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Properties
| Property Name | Value |
|---|
| Product | histone-like transcription factor family protein |
| Orig transcript id | gnl|cribi|Naga_100009g27.663.mrna |
| Orig protein id | gnl|cribi|Naga_100009g27.663 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:956117..957285 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2134 ID=rna2134|Name=rna2134|organism=Nannochloropsis gaditana|type=mRNA|length=4621bp
CGAACACAATTTTCAGGTGATAGGATGGCTAGTCTCACTTTTAATTCTAC
CGTGGATGGTGGAGGCTATGAAAGTACAAAAGAGAGCATCAAAGAGGCAT
CGTCACCACCCTTTTCTACCTCCTCCTCTTTTGCCGAAGCGCTCTCATCG
TATTGCAATGCCGGTGACGCTGCTGCTGCAAGTAATGGAGAAGGGGAAGC
AGTGCCTCCAAATGTCACATCGCCAGATGCCACGGTTGCGCATCTGAACA
CAATTCTCCTTCACGTGCAGCGAAGTAAGCGCTTTGAGGATCTAGTAGCC
GAGATGGGGCCCTATCTCACTAACGAGGCAGCGTCGGTTCGCACGCGGTC
TGCCACTTTGTTGGGGGAAGTGCTTTATCGTCTCCCGAGTCTCCCGCTCA
CTGACGCGGCCGTGCACCACTATGTGGAATTTTTTTCGAGCCGTCTGGAG
GATTTCCCGTCCGTCGCAGGGAGTTTGTTGGGCATCCGCGCCTTGCTGCA
GCACCACAAAGAACCTGCGCAAAAGGAAGCAGGCATAATAGCGCGTGGCT
TATTCAAGCATCTGTATGTGCCTTCCATGACACAGACCATCCGACAACGG
ACTTTCGAGGTCGTGTTCGAAATGATAGGAGCTCTGAACGGGGCTGAGGA
CACGGAGGGTGAGTGCAATGCCACGACCAGCGGCGCCGCCGTGCCCGCCA
GTCTGTTGGACATGCAGGACGAATTTGTGACGGGGGTGATCGAGTGCATA
GAGGGCGAGAAGGATCCGCGCTGTTTGATCCTGTGCTTGAATATCATCAG
CAGGGTGCAGGTCATCTTCCCGGCGGCCTCGGACGCACACATCGAGGCCC
TCTTTGACATCACGGCCTGCTACTTTCCCATTACCTTCACCCCTCCCCCC
AATGATCCCTATGGAATAACCCCCGATGTGCTGAGCCACGCCTTGCGCGA
GGCTCTGACCCGGCGCCCGTCCATGGCTGAGTTCTTGCTGCCTCTGCTCG
TAGACAAGCTCACATCCACCCATGTCCCCGCCAAACTGGAGGCCCTGCTC
ACGCTGCAGGTGGCAACACGAACCATCGGCATGCGGGCAATGCTAGGTAA
CCTCGCCTCCGTCACAGGGGCCTTGTTCCAGGAGATTGTATCGTGCGCGG
AAGCTCCGGTGGTGGCAGCGGCCTTGGAGACCTGTCGTTCCCTGGCCGCA
CATTTATCCTGCCTCGAGGACGCCGGCAGGGGGACTACGGGGGGCAAGCC
GCGAAGCAAGGCCTATGCCAATCCACGCGAATCGAAGGAAGGGGAAGGGA
GCGGACGGTCGGAAAAAGCCGGGGCGGGCGAAGGTGGCCGGGCTCAGAAC
AAAGGGGGGGACCGGGCGGACGCGGAGATGGAGAAAGCCTGGCAAACAGT
TCTGGTCAATATCGTGGGTAAGGCAGCTAGCGAGGTAAAGGCTAATCCTG
ACTCCATGAAAGGGCGCGCTAGTGCCCGAGTCCTAGGGGCGGTAGCGCGG
GCGTCCGCCCGAGCTTACGCGGCTGTCCTCAAAGCGATCGTCCCGGGGGC
CCTGCAACTGGCCACGGAGGGCAAGAAGGCCAAGCCAGGACGGATGGTAG
TGGAAGGGGAGGGGGAACGACAGGAGGCAGCCTTGCTCTTGTTGGTTGAT
CTCGTGGAAGCAGTCGATCCAGACCTGGACTTCACCGCCAGTGCCCACGG
CCCCCCCCTGGCGCCGTACGTTCCTCTCCTACACGGGAGGTTTCTTGCCT
GTCTCAACTCACCGGCCTCGGGCCCCGCCCTCCTGGCAGTGAAAGGACTG
GCTTCTCTCGCCACTCGCTCTCCTTCGCAGCTTTTGACTTCCGCCCAAGC
CTCTGAGCTGGTTGTACTTTTCACGCACCGGATCCAAGCGGAGGAGCGAT
CTGTGGGTCCCGCCTACGATCGCAACCTGGATCAGGCGCTGTTAGAGGCC
TTGAAGGTCCTCAGCGCCCGGCGGCAGGAACTCAGGGCAACAGTTGTTGA
GCATACCGTACCGGAGCTTTTGAGGTGGCTGGACGAGGCAGCAGCCGGAA
GAGGCGTTTCAGGTTCGACAGCGCATGGGAAGGAGAATGGAAATGGAAGG
GCGGACTTGGACTCGAAAGACGTGGGCCAGAGCAGTCGCCCTAGCAGGAA
AGAGGGCGTGAGTGCTGGTCGAATCGATGACAGTACTGTTGTAAACAAAG
GCAAATGCAACGTGGAGTGCGGGATCAATTCTCTGGAGCTAGATCGATGT
TTGGGTGCCCTGGCATTTCTGGCGGACCAGACAGAAATCTTCGAGGCGGT
GTTGCCGTCCCTGTTGGCTCGTGTGTTAGTTGCGCAGAACATGTCAGACA
CGGCCGAGGACAAGCACAGGAACGATATGGGTGGTTGGACGTCGTGGACC
CTCCGAACTGAGGAGGAGGCCAGGCACATTTTGTCATCGCTGGCCGCCAT
CCTTGTACGCACCAGCGCCATTAATCAGGCAGCTTTACCAGGGCTTTTGG
GCCTACCTGAGCTAGCCAGCTCTAAAAAAGCGGAGCCAGGGCAAGTGGAA
GCTATGGATGTGCAGGAGTCATTGCTACCTGTCGCAACGGAGAGAGGCCC
TTGGCTGTGGTGGTTATTGACGGGTGTGCTCGGATCGGCTGCAGCTGGAA
AGATCTTGGATGACGCTGCTCTAGACGCAATAGTGCGTATGATGAGCGCC
GTTACTGAGGCCTTGTCCCGTAGGTCGCAAGATCTTCTGACAGAACGGCT
TCTTCGTTTCTTCTTCCCTTTCCCTCCCTCATCTTCTCCGGCTGCCCCCT
TTGTGCGTACCTCCACCAGCACTCCCTCCCGCTTTGGTATTGTAGATCCA
GACCCTCCAGACGCAGCGACCTTTTCAATTCCTGGATTCCAACCCCTGGA
TCCGTCTTCTCATCGGTCTCAAGGGCAAGCTGTGACCATCCTGCTTACAG
TACTCAACTCGCTACATGTAGACTCCACGATATTTGATTCATTGGGTCTG
GAGCAGGACCTGCTTCCCGCCCTTGTCAACCTCACGCTGCTAGATGCAGA
GGGACTGGGAGTGGTGGAACACCGCACCGAGAGTACCAGCATTGCCTCGG
TTAATGATAGCCGTGCCCATCCTCCATTGGCCAGTGAAGGGCCAGCGCCG
GCCTCGTGGGGCGTGGCTCTCATTGCCAACAAGGCCGCGAAGCCCAGGTT
CGTGGAGGTCTTTGTCGCACCGCTTTTATCTCAACTTCGGCAACGCCTCG
CAGCGGAGGAGAGAAAGAGTCACAGCAGCACGGAGAGTCTGGCCACGGCC
ACGAGAGATGTGTCATCAGTCGTGTGGCTGGCCAAGGCTTTGGCCCTCCG
GTGCGTCCCGAAGGGTGCTTTGGAAGACGCCATCTCTTTGCTCATTGACG
TAGCAGGCTGTACAATGTTAGAGGGAAAGCAAGTTCCAGAGAAGAACAAG
ATTGCGGAAGAAGCAACTCCGGCTCGCCTGGTGTTGGCTCGCCGAGCAAG
CGAAGGCTTCGGGCTTATCCTGCGTGATTCTTCCTTGACAGAGGGAACAG
CCCGGGAATGCCTGCCTTCCTTCTCGTCCTTGACGACCTTTTCTTGTCCT
ATCCCGCTGGCGAATCAACTCCTGACGGCACGTCTCAACACTGCTCGCGT
CAATCCTTTATGGCGACAGCGTCTCTACAACGTTTCCTTTACGCGATTGC
GGGAGGCGGTGGAGCGACATCGCGCAAATCCTCAGGCACAAAGTGCCGCC
CTGCTGGCACTCTGTAACATGCTTGGGTCGCTTCCCCCGCCGATCATACA
GCAAGACATGGAGCCTATCATCCGAGTGGTCTTGCAGGGCATGTCTTGTG
TCGCCACGCGTGGCAAGGGAGAGGGCGCCGACGACGACAAGGACACAGAA
GAGGAAGCCGCGGCGGTCCTCCGAGCGCGTGCCACGGAGACGTTCGTCGC
TTTGGCGAAGGAATCTTTGGATGCGGTCATGCCCCACCTGAGCACCGTGA
TCCCTCTCCTCTGCAAGCTCTGTACACTTGCCGACCCTCATTTCTTGCCC
ACAGCCCGGTTGCGCGTTCTGGCTCTGGGTAGTCTCTTGGAAATAACTCG
CCTGCCGTACGCAAAGCTACATCCTTATCGGACGTCGGTTTCACGGGGAC
TGCTGGCTCCTCTGGACGATCGGAAACGAGTGGTGAGGCAGATGGCTGTC
AAGGTGCGCAATGAGTGGCTGGTCATGGACAGGTAAGAGGAAGGGGATAT
GTAAATCGAGACCACGAAGATGGTAGAAATGAAGTGGTACTCGTGAGGGA
ACCCATACGGCGAACCCTCATGTTTTGCGTGTAAAAGTAGAGTCTCAATA
GAAAAAATCAAATCTTGTCTGGTGTAGTTTTGAACATGTTTCTTTACATG
CCGTGTCACCGTCATTAATGCGTTTTTAATGTATTGGCCCCGCATATTGC
AAAGTATATATATACATATAATATGTGTATGCATTGGAATTTCAAAATAT
AGACATTGGTTGAGTAAAAGTGGTCAAGCCTAAAAAAAGGCCTGCTAGGT
TCAGCTCATGCAACACGGTTAAAACTTGAGAGAGATCACGCAAGCATCAC
CAAAGAAAAATGATAAATACA back to topprotein sequence of rna2134 >rna2134-protein ID=rna2134-protein|Name=rna2134|organism=Nannochloropsis gaditana|type=polypeptide|length=199bp
MRLYRQIKKASMSRSPEVLQTSNSALSYASPSQAPSGAAIMMPTAPALPG
RSTNTPNTPTGTEERKRDTPEGPKPSPLAGTPASMKAEEAPVSSKKARNA
PIPPLSTSNAYVTEDTTLAIPRASIKRIMKLDPDTKQLSQDAIMVMAKAT
ELFIDKLAKASHSMAVTNKRKTIKYEDIADARFSQKNMEFLDGVVPQIP back to topmRNA from alignment at CM002458.1:956117..957285+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2134 ID=rna2134|Name=rna2134|organism=Nannochloropsis gaditana|type=mRNA|length=1169bp|location=Sequence derived from alignment at CM002458.1:956117..957285+ (Nannochloropsis gaditana)
TGACCGCCTTTTCTACGTGGATGACGCGAGGTAGACTGTACACATTGAGT
GGGGAGCTGCATGTCCTGGCTGCGCCATCTCACCGCGAGCAGGCTTCCCC
GAAGAGGCGAGGCGATGTGGTCGTCATTCTCGCTAACAGCCGAAAAGCTG
TAGCTCTTAGGGAGTGCCTGAAGAAGGGTaggtggaagagagaaagTACC
TCCGTTTTGTTCCCGACCTGTGCTACTTGACCCAATCTGCCGCATCGTAT
TAGGCTACATCTTTGTTAAATGTCGAGGCGCAAATTTGTAGTGATTTTGA
GGAAAGGCCATTGAGAAGATAAGGTAGACGAAGTTGTGATAATCGAAATT
AGGATTTTACAGCGTTCGTAATCATGCGTCTTTACAGGCAAATAAAAAAG
GCATCAATGTCGCGCTCACCAGAAGTCCTGCAAACGTCGAACTCAGCCCT
GTCTTATGCTTCACCTTCGCAAGCACCTTCAGGGGCGGCAATCATGATGC
CTACTGCTCCGGCATTGCCCGGAAGATCAACGAACACCCCAAATACGCCG
ACAGGCACCGAGGAGCGCAAGCGTGACACACCTGAAGGGCCAAAACCTTC
CCCGCTTGCAGGCACGCCCGCATCTATGAAAGCAGAGGAGGCACCTGTTT
CGTCGAAGAAAGCAAGGAATGCTCCGATTCCACCACTATCAACATCGAAT
GCTTACGTGACAGAGGACACCACGCTGGCAATACCAAGGGCGTCAATAAA
GCGAATTATGAAGCTCGATCCGGACACAAAGCAATTGTCCCAAGATGCTA
TTATGGTGATGGCAAAAGCCACAGAGTTGTTCATCGACAAGCTAGCGAAG
GCCTCGCATTCGATGGCCGTCACCAACAAACGAAAAACAATAAAGTACGA
GGACATTGCCGATGCGCGCTTTTCTCAGAAAAACATGGAGTTCTTGGACG
GTGTGGTTCCTCAAATTCCatagaaaagaaggaggcgagggcggatGCAG
CACAGCTTGTAAATAAAAAGCGAGGAATGTCACAACCAAGTACCCTTGCA
TTAGTCATTTGAGGCTCCATTGGCTCAATATTTTTTTCTATTTTCAAAGG
GCTCTTTCATCGTTGCACCAATCATGACAGACTCAAAAACTGCACGCATC
ACGCTTTGTACACACAATG back to topCoding sequence (CDS) from alignment at CM002458.1:956117..957285+ >rna2134 ID=rna2134|Name=rna2134|organism=Nannochloropsis gaditana|type=CDS|length=600bp|location=Sequence derived from alignment at CM002458.1:956117..957285+ (Nannochloropsis gaditana)
ATGCGTCTTTACAGGCAAATAAAAAAGGCATCAATGTCGCGCTCACCAGA
AGTCCTGCAAACGTCGAACTCAGCCCTGTCTTATGCTTCACCTTCGCAAG
CACCTTCAGGGGCGGCAATCATGATGCCTACTGCTCCGGCATTGCCCGGA
AGATCAACGAACACCCCAAATACGCCGACAGGCACCGAGGAGCGCAAGCG
TGACACACCTGAAGGGCCAAAACCTTCCCCGCTTGCAGGCACGCCCGCAT
CTATGAAAGCAGAGGAGGCACCTGTTTCGTCGAAGAAAGCAAGGAATGCT
CCGATTCCACCACTATCAACATCGAATGCTTACGTGACAGAGGACACCAC
GCTGGCAATACCAAGGGCGTCAATAAAGCGAATTATGAAGCTCGATCCGG
ACACAAAGCAATTGTCCCAAGATGCTATTATGGTGATGGCAAAAGCCACA
GAGTTGTTCATCGACAAGCTAGCGAAGGCCTCGCATTCGATGGCCGTCAC
CAACAAACGAAAAACAATAAAGTACGAGGACATTGCCGATGCGCGCTTTT
CTCAGAAAAACATGGAGTTCTTGGACGGTGTGGTTCCTCAAATTCCatag back to top
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