EWM28510.1, cds2165 (CDS) Nannochloropsis gaditana

Overview
NameEWM28510.1
Unique Namecds2165
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1066079..1066258 +
Alignment locationCM002458.1:1066528..1066639 +
Alignment locationCM002458.1:1066775..1066987 +
Alignment locationCM002458.1:1067161..1067165 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM28510.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100131g1.7455.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1066079..1066258 +
CM002458.1supercontigCM002458.1:1066528..1066639 +
CM002458.1supercontigCM002458.1:1066775..1066987 +
CM002458.1supercontigCM002458.1:1067161..1067165 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|585110927|gb|EWM28510.1| (hypothetical protein Naga_100131g1 [Nannochloropsis gaditana])

HSP 1 Score: 357.066 bits (915), Expect = 6.650e-125
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
Query:    1 MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRSSVQYGHMLRLPVVDTSKNGFEA 169
            MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRSSVQYGHMLRLPVVDTSKNGFEA
Sbjct:    1 MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRSSVQYGHMLRLPVVDTSKNGFEA 169          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|698784063|ref|XP_009825075.1| (hypothetical protein H257_02934 [Aphanomyces astaci] >gi|574119578|gb|ETV85057.1| hypothetical protein H257_02934 [Aphanomyces astaci])

HSP 1 Score: 155.606 bits (392), Expect = 2.750e-45
Identity = 75/156 (48.08%), Postives = 100/156 (64.10%), Query Frame = 0
Query:    3 ATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHMLRL 157
            +T  Y+V  GDF AYL+G WKRTLE R FG ++ H RT+N+VVVIE     A +P T FL W FGR L + +L   + + F+ D   T +EW FE   CHG F P  SVA  NF  +D   T+TYR++D  TMAV IV+V+S  + ++QYG+M R+
Sbjct:    2 STTRYEVKDGDFSAYLVGTWKRTLEWRNFGSTFGHVRTTNNVVVIEEDTTAAKQPNTKFLKWSFGRGLRKNELTAAYTIQFIPDDKGTFMEWSFEGATCHGLFKPEASVAIFNFCLHDSMVTITYRMLDASTMAVCIVDVDSDHTPTIQYGNMYRI 157          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|673023908|ref|XP_008865915.1| (hypothetical protein H310_03723 [Aphanomyces invadans] >gi|574479143|gb|ETW06138.1| hypothetical protein H310_03723 [Aphanomyces invadans])

HSP 1 Score: 155.221 bits (391), Expect = 3.398e-45
Identity = 74/156 (47.44%), Postives = 101/156 (64.74%), Query Frame = 0
Query:    3 ATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHMLRL 157
            +T  + V  GDF AYL+G WKRTLE R FG S+ H RT+N+VVVIE     A +P T FL W FGR L + +L + + + F+ D   T +EW FE   CHG F P  SVA  NF  ++   T+TYR++D +TMAV IV+V+S  + ++QYG+M R+
Sbjct:    2 STTRFDVKDGDFAAYLVGTWKRTLEWRNFGSSFGHLRTTNNVVVIEEDTTAAKQPNTTFLKWSFGRGLRKNELTVAYTIQFIPDNKGTFMEWSFEGAMCHGLFKPEASVAIFNFCLHESMVTITYRILDANTMAVCIVDVDSDHTPTIQYGNMYRI 157          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|669152724|ref|XP_008611924.1| (hypothetical protein SDRG_07846 [Saprolegnia diclina VS20] >gi|530736276|gb|EQC34518.1| hypothetical protein SDRG_07846 [Saprolegnia diclina VS20])

