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Properties
| Property Name | Value |
|---|
| Product | tpr domain-containing protein |
| Orig transcript id | gnl|cribi|Naga_100009g50.641.mrna |
| Orig protein id | gnl|cribi|Naga_100009g50.641 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:911314..912912 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2110 ID=rna2110|Name=rna2110|organism=Nannochloropsis gaditana|type=mRNA|length=2208bp
ATGAGGTATTATCCCCCACCGTACGCCTTCTTTTTTACCGCTTTTATTCC
TGAGAAAGAGGAAGTGAGAAATCATTCGGAGTGTTCGACAAGCTGCGCAG
CATGCCAAGGGCCTAAGCGAGCGGCGTTCATGGGTTCCGACAACACAAGG
AGAGCACAAATATCAGCTTCATCGTTTCCCCCACTCGCTTCGATAGTAGA
CGCGCACAGATCTAACGCGGTCCTCGTTATATCGTGGGCGTTTTTCTCTC
TGTTGGTCATGAGTACTTCTCCATCGGACGGGGCTTCAGTACCTCGCGGC
AAACCGGCAAGCTCAAACATGCTCTTCCTCCGTCACATTCCACAAGCGTC
TTCTGAGATTTCAGAGGCTGGCCTTTCCATGTCCACCTCCCAGCATAACC
AGCAATCGCATTATCGGTCCTACACCGCTGCGGGAAGCAATCGATTTAAC
TACCACGGCGGGCAAGGAGGATATCAACAGGGCCAAAGCCATCCTACCCT
GAACGAAGACACGGAAGACATCAGCAAGAGCAAGCCTTTGAATGGGAGAA
ACGGGTGGATAAATCTTGCGCGAGACTATATCAGACGGACGCTTGAGGTG
GTGTGGACGCCGGGATCCCAAAGGTCGGGAGTAAGCGGTGGCAGTAGTAG
CACTAACAGCGCCAGTAGCTCTTACCTGCGATGGCGACGAGCGACACAGG
ACCTGCTGGGATTGGGAGGGAATGCCGGTGCTGCGAATACGATGGGAGGC
GGGACTCGACATTATAAAGTACACCACTCCCACAATTCTTTCCAGCCGCC
GCCGCAGCCCCGCCATGCCCGCCACCTGCTCGCTCCTAGGGGCCAGGGTC
TTCATCCCGGGAAGGTCGGGTCTCTTCTTTTGGCCGCGCACCCAACTTCG
GGGGAGGCCGGCAGCGCTGGCTTTGATGGAGGAATGCTGGGAGGTAGGGA
TGAGGAGGGTGGGAAGCCGCACCATAGGATTGGGTCCAGTGCGCTGGACA
GGATTAGCATCAACATGACGCTGGAAGCGAATCTGCGGGAGGGAGTGGGG
GGCCAGCTCCGGAGGGATTGTCCTGTGGAATTGATCGCTCCCTGCGCGGT
CCCATCGGCCTCGTTAGTCGAGCACAACGTGCTGCGGGAAGAGGGCTTGG
TGGTGCCAGCCTCCTTCCTAGTCGGCGACGTGGTCGACTTCATTACCCGG
ATGAGCAAACTGGAACGGTACAATGGCGGGCCGGGAGATGGCAGAGAGGC
GGAAGGGGGGGGCGGAGGCCCCTGTCGGTCTTTGGAACGTATATTCGTGA
CGGACTGCGGACGGTTGGTGGGCTACGTGACCTCGATGGACCTGCTCGTG
CAGGACAGGGCGGCGCCGCTCCTTTCGATCGTGCGATCGTGCGAGGTGGT
GGTCCGGGACTCGGACGAGTACGACGATGCCATCGGTGCCATGCGGGCGA
AGCGTTTGACTTACGCCCCGGTGGTGACGGAGGACGAGGTGGTGGTGGGG
ATTATCACGCCCTCGGACATGCTGAAGGAGATGGAGATGGAGGCGACGGA
CGACGTCTCGCGCTACTCGGGGAGTGGGAGCACAGAGAGCTTCTTCGGGA
CGCCGGTCTTGCAATTGGTCACAGCCCGCGCCTCCTGGCTGGTCTCCTTG
CTCATGTTGCAGAGCCTCTCCTCCATCATCCTCACGCACTTCTCGGCCCT
CATCGAGCGGCACCTGGTCATTGCCCTCTTCTTGACCATGCTCACCGGCA
CGGCGGGCAATGCGGGGAACCAGAGCTCCGCCATGGTCATCCGGGGCATT
GCCACGGGGGAGATCAACCGAAAGAACGGGTGGAAGGCGGTGGTCCGGGA
AGTGAAGGCGGCGTTGCTGATGTCGGCCCTCTTGGCGGTGGCCGCTTTCC
TTCGAGTCTACATCACTCCGGGGAGCACGGTCATGTCCACTGTGGCCGTT
ACCCTCGCCTTGTCCGTGACGGTGGCTGGGCGTGGATCCCGCCAATTGTG
CCTCCCCGGCGCTCTCCACCTTAGTGGACGTGGGGGGCGTGCTGGTCTTG
TGTGCTCTGTCGAGTGCCATGTTGGGCTGAGTGGCTTCCCGGTAATGAGA
ACGTCAAGTCGAGGAGGACATGAGAAGGGTAGAAGGCATGTGAGTCAAGG
TTCGAGGAAGGCTCGGTCCCTCGACAGCTTTTGCATGTGTACAGAAGGAG
GGAATTAA back to topprotein sequence of rna2110 >rna2110-protein ID=rna2110-protein|Name=rna2110|organism=Nannochloropsis gaditana|type=polypeptide|length=332bp
MRQRLRLLHTMSSVSSMGEAATLLNRAMLNTACGRFEDALCLLDDVLGMA
SAETTSVEEARMQARAAKVKGTVLQEMGLMKEASVWYELSVRAGRRLLQQ
APLSEDLRKYFPSLRYVHNQLAQFYLSVRAFALVLEHFEQLVALTDDAGH
RRLLLREFERLSLEHDFWQDVTPGMLDQELEQGRRWYREKCWEEAALQFR
RVVQLARLASFSSGDGTRMVEARALGNYATVLKDLRRCDESILAYRLCCR
LLEELEEEQMERRMLNGLSLSLIEAHRYEDAAVVCERLLVLTERDDNVEL
VKTRLEEIQACLRDGRRTMERESVDEGNEETR back to topmRNA from alignment at CM002458.1:911314..912912+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2110 ID=rna2110|Name=rna2110|organism=Nannochloropsis gaditana|type=mRNA|length=1599bp|location=Sequence derived from alignment at CM002458.1:911314..912912+ (Nannochloropsis gaditana)
CGGCCAGGGGCGTGGGCGCAGGTCGAggttgaggaaaggagaggatcgga
acgaggaggcggtgcaAGACCCTCTTGCGTCAACCGTCTGTTCCCCCGCG
GAGGACTTCGTGGTCAAGGGTGAAGgattcggggggggggggagagtgTG
AAgaacggggagggggggaggtactATGGttggaaggacggggaggggga
tgaatACGAGGATGATTTAGACAGTCAGACGACGCGcggctcccttcccc
aagaGCAAGCGCAACGACGTCATTTCTCAaagggacctggaggagaggat
agTCTTGTGGAAGatgaggatgggggggaggaggaggggggaaatgagga
aggggaggaggaggaggaggacgaggacgaggacgaggacgaggacgagg
aggaggaggagggggacgaggaggacgaggaggacgaggaggaggaggac
gaggaagaagaagaagaagaagaggcggaaaGAGAGACGCACGAGCCCTC
CGAGATTGAGATGCGCCAGCGCCTTCGGCTCCTGCACACCATGTCCTCAG
TGTCCTCGATGGGCGAAGCCGCAACGCTCCTCAACCGCGCCATGCTGAAC
ACGGCGTGTGGGAGGTTCGAGGAcgccctctgcctcctcgacGACGTGCT
GGGGATGGCAAGCGCTGAGACCacgagcgtggaggaggcgaggatgCAGG
CGCGCGCGGCGAAGGTGAAAGGTACCGTGCTGCAAGAGATGGGTCTCATG
AAGGAGGCCAGCGTCTGGTACGAGCTCAGCGTCCGGGCAGGGCGGCGACT
CCTCCAGCAGGCACCCCTTTCCGAGGACTTGCGCAAGTATTTCCCGTCCC
TTCGCTACGTGCACAACCAACTCGCGCAGTTTTATTTGTCCGTGCGGGCC
TTTGCCCTGGTACTGGAGCACTTTGAGCAGCTGGTGGCCTTGACGGACGA
CGCGGGGCACCGACGCCTCCTTCTGCGGGAATTCGAGCGCCTTTCCCTCG
AGCACGATTTCTGGCAAGACGTGACGCCCGGCATGCTCGACCAGGAGCTG
GAGCAAGGGCGCAGGTGGTACAGGGAGAAATGCTGGGAAGAAGCGGCGCT
CCAATTTCGCCGGGTCGTGCAATTGGCACGCCtggcgtccttttcctcgg
gGGATGGGACACGGATGGTCGAGGCCCGGGCCCTGGGGAACTATGCCACG
GTACTCAAGGACTTGCGGAGGTGCGACGAGTCCATCCTCGCTTACCGGCT
CTGCTGTCGGCttctggaggagctggaggaggagcaaatgGAGCGGCGCA
TGCTGAATGGCTTGTCTTTGTCCCTGATCGAAGCGCACAGGTACGAGGAC
GCCGCCGTGGTCTGTGAGCGGCTTTTGGTGCTGACGGAACGGGACGACAA
TGTGGAGCTTGTCAAAACCAGGTTGGAAGAGATACAGGCGTGCCTGCGAG
ACGGGAGGCggacgatggagagggaaagtgtGGATGAGGGGAACGAAGAG
ACGAGGTGAGGGCCCCGTGGGGGCCAGAAACACGCCTTTAATGTGACAGG
TCGTATCGAGTAACCAATTTAACAAATAAAGTGCCGCATTATTCGAGTC back to topCoding sequence (CDS) from alignment at CM002458.1:911314..912912+ >rna2110 ID=rna2110|Name=rna2110|organism=Nannochloropsis gaditana|type=CDS|length=999bp|location=Sequence derived from alignment at CM002458.1:911314..912912+ (Nannochloropsis gaditana)
ATGCGCCAGCGCCTTCGGCTCCTGCACACCATGTCCTCAGTGTCCTCGAT
GGGCGAAGCCGCAACGCTCCTCAACCGCGCCATGCTGAACACGGCGTGTG
GGAGGTTCGAGGAcgccctctgcctcctcgacGACGTGCTGGGGATGGCA
AGCGCTGAGACCacgagcgtggaggaggcgaggatgCAGGCGCGCGCGGC
GAAGGTGAAAGGTACCGTGCTGCAAGAGATGGGTCTCATGAAGGAGGCCA
GCGTCTGGTACGAGCTCAGCGTCCGGGCAGGGCGGCGACTCCTCCAGCAG
GCACCCCTTTCCGAGGACTTGCGCAAGTATTTCCCGTCCCTTCGCTACGT
GCACAACCAACTCGCGCAGTTTTATTTGTCCGTGCGGGCCTTTGCCCTGG
TACTGGAGCACTTTGAGCAGCTGGTGGCCTTGACGGACGACGCGGGGCAC
CGACGCCTCCTTCTGCGGGAATTCGAGCGCCTTTCCCTCGAGCACGATTT
CTGGCAAGACGTGACGCCCGGCATGCTCGACCAGGAGCTGGAGCAAGGGC
GCAGGTGGTACAGGGAGAAATGCTGGGAAGAAGCGGCGCTCCAATTTCGC
CGGGTCGTGCAATTGGCACGCCtggcgtccttttcctcgggGGATGGGAC
ACGGATGGTCGAGGCCCGGGCCCTGGGGAACTATGCCACGGTACTCAAGG
ACTTGCGGAGGTGCGACGAGTCCATCCTCGCTTACCGGCTCTGCTGTCGG
CttctggaggagctggaggaggagcaaatgGAGCGGCGCATGCTGAATGG
CTTGTCTTTGTCCCTGATCGAAGCGCACAGGTACGAGGACGCCGCCGTGG
TCTGTGAGCGGCTTTTGGTGCTGACGGAACGGGACGACAATGTGGAGCTT
GTCAAAACCAGGTTGGAAGAGATACAGGCGTGCCTGCGAGACGGGAGGCg
gacgatggagagggaaagtgtGGATGAGGGGAACGAAGAGACGAGGTGA back to top
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