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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100131g1.7455.mrna |
| Orig protein id | gnl|cribi|Naga_100131g1.7455 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1065775..1067241 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2173 ID=rna2173|Name=rna2173|organism=Nannochloropsis gaditana|type=mRNA|length=381bp
ATGTTTGCACATGATGTTGGCGAGTATTGCCATTGTTTTATGATTCGCTA
TCTTCCCCTCCACGCAACATGTGCAGTGGCATTTTCTAACGATGACATCC
AAACGGCGTTCAGCAGCGGCACTACCGCAACGGATGCGACACTACGCATC
GTGACCAAGGCGGGAGCAGAGAAACCGATGGAGATATGCGCGCTGCTGAA
TGCCGCTTCGATGTCACCGTTCGAAGACGTCGCCCACATTATTCTCCCTC
CTTCTGGTACCCCCCAACCCTACCACCCAACTTGCTCGTGTCCATTGCGT
TTGAAAGATGGCGTCCCCACGAAGTGCAAAAACCATAAAAGATGGGAAGC
AATAGCTATTCAAATTTGGTGTATATCTTAG back to topprotein sequence of rna2173 >rna2173-protein ID=rna2173-protein|Name=rna2173|organism=Nannochloropsis gaditana|type=polypeptide|length=169bp
MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHA
VGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHK
CHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRSSVQ
YGHMLRLPVVDTSKNGFEA back to topmRNA from alignment at CM002458.1:1065775..1067241+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2173 ID=rna2173|Name=rna2173|organism=Nannochloropsis gaditana|type=mRNA|length=1467bp|location=Sequence derived from alignment at CM002458.1:1065775..1067241+ (Nannochloropsis gaditana)
TGGCGAAGCCACGCTGACGATCAAAGCTGGACACACTCGCCCCTTGGTTG
ACAAAAACACTTCGATTTTGACCTTTTCGAGCTCAAAAGTACCTTATTTA
CTCGGAGGTCTAACGTCTGATACACTTTTCACAGTGAATGGGGGCATCTG
GTCGTTTTGAATGAGTTGCAAGCCTGCATCTCTTCGGAAAGGAACTAAGT
TGGCTCGCAACGAACTGATTTGCTGTGAGGAGATCCCAGAGGACAGGCTA
ATATAAGCAAACAAGCCCAAACACACGCATCCAAGGGCCTCACATTTCTC
TGCCATGACGGCCACCCTGGTCTACCAGGTCCCTGGAGGGGATTTCGGGG
CGTATCTTCTTGGACCTTGGAAGCGCACGCTCGAGTGTCGAGAATTCGGA
AAAAGCTACGAGCATCAACGCACATCCAACTCAGTGGTGGTGATTGAGCA
CGCCGTGGGAGTGGCTGCTGAACCACCGACTTATGTAAGGGCGACTATTG
GATTGAGGGTGCTTTGATGTTGCTTTATCTTGTGGGCAGAGTATGGCAGG
CATAATCCGACGATAAGCAGGCTTTAATGAACGAAATATGATCCAATAAG
TTATGTTTGACGATTTGCGAGTAAACGAAACGTTCTTAATGCATGCAATG
TTTGGAAATCAGGCGCTGGAGGGGCAAGGATGACTCTTCTTCATTGGTTT
CGAGCATATTAACTCCATATTTATTTCTCCTTTATTTTACCTCCAAATTC
CAGTTTCTCAATTGGAAATTTGGCCGatctttggaggaggaagatttGAA
ATTAGGCTTCTGCATGCATTTTATGCAGGATCCGGACATTACAAATCTAG
AATGGCGGTTCGAAGGTATGAGGATTCGAGGCGGCGGGAACGGGAAACGT
CTGTTCTGGATAAATTGGTCTCACTACGAGCTGCTAAAAAAATAAAACGC
AAATCAAAAGTACTTATTTTTGTTTTGACATTTTCAATTACAACCAATAG
AGCACAAATGCCATGGCTGGTTTTTGCCAAGTATCTCCGTGGCAACTCTC
AATTTCCGGTCTTATGATCGCTCGACTACCGTCACATATCGAGTCGTCGA
CGAGGACACGATGGCAGTCTCTATTGTAGAAGTGGAAAGCCAGCGTTCAT
CCGTGCAATACGGTCACATGCTCCGCCTACCGGTTGTGGACACTAGCAAA
AATGGCTTCGAAGGTGGGGGTagtgaaggcggagagagaTGGTGATTGGA
GGCATGGTCAAGAACACGAACTGATATCAAGATGCATACCTGTAAAACAG
AATGACGCAATGAACGTTGTCGTTCCTAGCTGAGACTGATTCTATCAATA
TTTTTTGATTTATGCTTCTCAATTTCAACCTTACAGCGTGAACGGCTCGA
TCGCAAAAATCTCTGCTCGCATGCGTCTTGGTGCTGAGGATTCGACCCTC
TTCAAAAATTTCATACA back to topCoding sequence (CDS) from alignment at CM002458.1:1065775..1067241+ >rna2173 ID=rna2173|Name=rna2173|organism=Nannochloropsis gaditana|type=CDS|length=2040bp|location=Sequence derived from alignment at CM002458.1:1065775..1067241+ (Nannochloropsis gaditana)
ATGACGGCCACCCTGGTCTACCAGGTCCCTGGAGGGGATTTCGGGGCGTA
TCTTCTTGGACCTTGGAAGCGCACGCTCGAGTGTCGAGAATTCGGAAAAA
GCTACGAGCATCAACGCACATCCAACTCAGTGGTGGTGATTGAGCACGCC
GTGGGAGTGGCTGCTGAACCACCGACTTATTTTCTCAATTGGAAATTTGG
CCGatctttggaggaggaagatttGAAATTAGGCTTCTGCATGCATTTTA
TGCAGGATCCGGACATTACAAATCTAGAATGGCGGTTCGAAGAGCACAAA
TGCCATGGCTGGTTTTTGCCAAGTATCTCCGTGGCAACTCTCAATTTCCG
GTCTTATGATCGCTCGACTACCGTCACATATCGAGTCGTCGACGAGGACA
CGATGGCAGTCTCTATTGTAGAAGTGGAAAGCCAGCGTTCATCCGTGCAA
TACGGTCACATGCTCCGCCTACCGGTTGTGGACACTAGCAAAAATGGCTT
CGAAGCGTGAATGACGGCCACCCTGGTCTACCAGGTCCCTGGAGGGGATT
TCGGGGCGTATCTTCTTGGACCTTGGAAGCGCACGCTCGAGTGTCGAGAA
TTCGGAAAAAGCTACGAGCATCAACGCACATCCAACTCAGTGGTGGTGAT
TGAGCACGCCGTGGGAGTGGCTGCTGAACCACCGACTTATTTTCTCAATT
GGAAATTTGGCCGatctttggaggaggaagatttGAAATTAGGCTTCTGC
ATGCATTTTATGCAGGATCCGGACATTACAAATCTAGAATGGCGGTTCGA
AGAGCACAAATGCCATGGCTGGTTTTTGCCAAGTATCTCCGTGGCAACTC
TCAATTTCCGGTCTTATGATCGCTCGACTACCGTCACATATCGAGTCGTC
GACGAGGACACGATGGCAGTCTCTATTGTAGAAGTGGAAAGCCAGCGTTC
ATCCGTGCAATACGGTCACATGCTCCGCCTACCGGTTGTGGACACTAGCA
AAAATGGCTTCGAAGCGTGAATGACGGCCACCCTGGTCTACCAGGTCCCT
GGAGGGGATTTCGGGGCGTATCTTCTTGGACCTTGGAAGCGCACGCTCGA
GTGTCGAGAATTCGGAAAAAGCTACGAGCATCAACGCACATCCAACTCAG
TGGTGGTGATTGAGCACGCCGTGGGAGTGGCTGCTGAACCACCGACTTAT
TTTCTCAATTGGAAATTTGGCCGatctttggaggaggaagatttGAAATT
AGGCTTCTGCATGCATTTTATGCAGGATCCGGACATTACAAATCTAGAAT
GGCGGTTCGAAGAGCACAAATGCCATGGCTGGTTTTTGCCAAGTATCTCC
GTGGCAACTCTCAATTTCCGGTCTTATGATCGCTCGACTACCGTCACATA
TCGAGTCGTCGACGAGGACACGATGGCAGTCTCTATTGTAGAAGTGGAAA
GCCAGCGTTCATCCGTGCAATACGGTCACATGCTCCGCCTACCGGTTGTG
GACACTAGCAAAAATGGCTTCGAAGCGTGAATGACGGCCACCCTGGTCTA
CCAGGTCCCTGGAGGGGATTTCGGGGCGTATCTTCTTGGACCTTGGAAGC
GCACGCTCGAGTGTCGAGAATTCGGAAAAAGCTACGAGCATCAACGCACA
TCCAACTCAGTGGTGGTGATTGAGCACGCCGTGGGAGTGGCTGCTGAACC
ACCGACTTATTTTCTCAATTGGAAATTTGGCCGatctttggaggaggaag
atttGAAATTAGGCTTCTGCATGCATTTTATGCAGGATCCGGACATTACA
AATCTAGAATGGCGGTTCGAAGAGCACAAATGCCATGGCTGGTTTTTGCC
AAGTATCTCCGTGGCAACTCTCAATTTCCGGTCTTATGATCGCTCGACTA
CCGTCACATATCGAGTCGTCGACGAGGACACGATGGCAGTCTCTATTGTA
GAAGTGGAAAGCCAGCGTTCATCCGTGCAATACGGTCACATGCTCCGCCT
ACCGGTTGTGGACACTAGCAAAAATGGCTTCGAAGCGTGA back to top
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