HSP 1 Score: 154.451 bits (389), Expect = 8.903e-45
Identity = 77/165 (46.67%), Postives = 106/165 (64.24%), Query Frame = 0
Query:    1 MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHMLRLPVVDTSK 164
            M +   + VPGGDF +YLLG WKRTLE R FG +++H RT+N+VV+IE  +  A +P T FL W FGR + + +L   + + F+ D   T +EW FE   CHG F P  SVA  NF   +   T+TYRV+D +TMAV IV+V+S  + ++QYG+M R   +D SK
Sbjct:    1 MNSATRFDVPGGDFCSYLLGTWKRTLEWRNFGSTFKHLRTTNNVVLIEEDMLAAKQPNTRFLKWSFGRGIRKSELTNAYTIQFIPDEQGTFMEWSFEGVTCHGLFKPESSVAIFNFCLQESMVTITYRVLDANTMAVCIVDVDSDHAPTIQYGNMYR---IDPSK 162          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|675186137|ref|XP_008901953.1| (hypothetical protein PPTG_08956, partial [Phytophthora parasitica INRA-310] >gi|566029223|gb|ETI52134.1| hypothetical protein F443_04657, partial [Phytophthora parasitica P1569] >gi|567966830|gb|ETK92022.1| hypothetical protein L915_04542, partial [Phytophthora parasitica] >gi|567995265|gb|ETL45404.1| hypothetical protein L916_04496, partial [Phytophthora parasitica] >gi|568024551|gb|ETL98583.1| hypothetical protein L917_04375, partial [Phytophthora parasitica] >gi|568054986|gb|ETM51750.1| hypothetical protein L914_04476, partial [Phytophthora parasitica] >gi|568098214|gb|ETN12949.1| hypothetical protein PPTG_08956, partial [Phytophthora parasitica INRA-310] >gi|570332960|gb|ETO80908.1| hypothetical protein F444_04688, partial [Phytophthora parasitica P1976] >gi|570956957|gb|ETP21936.1| hypothetical protein F441_04644, partial [Phytophthora parasitica CJ01A1] >gi|570992322|gb|ETP49841.1| hypothetical protein F442_04705, partial [Phytophthora parasitica P10297])

HSP 1 Score: 153.295 bits (386), Expect = 4.497e-44
Identity = 73/152 (48.03%), Postives = 102/152 (67.11%), Query Frame = 0
Query:    7 YQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHMLRL 157
            Y VP GDF AYL G WKR LE R FG S++H R++N++V IE  +  A +P T FL W FGR+L+++DL   + + F+ D   T +EW FE   CHG F P  +VA LNF   +   T+TYRV+D +TMAV IV+V+S+ + ++QYG+M R+
Sbjct:   27 YDVPNGDFCAYLKGFWKRNLEWRRFGASFKHLRSTNNIVFIEEDLDAARQPNTQFLRWSFGRTLKQQDLASAYTVQFIPDEQGTFMEWSFEGVTCHGVFKPEANVAILNFCLQESMVTITYRVLDANTMAVCIVDVDSEHTPTIQYGNMYRI 178          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|695401831|ref|XP_009522867.1| (hypothetical protein PHYSODRAFT_312938 [Phytophthora sojae] >gi|348680334|gb|EGZ20150.1| hypothetical protein PHYSODRAFT_312938 [Phytophthora sojae])

HSP 1 Score: 151.754 bits (382), Expect = 8.631e-44
Identity = 75/157 (47.77%), Postives = 103/157 (65.61%), Query Frame = 0
Query:    2 TATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHMLRL 157
            T  + Y VP GDF AYL G WKR LE R FG S++H R++N+VV IE  +  A +P T FL W FGR+ +++DL   + + F+ D   T +EW FE   CHG F P  SVA LNF   +   T+TYRV+D +TMAV IV+V+S+ + ++QYG+M R+
Sbjct:    6 TNVVRYDVPNGDFCAYLKGFWKRNLEWRHFGASFKHLRSTNNVVFIEEDLDAARQPNTQFLRWSFGRTHKKQDLASAYTVQFIPDEQGTFMEWSFEGVTCHGVFKPEASVAILNFCLQESMVTITYRVLDANTMAVCIVDVDSEHTPTIQYGNMYRI 162          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|1173933929|gb|OQR85465.1| (hypothetical protein ACHHYP_11812 [Achlya hypogyna])

HSP 1 Score: 151.369 bits (381), Expect = 1.594e-43
Identity = 72/155 (46.45%), Postives = 99/155 (63.87%), Query Frame = 0
Query:    1 MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHM 154
            M +   Y VP  DFG+YLLG WKRTLE R FG +++H RT+N+VV++E     A +P T FL W FGR + + +L   + + F+ D   T +EW FE   CHG F P  SVA  NF   +   T+TYRV+D +TMAV IV+V+S  + ++QYG+M
Sbjct:    1 MNSATRYDVPDADFGSYLLGTWKRTLEWRNFGSTFKHIRTTNNVVLVEEDTQAAKQPNTRFLKWSFGRGIRKSELTSAYTIQFIPDEQGTFMEWSFEGVTCHGLFKPESSVAIFNFCLQESMVTITYRVLDANTMAVCIVDVDSDHTPTIQYGNM 155          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|1173955627|gb|OQS02568.1| (hypothetical protein THRCLA_21388 [Thraustotheca clavata])

HSP 1 Score: 150.599 bits (379), Expect = 2.651e-43
Identity = 77/165 (46.67%), Postives = 105/165 (63.64%), Query Frame = 0
Query:    1 MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHMLRLPVVDTSK 164
            M+AT  Y VP GD  +YLLG WKRTLE R FG +Y+H RTSN+VV+IE     A +P T FL W FGR + + +L   + + F+ D     +EW FE   CHG F P  SVA  NF   +   T+TYR++D +TMAV I++V+S+ + ++QYG+M R   +D SK
Sbjct:    1 MSATR-YDVPNGDLCSYLLGTWKRTLEWRNFGSTYKHLRTSNNVVLIEEDTMAAKQPGTRFLKWSFGRGIRKNELTNAYTIQFIPDEQGMFMEWSFEGVTCHGLFKPESSVAIFNFCLQESLVTITYRILDANTMAVCIIDVDSEHTPTIQYGNMYR---IDPSK 161          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|301092149|ref|XP_002996935.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262112261|gb|EEY70313.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 150.214 bits (378), Expect = 4.390e-43
Identity = 72/152 (47.37%), Postives = 101/152 (66.45%), Query Frame = 0
Query:    7 YQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHMLRL 157
            Y VP GDF AYL G WKR LE R FG S++H R++N++V IE  +  A +P T FL W FGR+L+++DL   + + F+ D   T +EW FE   CHG F    +VA LNF   +   T+TYRV+D +TMAV IV+V+S+ + ++QYG+M R+
Sbjct:   14 YDVPNGDFCAYLKGFWKRNLEWRRFGASFKHLRSTNNIVFIEEDLDAAGQPNTQFLRWSFGRTLKQQDLSSAYTVQFIPDEQGTFMEWSFEGVTCHGVFKLEANVAILNFCLQESMVTITYRVLDANTMAVCIVDVDSEHTPTIQYGNMYRI 165          
BLAST of EWM28510.1 vs. NCBI_GenBank
Match: gi|813112811|ref|XP_012195292.1| (hypothetical protein SPRG_19096 [Saprolegnia parasitica CBS 223.65] >gi|641540494|gb|KDO34276.1| hypothetical protein SPRG_19096 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 149.443 bits (376), Expect = 8.648e-43
Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 0
Query:    1 MTATLVYQVPGGDFGAYLLGPWKRTLECREFGKSYEHQRTSNSVVVIEHAVGVAAEPPTYFLNWKFGRSLEEEDLKLGFCMHFMQDPDITNLEWRFEEHKCHGWFLPSISVATLNFRSYDRSTTVTYRVVDEDTMAVSIVEVESQRS-SVQYGHMLRLPVVDTSK 164
            M +   + VP  DF +YLLG WKRTLE R FG +++H RT+N+VV+IE     A +P T FL W FGR + + +L   + + F+ D   T +EW FE   CHG F P  SVA  NF   +   T+TYRV+D +TMAV IV+V+S  + ++QYG+M R   +D SK
Sbjct:    1 MNSATRFDVPDADFCSYLLGTWKRTLEWRNFGSTFKHLRTTNNVVLIEEDTLAAKQPNTRFLKWSFGRGIRKSELTNAYTIQFIPDEQGTFMEWSFEGVTCHGLFKPESSVAIFNFCLQESMVTITYRVLDANTMAVCIVDVDSDHAPTIQYGNMYR---IDPSK 162          
The following BLAST results are available for this feature:
BLAST of EWM28510.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110927|gb|EWM28510.1|6.650e-125100.00hypothetical protein Naga_100131g1 [Nannochloropsi... [more]
gi|698784063|ref|XP_009825075.1|2.750e-4548.08hypothetical protein H257_02934 [Aphanomyces astac... [more]
gi|673023908|ref|XP_008865915.1|3.398e-4547.44hypothetical protein H310_03723 [Aphanomyces invad... [more]
gi|669152724|ref|XP_008611924.1|8.903e-4546.67hypothetical protein SDRG_07846 [Saprolegnia dicli... [more]
gi|675186137|ref|XP_008901953.1|4.497e-4448.03hypothetical protein PPTG_08956, partial [Phytopht... [more]
gi|695401831|ref|XP_009522867.1|8.631e-4447.77hypothetical protein PHYSODRAFT_312938 [Phytophtho... [more]
gi|1173933929|gb|OQR85465.1|1.594e-4346.45hypothetical protein ACHHYP_11812 [Achlya hypogyna... [more]
gi|1173955627|gb|OQS02568.1|2.651e-4346.67hypothetical protein THRCLA_21388 [Thraustotheca c... [more]
gi|301092149|ref|XP_002996935.1|4.390e-4347.37conserved hypothetical protein [Phytophthora infes... [more]
gi|813112811|ref|XP_012195292.1|8.648e-4345.45hypothetical protein SPRG_19096 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2173rna2173Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications