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Properties
| Property Name | Value |
|---|
| Product | queuine trna-ribosyltransferase |
| Orig transcript id | gnl|cribi|Naga_100131g5.7458.mrna |
| Orig protein id | gnl|cribi|Naga_100131g5.7458 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:1060272..1061892 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2169 ID=rna2169|Name=rna2169|organism=Nannochloropsis gaditana|type=mRNA|length=693bp
ATGTATAACTTACATCCCGCGCGTAAAAGCACAGAACTTCGTACCTACTT
CGCTACCATGACCGCATCAAACGTAGCCCGCGCCATAGGCAAGCTGCAGC
CGAAGACCACAACTTTCCTGCTTTGCGATGTTCAAGAGCGGTTCCGCGAT
GTGATTTGGCACTTCCCCCAGGTAATCCGCACGGCCAAGTTCATGACGGC
AGTCGGTCAAGAGTTACAGATCCCTACCTTAGCCTCAGAGCAGTATCCCA
AAGCCTTTGGCGCCACGGTCCCCGAGCTGAAGGCTGCCGCCGTTGACTAC
TGCATCCCGACCTTTGAGAAGAAGATGTTCAGTATGCTTACCGACGAGTT
GAAGGCGCAAATGCAGTGTGAGCCTGAGCGCAAGACCGTGGTCTTGTTCG
GGATCGAGGCCCACGTCTGCGTGCAGCAAACCGCCCTGGACCTGCTAGAG
CAAGGTTACGCCGTGCACATTCTTGTGGACGGCGTCTCGTCCCAGAAAGC
GCATGACCGTGCGGTGGCCTTGCGCAGGATGGAAAAGGCAGGCGCATTTT
TGACGACGGCAGAGAGTTTAGTCTTTATGCTGATGCAAACTGCGTCGCAT
CCGCAGTTCAAGACAATTTCCTTTTTGATCAAGGAGCATGCCGGAGAACC
CAATCCCTTCAATGATTTATTGAAAGAAAATTCAGCGCTTTGA back to topprotein sequence of rna2169 >rna2169-protein ID=rna2169-protein|Name=rna2169|organism=Nannochloropsis gaditana|type=polypeptide|length=456bp
MVYLVFRVPCVARRYPLRVHRRTVYALKRCCTTNTPTAFEQTPLVLPKKV
KKRKVKVDPMTPPPAPDSFPVYERKDFFRFELLHRSSKEGSRARVGRLHT
PHGNVNTPGFVAVATNGALKAVDHDWGNQAGQELTFCNTYHLLLQPGPDV
IKACGGLHKFVNRNRPIITDSGGFQVFSLAHGSVFDELNMKSRSNRHRSE
TSSVLKISEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHP
YHIDSEALLRCVLRSHRWEARSLKEHLKDVRQQAMYAVIHGGVDPTLRKA
SCEYLTGLPFDGFAVGGALGKDRDELIEVLRVTMPHLPVDKPNHLLGIAD
EPSIWAGAALGVDTFDSCFPTRIARHGTLLTQQGPVYIRKQVHKEDLRPL
EEGCECFTCKRHSRAYLHHLYRAFEPLSATLLSIHNIAYMNGLMARIRAK
ILRNEL back to topmRNA from alignment at CM002458.1:1060272..1061892+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2169 ID=rna2169|Name=rna2169|organism=Nannochloropsis gaditana|type=mRNA|length=1621bp|location=Sequence derived from alignment at CM002458.1:1060272..1061892+ (Nannochloropsis gaditana)
CGTCCATGAGCTAATAAACATTTTTGTGTGGCGCCAAAAGCAGGAACAAT
CAAGGCTGCGGGAGTAAAACAGCTGATAGTCACGACATCGGAAGTATTTT
GGCCTTCAGTCCTCGTCTTTTTGGCTTTCTTTCACCGGTCAGTCTGCTAC
CACCACAAGACGCATACGTTGCCCTGTCCAACCCCGTGGTCCCCACAACA
TGGTGTATCTCGTATTTCGTGTGCCTTGTGTGGCAAGACGGTACCCTTTA
CGCGTCCATCGTCGCACGGTATATGCTTTGAAACGCTGCTGCACTACAAA
CACCCCGACGGCGTTTGAGCAAACCCCACTGGTCCTCCCTAAAAAGGTCA
AGAAGCGGAAAGTCAAAGTTGACCCGatgacccctcctcctgccccggaC
TCATTCCCCGTCTACGAACGCAAAGATTTCTTTCGATTCGAACTCTTACA
CCGATCCAGTAAGGAGGGATCGCGCGCACGGGTCGGGCGTTTACATACTC
CGCATGGCAATGTGAATACTCCAGGTTTCGTGGCAGTTGCGACCAATGGT
GCCCTAAAAGCCGTCGACCACGACTGGGGAAACCAAGCAGGCCAAGAACT
CACCTTCTGCAACACTTACCATCTGCTCCTACAGCCTGGCCCTGACGTCA
