rna2129, rna2129 (mRNA) Nannochloropsis gaditana

Overview
Namerna2129
Unique Namerna2129
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1266
Alignment locationCM002458.1:947080..947289 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g32.581.mrna
Orig protein idgnl|cribi|Naga_100009g32.581
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:947080..947289 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100009g32gene2033Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28538.1cds2121Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2129rna2129-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2129 ID=rna2129|Name=rna2129|organism=Nannochloropsis gaditana|type=mRNA|length=1266bp
ATGGAAAATTACGAGGATAGTCCTGAAGTCCTCCATAAGACGCCAATTGA
TATTGCCAGCAGCCTTGTTGAAGTTATTGAATCTCTGCATTCCACCCCCA
TAGCAAAAGCTCAAAGTAAGTGGACTGATGAAGCCTCGGACATGCATGAA
GTGGGTTGTGCCTCAAGTTTTCTGAGCGAGCTATCCATAGAGCAGCGTTT
TTCTGGCTTTCGCGCTTTGGCGCAATTCAAACAGAATGCAAGTCAAGTAC
AAACTACATCCTCGTTGCCGTCTTCTCGAGACGTGCCAGCTGTAGCCACG
CTTTGCCGACATCTGGCTTTTATAATACTACGCCCGGATCTTAGGAGCGA
AGATATCGCGAGCGAGTACTCGAGCATGGTGACGGTGACTGAAAACGAAA
CAGCGACCGGGGGTGGGGAGGACCCCAAGCTCGATCGCTTCTATCTCAGG
CAACTTGAGGATATGGCCCGGGAGGAAATGCATAAAGCACTGGATGGGAC
AATACAGCAGCTGGAAGACTACGTACTGGAGAAGGAAAAACAATGTCTCC
AGCTCAAAGAATTTCTGATGCCCATGTTTACACTGTACAAACTAGCCGAG
CCCCCAGGACTGAATGAACCTTTACCGTTGTCATACTATCCTCTGAATCT
TCTGGCAGCCTGCAATCAGTCAGCAAGGAGCGAAGAAGAATCATTTGCAG
ATAAATCGGACCATGAAAATGTCTGGGCGGAGAACCAGCGTCCTCATAGG
TCCGGAAGCCTCGACAAGGTCACCTACATGGATGCGCTAAGGGACAGGGC
CTGGCGACACAACGTAATGCAATGCGACGCGGAGATGACTGCTTGCATGC
AAAGGAAGAACTTGCAAATCGTGGATCGAATGGGCAGGTGCAACGAATAT
CAGCTGTTCCTGCTTGAGACTCTCCGCGATAACCCCTTCAGGACAACAGT
TCCTTTGTTTCACAACTTCAAGTATCAGATAGGCCATGACGGAGGGGTCT
TTGAAGATGAAGAGGTGGAGACCCCATTGTACTACTGCCGATGTATCGTA
GGGTCTCGTCCAGCGACTCTCTTTATAACTTTTACACAAATCACATTCGT
CAGTAAAGTGTGTGGATTTGTTTGGGCACGTCGCCTGCCTTTGGACAGGA
TTACTTCTCATGGCATGACTTATATGCATCTTGGCGTTAAACGTGCGAAA
GCCATAGCGCTCAAGGTGAGGAGTCACTGGTTTTCAGCACGATGGTCGAC
CCGGAAAATTTGCTAA
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protein sequence of rna2129

>rna2129-protein ID=rna2129-protein|Name=rna2129|organism=Nannochloropsis gaditana|type=polypeptide|length=69bp
MCGNNILEFSAHGIHWNIQLNVHKVTNQKCYLCTKGDLKHCSRCIFWEAL
FELLLRRNTQPVCDFACLC
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mRNA from alignment at CM002458.1:947080..947289-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2129 ID=rna2129|Name=rna2129|organism=Nannochloropsis gaditana|type=mRNA|length=210bp|location=Sequence derived from alignment at CM002458.1:947080..947289- (Nannochloropsis gaditana)
ATGTGCGGCAACAATATCTTAGAATTTAGCGCTCATGGCATACATTGGAA
TATACAACTTAACGTTCATAAAGTGACAAACCAAAAGTGTTATCTGTGTA
CTAAGGGTGACCTCAAGCATTGCTCTCGATGCATTTTTTGGGAAGCGCTT
TTCGAGCTTCTGCTGAGGAGGAATACCCAACCTGTATGTGACTTTGCATG
TCTTTGTTAA
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Coding sequence (CDS) from alignment at CM002458.1:947080..947289-

>rna2129 ID=rna2129|Name=rna2129|organism=Nannochloropsis gaditana|type=CDS|length=210bp|location=Sequence derived from alignment at CM002458.1:947080..947289- (Nannochloropsis gaditana)
ATGTGCGGCAACAATATCTTAGAATTTAGCGCTCATGGCATACATTGGAA
TATACAACTTAACGTTCATAAAGTGACAAACCAAAAGTGTTATCTGTGTA
CTAAGGGTGACCTCAAGCATTGCTCTCGATGCATTTTTTGGGAAGCGCTT
TTCGAGCTTCTGCTGAGGAGGAATACCCAACCTGTATGTGACTTTGCATG
TCTTTGTTAA
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Synonyms
Publications