EWM28515.1, cds2158 (CDS) Nannochloropsis gaditana

Overview
NameEWM28515.1
Unique Namecds2158
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:1054912..1055658 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28515.1
ProductThiopurine S-methyltransferase
Orig transcript idgnl|cribi|Naga_100131g8.7460.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:1054912..1055658 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0008757S-adenosylmethionine-dependent methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR008854TPMT
Homology
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|585110932|gb|EWM28515.1| (Thiopurine S-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 514.227 bits (1323), Expect = 0.000e+0
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
Query:    1 MTGAGEAATQAHASKNSTGSPSGPPEQADQRHFWDTLWINEPMPRFDMRCASPCLIRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTSGQWKATSGVGLWRLQK 248
            MTGAGEAATQAHASKNSTGSPSGPPEQADQRHFWDTLWINEPMPRFDMRCASPCLIRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTSGQWKATSGVGLWRLQK
Sbjct:    1 MTGAGEAATQAHASKNSTGSPSGPPEQADQRHFWDTLWINEPMPRFDMRCASPCLIRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTSGQWKATSGVGLWRLQK 248          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|514701057|ref|XP_004998096.1| (hypothetical protein PTSG_00628 [Salpingoeca rosetta] >gi|326430350|gb|EGD75920.1| hypothetical protein PTSG_00628 [Salpingoeca rosetta])

HSP 1 Score: 164.851 bits (416), Expect = 6.195e-47
Identity = 95/222 (42.79%), Postives = 132/222 (59.46%), Query Frame = 0
Query:   24 PPEQADQR------HFWDTLWIN--EPMPRFDMRCASPCLIRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTS--GQW 235
            P EQ D +        W+ +W +  EP  RFD R  +P L   L    +P  GRALVPGCGR Y  L  A        + LG+DL+ T V AAQ ++   E ++ K+    +  ++FFE      + +F  IYDYTF CA+ P+ RE WA QM  LL P+ G L+TLI+PI EK+GGPPY MS+++++ LLEP+GF A TL +LP ++CH GR+  +  G+W
Sbjct:   24 PEEQHDDKTRAGVSETWEQIWADGLEPGQRFDARGPAPILKHLLDTNALP-KGRALVPGCGRAYAPLEFARHG----YQTLGVDLAHTAVKAAQEFVDSVE-DKPKEGLLELRAANFFEL-----EGQFDVIYDYTFLCALHPNAREKWAAQMHKLLAPQ-GELVTLIFPIVEKEGGPPYAMSMDLVKSLLEPLGFTATTLEMLPDDMCHRGREERTALGRW 233          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|167533921|ref|XP_001748639.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163772880|gb|EDQ86526.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 157.532 bits (397), Expect = 8.105e-45
Identity = 89/193 (46.11%), Postives = 117/193 (60.62%), Query Frame = 0
Query:   56 IRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTSGQWKATSGVGLWRLQK 248
            ++ L EG +P  GRALVPGCGR Y ++A A           G+DLS T V  AQ  ++E  A    + T  V   +FFE T +     F  IYDYTF CA+ P  R AWA+Q + LL P  G L T+IYPI EK GGPP++MS+E+++ LLEP+GF A  L +LP ELCHPGR+G        + +GLW+L +
Sbjct:    1 MQVLKEGVLP-KGRALVPGCGRAYAVVAFAQHG----YTATGLDLSETAVEEAQQVLEENRASLQGEAT--VALGNFFETTGT-----FDVIYDYTFLCALHPDARAAWAQQHKKLLAP-GGTLFTMIYPITEKTGGPPFQMSIELVQSLLEPLGFKASRLEMLPDELCHPGREG-------KTAIGLWQLSE 173          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|167534726|ref|XP_001749038.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163772462|gb|EDQ86113.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 150.599 bits (379), Expect = 3.424e-41
Identity = 93/219 (42.47%), Postives = 123/219 (56.16%), Query Frame = 0
Query:   34 WDTLWIN--EPMPRFDMRCASPCLIRYLAEGKIPL--TGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGE-AEEDK--KRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTSGQWKATSGVGLWR 245
            W+T+W     P+ +FD     P L   LA+  +P     RALVPGCGRGYDL  LA         V G +LS T    A+ YI   E A  D     T  V   DFFE    T D+++  IYDYTF CA+ P   +AWARQMR LL P  G+L+T+I+PI +K+GGPP+ MS+E++ GLL+   F  + L +LP   C+ GR+G        + +GLWR
Sbjct:   38 WETVWQEGVRPLGKFDAGGPCPALEILLAQDDVPRHPEARALVPGCGRGYDLPVLARHG----FHVEGWELSETAAQVARDYINSQEHATPDAPLTGTMSVARMDFFE---PTSDQQYDLIYDYTFLCALHPDSHQAWARQMRALLRP-GGLLVTVIFPIVDKEGGPPFAMSMELVSGLLQGQNFECQHLAMLPDSSCNKGREG-------ITALGLWR 241          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|298708200|emb|CBJ30539.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 147.902 bits (372), Expect = 2.518e-40
Identity = 90/205 (43.90%), Postives = 119/205 (58.05%), Query Frame = 0
Query:   45 RFDMRCASPCLIRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVE-----------HSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTS--GQWK 236
            ++D    SP L + L EG +P TGRALVPGCGRGYD +A   ++     + +G+DLSPTGV  A+A + E E EED     R E             DFF+++    + KF  I DYTF CA+ P  R+ WA  M  LL PE G L+T+I+PI EK+GGPP+ +S  I+  LLEP G  A  L  L   LCH  R+G +  G+W+
Sbjct:   28 QWDTGVVSPALQKLLDEGVLP-TGRALVPGCGRGYDSIAFGKSS----YDSIGLDLSPTGVEQAKALLAE-EKEEDISGKARQELGKPLSVVEFRSGDFFKFS-PEQEGKFDVILDYTFLCALDPAARDDWADHMVSLLRPE-GELVTIIFPIVEKEGGPPFAVSESIVSDLLEPRGLKAIHLEKLEPSLCHKTREGKTALGRWR 224          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|873223819|emb|CEM27817.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 140.969 bits (354), Expect = 1.925e-38
Identity = 78/179 (43.58%), Postives = 109/179 (60.89%), Query Frame = 0
Query:   27 QADQRHFWDTLWIN--EPMPRFDMRCASPCLIRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIR 203
             A    FW++ W     P   +D    +P L++Y+A+G IP  G+ALVPGCGRGYD+ AL+  +     EV+G+D+S TG   A+ Y+K      D      +E +DFF Y   +    F FI+DYTF CAI P +R AWA+QM  LL  + G+LM  I+PIC+K+GGPP+ +SLE +R
Sbjct:    4 SAQDGAFWESNWQEGVAPGDEWDTSKPTPVLVKYVADGVIP-KGKALVPGCGRGYDVGALSDLS----REVIGLDISETGANVARDYLKG----LDLPGKWSIETADFFTYDRPS---SFDFIFDYTFLCAIQPDMRAAWAKQMHSLL-KDNGLLMVAIFPICDKEGGPPFALSLEGVR 169          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|551644384|ref|XP_005824983.1| (hypothetical protein GUITHDRAFT_154789 [Guillardia theta CCMP2712] >gi|428169066|gb|EKX38003.1| hypothetical protein GUITHDRAFT_154789 [Guillardia theta CCMP2712])