TCAAGGCTTGTGGTGGGCTTCACAAATTCGTCAACCGGAACCGTCCCATC
ATCACAGACAGTGGAGGCTTTCAGGTGTTTTCCCTCGCGCACGGCTCCGT
CTTCGATGAGCTAAATATGAAATCGCGCAGCAATCGACATCGATCAGAGA
CGTCGTCTGTTCTGAAAATAAGCGAAGAAGGCTGTCTTTTCCGATCTTAC
CGGGATGGCCGTAAGGTCCTCCTGACACCGGAATCGTCCGTACAAGCCCA
AAAAGCCTACGGGTCCGACATCATCATCCCCCTGGACGAGTTGCATCCAT
ACCACATCGACTCCGAGGCCCTTCTTCGCTGTGTCCTGCGTTCACATCGG
TGGGAGGCCCGGTCCCTTAAGGAGCATTTGAAAGACGTGCGACAACAAGC
CATGTACGCTGTTATTCACGGGGGCGTCGACCCTACCCTGCGCAAAGCCA
GCTGTGAGTACCTGACTGGACTTCCTTTCGATGGATTTGCAGTCGGAGGA
GCCTTGGGCAAGGACAGGGACGAGCTGATCGAGGTCCTGCGGGTGACTAT
GCCACATTTGCCCGTGGATAAGCCCAACCATTTGCTAGGGATCGCCGACG
AACCATCCATCTGGGCGGGTGCCGCCTTGGGGGTGGATACATTCGATTCC
TGTTTTCCCACGCGTATTGCACGTCATGGGACGCTCTTGACCCAGCAAGG
GCCTGTGTACATTCGGAAACAGGTGCACAAGGAGGATTTGCggccgctgg
aggagggttgTGAGTGCTTCACCTGCAAGAGACACAGTCGTGCATATTTG
CATCACCTTTACCGGGCATTTGAGCCCTTGAGCGCAACATTGCTTAGCAT
ACACAACATCGCATACATGAATGGGCTTATGGCGCGCATTCGAGCCAAGA
TTCTGCGCAATGAACTTTAACAAAGCTGCCTACAGCCACAAAATTCTGGA
AATTAGAGTGCTTCCCTCCAA back to topCoding sequence (CDS) from alignment at CM002458.1:1060272..1061892+ >rna2169 ID=rna2169|Name=rna2169|organism=Nannochloropsis gaditana|type=CDS|length=1371bp|location=Sequence derived from alignment at CM002458.1:1060272..1061892+ (Nannochloropsis gaditana)
ATGGTGTATCTCGTATTTCGTGTGCCTTGTGTGGCAAGACGGTACCCTTT
ACGCGTCCATCGTCGCACGGTATATGCTTTGAAACGCTGCTGCACTACAA
ACACCCCGACGGCGTTTGAGCAAACCCCACTGGTCCTCCCTAAAAAGGTC
AAGAAGCGGAAAGTCAAAGTTGACCCGatgacccctcctcctgccccgga
CTCATTCCCCGTCTACGAACGCAAAGATTTCTTTCGATTCGAACTCTTAC
ACCGATCCAGTAAGGAGGGATCGCGCGCACGGGTCGGGCGTTTACATACT
CCGCATGGCAATGTGAATACTCCAGGTTTCGTGGCAGTTGCGACCAATGG
TGCCCTAAAAGCCGTCGACCACGACTGGGGAAACCAAGCAGGCCAAGAAC
TCACCTTCTGCAACACTTACCATCTGCTCCTACAGCCTGGCCCTGACGTC
ATCAAGGCTTGTGGTGGGCTTCACAAATTCGTCAACCGGAACCGTCCCAT
CATCACAGACAGTGGAGGCTTTCAGGTGTTTTCCCTCGCGCACGGCTCCG
TCTTCGATGAGCTAAATATGAAATCGCGCAGCAATCGACATCGATCAGAG
ACGTCGTCTGTTCTGAAAATAAGCGAAGAAGGCTGTCTTTTCCGATCTTA
CCGGGATGGCCGTAAGGTCCTCCTGACACCGGAATCGTCCGTACAAGCCC
AAAAAGCCTACGGGTCCGACATCATCATCCCCCTGGACGAGTTGCATCCA
TACCACATCGACTCCGAGGCCCTTCTTCGCTGTGTCCTGCGTTCACATCG
GTGGGAGGCCCGGTCCCTTAAGGAGCATTTGAAAGACGTGCGACAACAAG
CCATGTACGCTGTTATTCACGGGGGCGTCGACCCTACCCTGCGCAAAGCC
AGCTGTGAGTACCTGACTGGACTTCCTTTCGATGGATTTGCAGTCGGAGG
AGCCTTGGGCAAGGACAGGGACGAGCTGATCGAGGTCCTGCGGGTGACTA
TGCCACATTTGCCCGTGGATAAGCCCAACCATTTGCTAGGGATCGCCGAC
GAACCATCCATCTGGGCGGGTGCCGCCTTGGGGGTGGATACATTCGATTC
CTGTTTTCCCACGCGTATTGCACGTCATGGGACGCTCTTGACCCAGCAAG
GGCCTGTGTACATTCGGAAACAGGTGCACAAGGAGGATTTGCggccgctg
gaggagggttgTGAGTGCTTCACCTGCAAGAGACACAGTCGTGCATATTT
GCATCACCTTTACCGGGCATTTGAGCCCTTGAGCGCAACATTGCTTAGCA
TACACAACATCGCATACATGAATGGGCTTATGGCGCGCATTCGAGCCAAG
ATTCTGCGCAATGAACTTTAA back to top
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