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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100009g33.568.mrna |
| Orig protein id | gnl|cribi|Naga_100009g33.568 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:945243..947055 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2128 ID=rna2128|Name=rna2128|organism=Nannochloropsis gaditana|type=mRNA|length=2382bp
CGACGCGACAGGTGACCGCAAACAGCACACACGTGCGGAGACAGTCTCAT
TGTCATTGTGTTTGCCTCTGTAGGAGCAGCTTAAATTCGTGGGCACGGGT
CAGTAAAGGACTTTCGGTGATATTTTCGTTTCCCCCTGAGAACGTTGTGG
ACAGTGTCCATGTTACCCTCTTCGCTTCCTCGATCTGACCGCTTAATAAT
GTACTAAATTGCATCAAAACTTACCGTGCAGCTTGTCTATGACCGCTCCG
CCTCAAGCAGTCAAAATTTTACTGCGTAGTAAGGCTGGGGTGCACCTTCA
GGAGCTTACCACTGGAGAAAATGGTCTACCCGTCCTCACACCAGCACCCG
ACGAAGCCCTTGGCAAGCCTGTGCCTGGGGACTTGACTGAGTTTTGCGGG
GATGGCAGTGCCGTGGCTATAGTAACCTCGACTCCAACTAAAAGTTTACG
AGTTGTTGACGTGGAGACGGGAAACGTGCGGTGGACCGTCGAAGGACGGA
ATATTCAAGCACTATCCTTTTCCCCCCAGGGAACCTTCCTCCTCACCTGG
GAGCGTCTGGCTTCAGGGGGCGCACCGCAGCCAGGCAGTAGTACTGCAAC
CAGTCAAAGTGGCAGCACGGCACACACTACTCCTGAGACTGCCACTGCCG
GTATTAAGGGTAATTTACTGGTGTGGCGTTCAGAAAACGGTGTACTAGTG
GCCGGTTTCACGCAAAAAACCTTCCGTAAACCTGAATGGCCCACTTTGCA
ATGGACACCGGATGAGAGCCTGTGTTTCCGCGCCACTGCCACTGATGTTC
ATGTCTATCCTGGGCAAGAGCCAGGGACGGCTTCTCCAGAAAAGTTTGCG
GTGTCCGGGGGAGGGATGGCTTCCCTCCGCGTCAGTCCCAACGCCTCCCC
GCCTCATCGTGTGGCCTGTTTCTTTCCGGAAGCCAAAGGTAAACCCGCCT
CCGTCCGCATCTATCAATATCCGCATTTTGGGGTGGCTTTAGCGTCCAAA
AGCTTCTTCAAGGCCCAAGAAGCCCACCTGCGCTGGTCTCCCAACGGGCT
AGCCGTCCTGATCCACACACACACGGATGTGGACACCTCGGGCGTGTCTT
ACTATGGATCTACAGGCCTCTACCTGCTACATGCGGATGGAAAATACGAG
GTCACGGTGCCTTTACCCAAGGAGGGCCCGATCTCTGATGCGAAGTGGGC
GCCAGCGGGGCCGGCGCAATTTATTGTCTTGGCCGGGCGGATGCCGGCAG
CCGCCACGTTGTACAACATCAAGGCGGAGCCAATCTTTGAATTCGGTCAA
GCACATCGCAACACCGTCAGTTTCAGCCCGCACGGACGTTTCGTTGTGCT
AGCAGGGTTTGGTAATTTGGCCGGCGAAATGGACTTCTGGGACCGGAACA
AGCAGAAGCTCATGGGCAGGAACACGTCACATTGCAGTGTGGGCTATGGA
TGGAGTCCCTGCGGTCGTTACTTTATGACGGCCACTTTGGCGCCCCGTAT
GAATGTGGATAACGCCGTGAAGCTCTTCAAGTACAATGGAGCAGGGCCTC
TGCACAAGGCAGAATTTGAGGATGCGACTTTGTTCGACGCCAGCTTCAGG
CCAGCGGCAGGGGGAGTGTTCCCCGACCGACCCGCGACACCGCCTCGCAA
GGGAATGGAGGGGGATAGCTCAACGACGGTGCCACCACCTTCGAAGCCAA
AAACTGCGTATCGACCACCGGGCTCCACTGGGGCACTGGCTGCGTTGATT
CGTGCGGAGCGCGATGCCTTGTCGGGACCGAAAAAAGTGGCCGCAGGGAA
AGGTGGAGGTAATAGTGCATATGGTGCACCCGGACAGCCTTACATACCCG
GCCTAGCGCCAGCGGGAGCGACAACAAATGGAGAGAGCAAAAATACTGCG
AGAAACAAGGCGCGGAAGGAGAAGAAAAAGGCAGCTGAGCAAGCATTGAG
GGCACAGGCCGAAGCTGAGGCGGAGAGGATAAGGAAAGAACAAGCAGCTG
CAGCTCTTGTAGCAGCGGAAGATCCAGTCAAGAGAAGGAAAGCTGTCCAG
AAGAAGCTCAAGCAGATAGAGGAATTGAAGGCCCGGGCAATGGGTGGGGA
AAAGTTGAACGATGATCAGCAAAACAAGTTGGCTACAGAGGCGTCTCTAG
TCGAAGAGCTTGCCAAGCTCGAGGTATAATGGCGGTGGTAATCGCGCCAG
TAGAAAAAAGTAATCAAAAGGGTACCAAGGAATTAATTGAATAGGTTTTA
CTTGGCGTTATTATTTTCTAAGCTATGATCTTTGACTTGAACAAAAGCGG
TAAAAAGGCAGGAAAGAAAGGGTCTCTAGAGGCACGGCAAACACGGCGAA
ATTACTCAGCTGGTGGACAATCAGAAATTTGA back to topprotein sequence of rna2128 >rna2128-protein ID=rna2128-protein|Name=rna2128|organism=Nannochloropsis gaditana|type=polypeptide|length=421bp
MENYEDSPEVLHKTPIDIASSLVEVIESLHSTPIAKAQSKWTDEASDMHE
VGCASSFLSELSIEQRFSGFRALAQFKQNASQVQTTSSLPSSRDVPAVAT
LCRHLAFIILRPDLRSEDIASEYSSMVTVTENETATGGGEDPKLDRFYLR
QLEDMAREEMHKALDGTIQQLEDYVLEKEKQCLQLKEFLMPMFTLYKLAE
PPGLNEPLPLSYYPLNLLAACNQSARSEEESFADKSDHENVWAENQRPHR
SGSLDKVTYMDALRDRAWRHNVMQCDAEMTACMQRKNLQIVDRMGRCNEY
QLFLLETLRDNPFRTTVPLFHNFKYQIGHDGGVFEDEEVETPLYYCRCIV
GSRPATLFITFTQITFVSKVCGFVWARRLPLDRITSHGMTYMHLGVKRAK
AIALKVRSHWFSARWSTRKIC back to topmRNA from alignment at CM002458.1:945243..947055+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2128 ID=rna2128|Name=rna2128|organism=Nannochloropsis gaditana|type=mRNA|length=1813bp|location=Sequence derived from alignment at CM002458.1:945243..947055+ (Nannochloropsis gaditana)
ATGGAAAATTACGAGGATAGTCCTGAAGTCCTCCATAAGACGCCAATTGA
TATTGCCAGCAGCCTTGTTGAAGTTATTGAATCTCTGCATTCCACCCCCA
TAGCAAAAGCTCAAAGTAAGTGGACTGATGAAGCCTCGGACATGCATGAA
GTGGGTTGTGCCTCAAGTTTTCTGAGCGAGCTATCCATAGAGCAGCGTTT
TTCTGGCTTTCGCGCTTTGGCGCAATTCAAACAGAATGCAAGTCAAGTAC
AAACTACATCCTCGTTGCCGTCTTCTCGAGACGTGCCAGCTGTAGCCACG
CTTTGCCGACATCTGGCTTTTATAATACTACGCCCGGATCTGTCTTGCGG
TCAGGTCCTTGAGTTGGTGCTCGAAGTCCTTCGAGACGAGGGACTCGTAG
TGGTTGTACGTCAAGGCTTTCAAATCGTTGCAGATGCAGAACGGGTTGCA
AATGACGAAAGTAAAAGAAATTCGGGGGATAAGCGTACAGAATGGAAGTT
CGCGGACATTCAGGTCGTCGTCGACCGCCAGAGTAAGGACCGAGTTTTGC
TGGTGCGGTTTATCATCCCCAGTAGAAGCGGAGAGGATGGCTCTGGAACC
ACCAGCTGGAGAGGCGCGACAAATTTTTGTGGCGTGAAGAGACCGcatgc
aggaggagaaaaaattTGTCCCAAAACGCGAAGTTTTTTGGCGGCGCTGG
AGTCAAAAATATTTGGCGCCGCTTTCAATAAACGGGCGCTGTGCCGGAGA
CCATTTTCTGTTTCGAATCTTAATACTGATTGCAGTAGGAGCGAAGATAT
CGCGAGCGAGTACTCGAGCATGGTGACGGTGACTGAAAACGAAACAGCGa
ccgggggtggggaggaccCCAAGCTCGATCGCTTCTATCTCAGGCAACTT
GAGGATATGGCCCGGGAGGAAATGCATAAAGCACTGGATGGGACAATACA
GCAGCTGGAAGACTACGtactggagaaggaaaaacaaTGTCTCCAGCTCA
AAGAATTTCTGATGCCCATGTTTACACTGTACAAACTAGCCGAGCCCCCA
GGACTGAATGAACCTTTACCGTTGTCATACTATCCTCTGAATCTTCTGGC
AGCCTGCAATCAGTCAGCAAGGAGCGAAGAAGAATCATTTGCAGATAAAT
CGGACCATGAAAATGTCTGGGCGGAGAACCAGCGTCCTCATAGGTCCGGA
AGCCTCGACAAGGTCACCTACATGGATGCGCTAAGGGACAGGGCCTGGCG
ACACAACGTAATGCAATGCGACGCGGAGATGACTGCTTGCATGCAAAGGA
AGAACTTGCAAATCGTGGATCGAATGGGCAGGTGCAACGAATATCAGCTG
TTCCTGCTTGAGACTCTCCGCGATAACCCCTTCAGGACAACAGTTCCTTT
GTTTCACAACTTCAAGTATCAGATAGGCCATGACGGAGGGGTCtttgaag
atgaagaggtggagacCCCATTGTACTACTGCCGATGTATCGTAGGGTCT
CGTCCAGCGACTCTCTTTATAACTTTTACACAAATCACATTCGTCAGTAA
AGTGTGTGGATTTGTTTGGGCACGTCGCCTGCCTTTGGACAGGATTACTT
CTCATGGCATGACTTATATGCATCTTGGCGTTAAACGTGCGAAAGCCATA
GCGCTCAAGGGTCAGGCATCGAAGATCGCATCACCCTTGATAAAGGATGA
AAATTGTGGAATGCCCCTTCTAGAAAGTAAAAGCCACGGCGTGGCTGCCA
ATGATAGCATTAGTGAGGAGTCACTGGTTTTCAGCACGATGGTCGACCCG
GAAAATTTGCTAA back to topCoding sequence (CDS) from alignment at CM002458.1:945243..947055+ >rna2128 ID=rna2128|Name=rna2128|organism=Nannochloropsis gaditana|type=CDS|length=3798bp|location=Sequence derived from alignment at CM002458.1:945243..947055+ (Nannochloropsis gaditana)
ATGGAAAATTACGAGGATAGTCCTGAAGTCCTCCATAAGACGCCAATTGA
TATTGCCAGCAGCCTTGTTGAAGTTATTGAATCTCTGCATTCCACCCCCA
TAGCAAAAGCTCAAAGTAAGTGGACTGATGAAGCCTCGGACATGCATGAA
GTGGGTTGTGCCTCAAGTTTTCTGAGCGAGCTATCCATAGAGCAGCGTTT
TTCTGGCTTTCGCGCTTTGGCGCAATTCAAACAGAATGCAAGTCAAGTAC
AAACTACATCCTCGTTGCCGTCTTCTCGAGACGTGCCAGCTGTAGCCACG
CTTTGCCGACATCTGGCTTTTATAATACTACGCCCGGATCTTAGGAGCGA
AGATATCGCGAGCGAGTACTCGAGCATGGTGACGGTGACTGAAAACGAAA
CAGCGaccgggggtggggaggaccCCAAGCTCGATCGCTTCTATCTCAGG
CAACTTGAGGATATGGCCCGGGAGGAAATGCATAAAGCACTGGATGGGAC
AATACAGCAGCTGGAAGACTACGtactggagaaggaaaaacaaTGTCTCC
AGCTCAAAGAATTTCTGATGCCCATGTTTACACTGTACAAACTAGCCGAG
CCCCCAGGACTGAATGAACCTTTACCGTTGTCATACTATCCTCTGAATCT
TCTGGCAGCCTGCAATCAGTCAGCAAGGAGCGAAGAAGAATCATTTGCAG
ATAAATCGGACCATGAAAATGTCTGGGCGGAGAACCAGCGTCCTCATAGG
TCCGGAAGCCTCGACAAGGTCACCTACATGGATGCGCTAAGGGACAGGGC
CTGGCGACACAACGTAATGCAATGCGACGCGGAGATGACTGCTTGCATGC
AAAGGAAGAACTTGCAAATCGTGGATCGAATGGGCAGGTGCAACGAATAT
CAGCTGTTCCTGCTTGAGACTCTCCGCGATAACCCCTTCAGGACAACAGT
TCCTTTGTTTCACAACTTCAAGTATCAGATAGGCCATGACGGAGGGGTCt
ttgaagatgaagaggtggagacCCCATTGTACTACTGCCGATGTATCGTA
GGGTCTCGTCCAGCGACTCTCTTTATAACTTTTACACAAATCACATTCGT
CAGTAAAGTGTGTGGATTTGTTTGGGCACGTCGCCTGCCTTTGGACAGGA
TTACTTCTCATGGCATGACTTATATGCATCTTGGCGTTAAACGTGCGAAA
GCCATAGCGCTCAAGGTGAGGAGTCACTGGTTTTCAGCACGATGGTCGAC
CCGGAAAATTTGCTAAATGGAAAATTACGAGGATAGTCCTGAAGTCCTCC
ATAAGACGCCAATTGATATTGCCAGCAGCCTTGTTGAAGTTATTGAATCT
CTGCATTCCACCCCCATAGCAAAAGCTCAAAGTAAGTGGACTGATGAAGC
CTCGGACATGCATGAAGTGGGTTGTGCCTCAAGTTTTCTGAGCGAGCTAT
CCATAGAGCAGCGTTTTTCTGGCTTTCGCGCTTTGGCGCAATTCAAACAG
AATGCAAGTCAAGTACAAACTACATCCTCGTTGCCGTCTTCTCGAGACGT
GCCAGCTGTAGCCACGCTTTGCCGACATCTGGCTTTTATAATACTACGCC
CGGATCTTAGGAGCGAAGATATCGCGAGCGAGTACTCGAGCATGGTGACG
GTGACTGAAAACGAAACAGCGaccgggggtggggaggaccCCAAGCTCGA
TCGCTTCTATCTCAGGCAACTTGAGGATATGGCCCGGGAGGAAATGCATA
AAGCACTGGATGGGACAATACAGCAGCTGGAAGACTACGtactggagaag
gaaaaacaaTGTCTCCAGCTCAAAGAATTTCTGATGCCCATGTTTACACT
GTACAAACTAGCCGAGCCCCCAGGACTGAATGAACCTTTACCGTTGTCAT
ACTATCCTCTGAATCTTCTGGCAGCCTGCAATCAGTCAGCAAGGAGCGAA
GAAGAATCATTTGCAGATAAATCGGACCATGAAAATGTCTGGGCGGAGAA
CCAGCGTCCTCATAGGTCCGGAAGCCTCGACAAGGTCACCTACATGGATG
CGCTAAGGGACAGGGCCTGGCGACACAACGTAATGCAATGCGACGCGGAG
ATGACTGCTTGCATGCAAAGGAAGAACTTGCAAATCGTGGATCGAATGGG
CAGGTGCAACGAATATCAGCTGTTCCTGCTTGAGACTCTCCGCGATAACC
CCTTCAGGACAACAGTTCCTTTGTTTCACAACTTCAAGTATCAGATAGGC
CATGACGGAGGGGTCtttgaagatgaagaggtggagacCCCATTGTACTA
CTGCCGATGTATCGTAGGGTCTCGTCCAGCGACTCTCTTTATAACTTTTA
CACAAATCACATTCGTCAGTAAAGTGTGTGGATTTGTTTGGGCACGTCGC
CTGCCTTTGGACAGGATTACTTCTCATGGCATGACTTATATGCATCTTGG
CGTTAAACGTGCGAAAGCCATAGCGCTCAAGGTGAGGAGTCACTGGTTTT
CAGCACGATGGTCGACCCGGAAAATTTGCTAAATGGAAAATTACGAGGAT
AGTCCTGAAGTCCTCCATAAGACGCCAATTGATATTGCCAGCAGCCTTGT
TGAAGTTATTGAATCTCTGCATTCCACCCCCATAGCAAAAGCTCAAAGTA
AGTGGACTGATGAAGCCTCGGACATGCATGAAGTGGGTTGTGCCTCAAGT
TTTCTGAGCGAGCTATCCATAGAGCAGCGTTTTTCTGGCTTTCGCGCTTT
GGCGCAATTCAAACAGAATGCAAGTCAAGTACAAACTACATCCTCGTTGC
CGTCTTCTCGAGACGTGCCAGCTGTAGCCACGCTTTGCCGACATCTGGCT
TTTATAATACTACGCCCGGATCTTAGGAGCGAAGATATCGCGAGCGAGTA
CTCGAGCATGGTGACGGTGACTGAAAACGAAACAGCGaccgggggtgggg
aggaccCCAAGCTCGATCGCTTCTATCTCAGGCAACTTGAGGATATGGCC
CGGGAGGAAATGCATAAAGCACTGGATGGGACAATACAGCAGCTGGAAGA
CTACGtactggagaaggaaaaacaaTGTCTCCAGCTCAAAGAATTTCTGA
TGCCCATGTTTACACTGTACAAACTAGCCGAGCCCCCAGGACTGAATGAA
CCTTTACCGTTGTCATACTATCCTCTGAATCTTCTGGCAGCCTGCAATCA
GTCAGCAAGGAGCGAAGAAGAATCATTTGCAGATAAATCGGACCATGAAA
ATGTCTGGGCGGAGAACCAGCGTCCTCATAGGTCCGGAAGCCTCGACAAG
GTCACCTACATGGATGCGCTAAGGGACAGGGCCTGGCGACACAACGTAAT
GCAATGCGACGCGGAGATGACTGCTTGCATGCAAAGGAAGAACTTGCAAA
TCGTGGATCGAATGGGCAGGTGCAACGAATATCAGCTGTTCCTGCTTGAG
ACTCTCCGCGATAACCCCTTCAGGACAACAGTTCCTTTGTTTCACAACTT
CAAGTATCAGATAGGCCATGACGGAGGGGTCtttgaagatgaagaggtgg
agacCCCATTGTACTACTGCCGATGTATCGTAGGGTCTCGTCCAGCGACT
CTCTTTATAACTTTTACACAAATCACATTCGTCAGTAAAGTGTGTGGATT
TGTTTGGGCACGTCGCCTGCCTTTGGACAGGATTACTTCTCATGGCATGA
CTTATATGCATCTTGGCGTTAAACGTGCGAAAGCCATAGCGCTCAAGGTG
AGGAGTCACTGGTTTTCAGCACGATGGTCGACCCGGAAAATTTGCTAA back to top
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