EWM28538.1, cds2121 (CDS) Nannochloropsis gaditana

Overview
NameEWM28538.1
Unique Namecds2121
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:947080..947289 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM28538.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100009g32.581.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:947080..947289 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM28538.1 vs. NCBI_GenBank
Match: gi|585110956|gb|EWM28538.1| (hypothetical protein Naga_100009g32 [Nannochloropsis gaditana])

HSP 1 Score: 145.206 bits (365), Expect = 3.513e-44
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 
Query:    1 MCGNNILEFSAHGIHWNIQLNVHKVTNQKCYLCTKGDLKHCSRCIFWEALFELLLRRNTQPVCDFACLC 69
            MCGNNILEFSAHGIHWNIQLNVHKVTNQKCYLCTKGDLKHCSRCIFWEALFELLLRRNTQPVCDFACLC
Sbjct:    1 MCGNNILEFSAHGIHWNIQLNVHKVTNQKCYLCTKGDLKHCSRCIFWEALFELLLRRNTQPVCDFACLC 69
The following BLAST results are available for this feature:
BLAST of EWM28538.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585110956|gb|EWM28538.1|3.513e-44100.00hypothetical protein Naga_100009g32 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna2129rna2129Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications