rna2166, rna2166 (mRNA) Nannochloropsis gaditana

Overview
Namerna2166
Unique Namerna2166
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1819
Alignment locationCM002458.1:1054912..1055658 -

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Properties
Property NameValue
ProductThiopurine S-methyltransferase
Orig transcript idgnl|cribi|Naga_100131g8.7460.mrna
Orig protein idgnl|cribi|Naga_100131g8.7460
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1054912..1055658 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100131g8gene2069Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28515.1cds2158Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2166rna2166-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2166 ID=rna2166|Name=rna2166|organism=Nannochloropsis gaditana|type=mRNA|length=1819bp
ATCGGGAAACTGCAATAAAATCTAGCATAAGTCCAAAACCCACCACCCTC
GCCACCGAACCGAAGATATGGCTGTCCTTGCCACGAGATTGCCTGTGTCC
ACGACGTGTATGAACGTGCCGCAGTGCCACCGTGTCCGACCTCCTCCTCT
TTTTCTGGGCTTATTTATTGTTATGGCTTTTTGCATGTCATGTTGACCCT
GTTCGTGGCCCTTCCCGTGCTACACAGAGGCCCCTCTACTTTGAATGAAA
TTTCTGCACATCTCGCATTTGTTTCCGTTGTCCCATATTACCACACTCAC
AAGCACAGGATTTTCTTTGAAGTAAGGATAGAAGTTTTTGGTCGAAAACG
CATGCGCTCTCTTCACCCATTGAATTGAAGGCTTCAAAGTTCCAACCTCA
AGGAATTGAGCACCCAACCGCACAGTCAAACATGGGTCTCCCGCACTTTC
ACAAAGACAACGACGTGCAACGAAGAAATGTTTGCAATGACAGCAGTCCC
AAAAGCAGTGGCAGTGGCAAGGAAGGGCGTGAAGTGGTCGGGAGCATGGC
CAAGGAGTTCCTGACTCAGTATTTGAGCAAATGGCTGGGCGTCCCTGGGA
GGAAAGATGGGAATCGGGCCCCGTCACTCCGGCACAGCTTCGTCTCGCTC
TTCCAAGCCACCCTGAGCATCTCCGTCCTGGCTTTCCTGGACATGGGCAT
GACCATCAGCGCGGAAGACTTCATGTTCCTGGTGGGATCCTTCGGTGCCA
CAGCCGTCCTCCTCTATTCCGCGCATGGCTCTCCTCTGGCCCAGCCCCGC
AACGTCATGGGGGGGCACTTCGTCTCCTCTTTGGCCGGTGTCACGGTGTA
CAAAGTGATTGGGAACGTCCCGTACCTGTCAGCAGGGCTGGCGGTAGGCT
TGGCTATTTTTTGCATGGAACGGACGAACACCCTCCACCCGCCGGGGGGT
GCCACAGCGCTTGTGGCGATCGTGGGAGGGGAGGCGGTGACGAGGGCGGG
GTATTGGTATGTGCTTTTCCCCTGTTGCACCGGGGCTTTCATGATGCTTG
TCGTCGCCCTAGTATGCAACAACATGGACCCGGAGCGGGTGTACCCGCAG
TACTGGAGCGACAACTTTCCCATCTGGCACACGTGTCGCCAGATACTCGG
AGGCAGATGTGGGGACTGCGGGAGGAAGGCCAACCGTGCTGAGGAGGAAG
AGGACTCGGCGTCCTCCCGCTCGACCTCGCCACGCCGGTATCCCCGCGTG
GCCTCCATCGAACTGGTGGACGATCTCGATGCGCCTGCAGAGACACCACC
AGGATCGCCCAGATGGAGAGCAGTGACCATGCCCAGCCCGGGCCATGCGT
CCACGAGGACAGGGGCGGGCGGTCATGTGGTAGACCCGGTCGTGCTGGAA
GAAGAGGATACTGCCTTTCCTGTGTAGCTTAATGTTCGCTTCTCGCGCAC
TCGGACGTGAGAGGGGGCCGGGGAAGCACGTATGACCATGTAATTGTTTC
ACTTCACAAAGTTTGCTTTTGGGGGGGGGGAAGAAAGCAAGTTGATCTGC
GCCGAAGAGCGATTTTCAGAGGTGTCTGCCTCTGCATAAATATTCTTTAA
AATCAAGTCACACTTGGCCCGATGTCAGCGTGTTGGACGCAGGTACTCAA
CAACTACAGTTATCATGAGAGCTCTAGTTTCTACTTTTACTTCTCAAGCG
TTTCGCTTCGGAAAAACCTTCCCTCCGATGCGATTCATGAGTTTGGCCAT
CTTTTCCGAAATGAGCGCTTATTTAAAAGTGTCACACCCTACGAGGAAAA
TAAAAGACAACGAGTGTCC
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protein sequence of rna2166

>rna2166-protein ID=rna2166-protein|Name=rna2166|organism=Nannochloropsis gaditana|type=polypeptide|length=248bp
MTGAGEAATQAHASKNSTGSPSGPPEQADQRHFWDTLWINEPMPRFDMRC
ASPCLIRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDL
SPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDY
TFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLE
IIRGLLEPMGFVAETLCLLPQELCHPGRDGTSGQWKATSGVGLWRLQK
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mRNA from alignment at CM002458.1:1054912..1055658-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2166 ID=rna2166|Name=rna2166|organism=Nannochloropsis gaditana|type=mRNA|length=747bp|location=Sequence derived from alignment at CM002458.1:1054912..1055658- (Nannochloropsis gaditana)
ATGACCGGCGCCGGGGAAGCCGCCACTCAAGCACACGCCAGCAAGAATAG
CACTGGATCGCCCTCGGGGCCACCGGAGCAAGCCGATCAACGCCATTTCT
GGGACACCTTGTGGATTAATGAACCCATGCCTCGGTTTGATATGCGGTGC
GCCTCCCCTTGCTTGATCCGTTACCTTGCCGAGGGGAAAATCCCTTTGAC
AGGCCGCGCTTTGGTGCCCGGATGTGGAAGAGGATACGATCTCCTTGCTT
TGGCAACGGCAGCCGGGGCGAAATGGTCCGAGGTGTTGGGGATGGACCTG
TCCCCAACAGGAGTGGCGGCTGCGCAAGCTTACATCAAAGAAGGCGAGGC
AGAGGAGGATAAAAAGAGGACATGCCGCGTGGAGCACAGTGATTTCTTTG
AATACACTTTGTCCACTTATGATGAAAAATTCAGCTTCATATACGACTAC
ACTTTTGCCTGTGCGATTCCGCCCCATTTGAGAGAAGCGTGGGCTCGTCA
AATGCGCGATCTGCTGGTCCCTGAAACTGGAGTGCTCATGACTCTCATCT
ATCCCATTTGCGAAAAAGATGGAGGTCCACCGTATCGTATGAGCCTGGAG
ATCATTCGAGGTTTATTGGAGCCCATGGGCTTTGTCGCGGAGACTCTCTG
CTTACTCCCACAGGAGTTATGCCATCCGGGCCGGGATGGAACTTCGGGGC
AATGGAAAGCAACGTCTGGAGTAGGTTTATGGCGGCTACAGAAATGA
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Coding sequence (CDS) from alignment at CM002458.1:1054912..1055658-

>rna2166 ID=rna2166|Name=rna2166|organism=Nannochloropsis gaditana|type=CDS|length=747bp|location=Sequence derived from alignment at CM002458.1:1054912..1055658- (Nannochloropsis gaditana)
ATGACCGGCGCCGGGGAAGCCGCCACTCAAGCACACGCCAGCAAGAATAG
CACTGGATCGCCCTCGGGGCCACCGGAGCAAGCCGATCAACGCCATTTCT
GGGACACCTTGTGGATTAATGAACCCATGCCTCGGTTTGATATGCGGTGC
GCCTCCCCTTGCTTGATCCGTTACCTTGCCGAGGGGAAAATCCCTTTGAC
AGGCCGCGCTTTGGTGCCCGGATGTGGAAGAGGATACGATCTCCTTGCTT
TGGCAACGGCAGCCGGGGCGAAATGGTCCGAGGTGTTGGGGATGGACCTG
TCCCCAACAGGAGTGGCGGCTGCGCAAGCTTACATCAAAGAAGGCGAGGC
AGAGGAGGATAAAAAGAGGACATGCCGCGTGGAGCACAGTGATTTCTTTG
AATACACTTTGTCCACTTATGATGAAAAATTCAGCTTCATATACGACTAC
ACTTTTGCCTGTGCGATTCCGCCCCATTTGAGAGAAGCGTGGGCTCGTCA
AATGCGCGATCTGCTGGTCCCTGAAACTGGAGTGCTCATGACTCTCATCT
ATCCCATTTGCGAAAAAGATGGAGGTCCACCGTATCGTATGAGCCTGGAG
ATCATTCGAGGTTTATTGGAGCCCATGGGCTTTGTCGCGGAGACTCTCTG
CTTACTCCCACAGGAGTTATGCCATCCGGGCCGGGATGGAACTTCGGGGC
AATGGAAAGCAACGTCTGGAGTAGGTTTATGGCGGCTACAGAAATGA
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Synonyms
Publications