HSP 1 Score: 139.428 bits (350), Expect = 1.181e-36
Identity = 89/229 (38.86%), Postives = 124/229 (54.15%), Query Frame = 0
Query:   34 WDTLWINE----PMPRFDMRCASPCLIRYLAEGKIPL----TGR--ALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDK----KRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTSGQWKATSGVGLWRLQK 248
            WD +W  +    P   FD   +SP L+  + E K+       G+  ALVPGCGRGYD+   A          LG+D+SPT V AA+ +  E E +       K   +    DFF    +    KF  IYDYTF CAI P++R++WA +M+ LL P  G L+TLI+P+  ++GGPPY MS++++  LLEP GFV + L  +P+   H GR G          +G WRL+K
Sbjct:   52 WDDMWKRDGGLKPGQYFDACKSSPVLLELIQEWKVKYADYSNGKPDALVPGCGRGYDVCEFAKIG----FNGLGLDISPTAVKAAEEF-NESELKSAGVSAWKGDAKFSTDDFF----TLEGRKFDVIYDYTFLCAIEPNMRKSWAEKMKQLLKP-GGELVTLIFPLETREGGPPYAMSIDLVTNLLEPEGFVCDYLESVPEGKSHKGRGG-------KEALGRWRLKK 263          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|1129213867|gb|OLQ14719.1| (putative thiol methyltransferase 2 [Symbiodinium microadriaticum])

HSP 1 Score: 135.191 bits (339), Expect = 6.265e-35
Identity = 85/219 (38.81%), Postives = 122/219 (55.71%), Query Frame = 0
Query:   33 FWDTLWIN--EPMPRFDMRCASPCLIRYLAEGKIPLTG--RALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFVAETLCLLPQELCHPGRDGTSGQWKATSGVGLWRLQ 247
             W+++W     P   FD   ASP L   L    +      RALVPGCGR YD +ALA      +  V+ +DL+PT V AA+ ++K   +    K    V  +DFF++ L   + K   I+D TF CA+ P +R  WA++M+ LL P +G L+T I+PICEK+GGPP+ MS+ ++RGLLEP GF A  +    Q+    G     G + A + +G W L+
Sbjct:   70 MWESMWARGLRPKEAFDCGEASPTLTEVLRMKSLGDCAGKRALVPGCGRAYDAIALAEYG---FDSVVAIDLAPTAVDAARDFLKASSSPAASK--IEVACADFFKFEL---EPKADVIWDCTFLCALDPSVRTDWAKKMKALLNP-SGTLLTCIFPICEKEGGPPFAMSVPLVRGLLEPEGFEAAEVREDAQKHTAGG-----GAFSANTALGRWILK 274          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|971515428|dbj|GAQ82794.1| (thiol methyltransferase [Klebsormidium nitens])

HSP 1 Score: 130.568 bits (327), Expect = 1.395e-33
Identity = 75/190 (39.47%), Postives = 112/190 (58.95%), Query Frame = 0
Query:   23 GPPEQADQRHFWDTLWINEPMPRFDMRCASPCLIRYLAEGKIPLTGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLLEPMGFV 212
            G  E+ D    W+  W     P +DM   +P L + +A+G++P TGRALVPGCG GYD+LALA+        V+G+D+S T    A+   +  EA++          +DFF +     +  F  I+DYTF CA+ P LR+AWA++M  LL P  G L+TL++PI +  GGPP+ ++++I + +L P GFV
Sbjct:   27 GTNEKTDPGSGWEKSWQAGTTP-WDMGDVTPVLAQMIAKGEVP-TGRALVPGCGSGYDVLALASPE----RHVVGLDISRTANEKAK---RHQEAQQVPASQAEFVVADFFTWE---PEAPFDVIFDYTFFCALEPDLRQAWAQRMAQLLAP-AGQLITLVFPIDDHSGGPPFAVNMDIYKKMLVPAGFV 203          
BLAST of EWM28515.1 vs. NCBI_GenBank
Match: gi|552938504|gb|ESA21602.1| (hypothetical protein GLOINDRAFT_17281 [Rhizophagus irregularis DAOM 181602] >gi|595464268|gb|EXX64693.1| hypothetical protein RirG_140380 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 128.257 bits (321), Expect = 5.330e-33
Identity = 72/174 (41.38%), Postives = 101/174 (58.05%), Query Frame = 0
Query:   34 WDTLWINEPMPRFDMRCASPCLIRYLAEGKIPL-TGRALVPGCGRGYDLLALATAAGAKWSEVLGMDLSPTGVAAAQAYIKEGEAEEDKKRTCRVEHSDFFEYTLSTYDEKFSFIYDYTFACAIPPHLREAWARQMRDLLVPETGVLMTLIYPICEKDGGPPYRMSLEIIRGLL 206
            WDTLW  +  P +D   +SP L + + E K PL  GR LVPGCG+G+D+  L++        V G+D+S T +   Q   KE    + K      +  +FF+  L+  +EK+ FIYDYTF CAIPPHLR  WA +M + L+   G+L+ L++PI     GPPY +S EI + LL
Sbjct:   16 WDTLWQKDITP-WDFGDSSPALKQLIEEKKFPLPEGRGLVPGCGKGFDVYYLSSEK----RHVTGLDISQTLIDQVQKEQKELNVPDSK---VTFQQGNFFD--LNPPEEKYQFIYDYTFMCAIPPHLRPKWASKMAE-LISSGGILIALMFPISNHTDGPPYALSTEIYQELL 178          
The following BLAST results are available for this feature:
BLAST of EWM28515.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585110932|gb|EWM28515.1|0.000e+0100.00Thiopurine S-methyltransferase [Nannochloropsis ga... [more]
gi|514701057|ref|XP_004998096.1|6.195e-4742.79hypothetical protein PTSG_00628 [Salpingoeca roset... [more]
gi|167533921|ref|XP_001748639.1|8.105e-4546.11hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|167534726|ref|XP_001749038.1|3.424e-4142.47hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|298708200|emb|CBJ30539.1|2.518e-4043.90conserved unknown protein [Ectocarpus siliculosus][more]
gi|873223819|emb|CEM27817.1|1.925e-3843.58unnamed protein product [Vitrella brassicaformis C... [more]
gi|551644384|ref|XP_005824983.1|1.181e-3638.86hypothetical protein GUITHDRAFT_154789 [Guillardia... [more]
gi|1129213867|gb|OLQ14719.1|6.265e-3538.81putative thiol methyltransferase 2 [Symbiodinium m... [more]
gi|971515428|dbj|GAQ82794.1|1.395e-3339.47thiol methyltransferase [Klebsormidium nitens][more]
gi|552938504|gb|ESA21602.1|5.330e-3341.38hypothetical protein GLOINDRAFT_17281 [Rhizophagus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2166rna2166Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications