID=rna2179|Name=rna2179|organism=Nannochloropsis gaditana|type=CDS|length=2673bp|location=Sequence derived from alignment at CM002458.1:1079309..1081358- (Nannochloropsis gaditana)
GCCCTACAACACTACGGAAGACGCGGTGCGCGAGGCCTTCACGTTCTGCG
GGAAGATCAAGACGGTTCGCCTGGCCGTATGGCAGCACACGCAGCAGCAG
AAAGGCTTTTGCTACGTACAATTCGAGAAGGAGAATGCGGCGGAAATTGC
GGTCAAGAAGCAGGGGGCGATCCAAGTGGGCGGGAGGAAGGTCTTTGTCG
ACTACGAGACGGGGGCACCAAAAGCGAGCTACAGGGCACCCGACGGTCGG
CAGTGGAGCAAGGCGCAAAAAAAAATGAGAAGATCGTGAGTTGCGACACA
GTATTCGTCAAAAATCTATGGCGATCGACTCTATCGCAGAGGAAGGGGGG
AGAAAAAAAAAAGACGACGTGAGACACGCAGGAGAGGAGGTTGCCGGCGC
GGAAAGTAATGGTCGTAAGCGCAAGCGCAAACGCTCGCGGAAAACGCATA
AAAAGGCGGAGGATGACGAGGAGGAAGGATGGGTTTCGGAGGAGGACGGC
ACTACGGGCAGGGCGGGGGAAGAGGAGGAGGGCTATGACAACGCGCCATC
ATCAACACCTGAAAGCGGTCGTCCTGACGGTAGCGCAGCTGCCGCGGGTA
CCGTATACGTAGAAGGTATATCGTACGAGGCAACAGAAGACGACCTTGTT
CGTTTCTTTCAGGACAAGGGGTGTGGGAAAGTAAAAGAAGTCCGCCTCCC
CCGTTGGCAAGACAGCGGTCGTCCCCGTGGGTATGCCCACATCGAGTTCA
AGAAAACGGACGAAGGCGTTGCCAAAGCGTTGTCCCTGAGCGGCGCAAGG
ATGATGGGACGATACTTGACGGTGCAAAGGGCACAAGCACCCAAAAGCTT
GGGTGTTGGTGGAAGTCTGCCGTTGAAGGACAAGCCGCCAGGCCCTACAA
CACTACGGAAGACGCGGTGCGCGAGGCCTTCACGTTCTGCGGGAAGATCA
AGACGGTTCGCCTGGCCGTATGGCAGCACACGCAGCAGCAGAAAGGCTTT
TGCTACGTACAATTCGAGAAGGAGAATGCGGCGGAAATTGCGGTCAAGAA
GCAGGGGGCGATCCAAGTGGGCGGGAGGAAGGTCTTTGTCGACTACGAGA
CGGGGGCACCAAAAGCGAGCTACAGGGCACCCGACGGTCGGCAGTGGAGC
AAGGCGCAAAAAAAAATGAGAAGATCGTGAGTTGCGACACAGTATTCGTC
AAAAATCTATGGCGATCGACTCTATCGCAGAGGAAGGGGGGAGAAAAAAA
AAAGACGACGTGAGACACGCAGGAGAGGAGGTTGCCGGCGCGGAAAGTAA
TGGTCGTAAGCGCAAGCGCAAACGCTCGCGGAAAACGCATAAAAAGGCGG
AGGATGACGAGGAGGAAGGATGGGTTTCGGAGGAGGACGGCACTACGGGC
AGGGCGGGGGAAGAGGAGGAGGGCTATGACAACGCGCCATCATCAACACC
TGAAAGCGGTCGTCCTGACGGTAGCGCAGCTGCCGCGGGTACCGTATACG
TAGAAGGTATATCGTACGAGGCAACAGAAGACGACCTTGTTCGTTTCTTT
CAGGACAAGGGGTGTGGGAAAGTAAAAGAAGTCCGCCTCCCCCGTTGGCA
AGACAGCGGTCGTCCCCGTGGGTATGCCCACATCGAGTTCAAGAAAACGG
ACGAAGGCGTTGCCAAAGCGTTGTCCCTGAGCGGCGCAAGGATGATGGGA
CGATACTTGACGGTGCAAAGGGCACAAGCACCCAAAAGCTTGGGTGTTGG
TGGAAGTCTGCCGTTGAAGGACAAGCCGCCAGGCCCTACAACACTACGGA
AGACGCGGTGCGCGAGGCCTTCACGTTCTGCGGGAAGATCAAGACGGTTC
GCCTGGCCGTATGGCAGCACACGCAGCAGCAGAAAGGCTTTTGCTACGTA
CAATTCGAGAAGGAGAATGCGGCGGAAATTGCGGTCAAGAAGCAGGGGGC
GATCCAAGTGGGCGGGAGGAAGGTCTTTGTCGACTACGAGACGGGGGCAC
CAAAAGCGAGCTACAGGGCACCCGACGGTCGGCAGTGGAGCAAGGCGCAA
AAAAAAATGAGAAGATCGTGAGTTGCGACACAGTATTCGTCAAAAATCTA
TGGCGATCGACTCTATCGCAGAGGAAGGGGGGAGAAAAAAAAAAGACGAC
GTGAGACACGCAGGAGAGGAGGTTGCCGGCGCGGAAAGTAATGGTCGTAA
GCGCAAGCGCAAACGCTCGCGGAAAACGCATAAAAAGGCGGAGGATGACG
AGGAGGAAGGATGGGTTTCGGAGGAGGACGGCACTACGGGCAGGGCGGGG
GAAGAGGAGGAGGGCTATGACAACGCGCCATCATCAACACCTGAAAGCGG
TCGTCCTGACGGTAGCGCAGCTGCCGCGGGTACCGTATACGTAGAAGGTA
TATCGTACGAGGCAACAGAAGACGACCTTGTTCGTTTCTTTCAGGACAAG
GGGTGTGGGAAAGTAAAAGAAGTCCGCCTCCCCCGTTGGCAAGACAGCGG
TCGTCCCCGTGGGTATGCCCACATCGAGTTCAAGAAAACGGACGAAGGCG
TTGCCAAAGCGTTGTCCCTGAGCGGCGCAAGGATGATGGGACGATACTTG
ACGGTGCAAAGGGCACAAGCACCCAAAAGCTTGGGTGTTGGTGGAAGTCT
GCCGTTGAAGGACAAGCCGCCAG back to top
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