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Properties
| Property Name | Value |
|---|
| Product | translation initiation factor eif-5a |
| Orig transcript id | gnl|cribi|Naga_100009g63.637.mrna |
| Orig protein id | gnl|cribi|Naga_100009g63.637 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:878839..879588 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2097 ID=rna2097|Name=rna2097|organism=Nannochloropsis gaditana|type=mRNA|length=483bp
ATGGACCCTCACAAAAGCAATCAGGAACAGCATAAAGGCGGTTGTACACA
CGTTTCAACGTGTTTTTCTCTAGTTTATCTTGGAACGTTTGGTTGGATAA
GGGGCTGTGTAGGGGGCTGGGATTGCGTTGCTTGTTTGACGACAGAAGTG
GGAACGAGAAGCGTGTCAAATGTGGGCCAGCGTGCTTGTGTGTGCGGAAA
AGGGTGTCGTGGAGGGTCACGACTGCGAAGTCGCTTGTTTAGGGGCAGGG
TGGGTGGTTCATGTTTGGAGGTGTGTCTTCAGGGGTCGGAAGGGAAGAAG
ACAGAAATAAAAGGAGGGGAAATATGGCGAATGGATGGGCGCAACCATCA
GCCTAGAAGCAATCCTCACAACGGATGGGGGGAGAGTACAAACACCGTCC
AACGCCACGGTCATCCGGGGCGGATGCTCTTTATCGTACGGTTCTTTCTT
TCTCCTCTTTCCCTTTCGGACCCTTTTTGTTAA back to topprotein sequence of rna2097 >rna2097-protein ID=rna2097-protein|Name=rna2097|organism=Nannochloropsis gaditana|type=polypeptide|length=162bp
MAEEAAATIEDYDFSGTTAGASDVFPSEAGQIKKGGYIMIKGRPCKVVNV
STSKTGKHGHAKANFTAIDIFNGKKVEDVVPTTHTTYVPNVNRSEYQLLD
IEDGFVSLLQEDGGTRDDLKLPDYPEGFDQEILKAYQDGKSLSVSVLSAC
GIDQIIAYKEEA back to topmRNA from alignment at CM002458.1:878839..879588- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2097 ID=rna2097|Name=rna2097|organism=Nannochloropsis gaditana|type=mRNA|length=750bp|location=Sequence derived from alignment at CM002458.1:878839..879588- (Nannochloropsis gaditana)
ATGGCTGAGGAAGCTGCTGCGACTATCGAGGATTACGACTTCTCGGGAAC
GACGGCAGGGGCTTCGGACGTGTTCCCTTCCGAAGCCGGGCAGATCAAGA
AAGGTGGCTACATCATGATCAAGGGCCGTCCGTGCAAGGTGGTGAATGTC
TCGACCTCCAAGACGGGGAAGCACGGGCACGCCAAGGCAAATTTTACGGC
CATCGACATCTTCAATGGGAAGAAGGTGGAAGACGTGGTGCCTACCACAC
ACACCACGTATGTGCCCAACGTGAACCGCTCTGAGTACCAGCTCCTGGAC
ATCGAGGACGGCTTTGTCTCGCTCCTGCAGGAGGACGGCGGGACGCGCGA
CGACTTGAAGCTTCCGGACTACCCCGAGGGCTTCGACCAGGAAATCTTGA
AGGCCTACCAGGACGGCAAATCCCTCTCCGTCTCCGTCCTTTCCGCCTGC
GGCATTGACCAGATCATTGCGTACAAGGTGGGCCGAAGAGGAAAGAGAGG
GCGGGAGGACAAGGGGGACCCAAGACGGATTTCGTCCGGTCAAAGCGCGG
ATTATTGGGGTTGCACTGAGGATGTGCTTGAGTACTGCATGCTTTCAACC
GCCAGTGGTGGATTGTACGGCATCGTGAGAGTGTTGAGAAGTCAATAGGG
GAAGTTGTGGAGGGTGGAAAATAAATTATGGCGTTTTGTCATTCCCCATA
TTTTTCCCCATCAATCTCTTCCATTCTCTTATTTGCAGGAGGAAGCGTAA
back to topCoding sequence (CDS) from alignment at CM002458.1:878839..879588- >rna2097 ID=rna2097|Name=rna2097|organism=Nannochloropsis gaditana|type=CDS|length=978bp|location=Sequence derived from alignment at CM002458.1:878839..879588- (Nannochloropsis gaditana)
GAGGAAGCGTAAATGGCTGAGGAAGCTGCTGCGACTATCGAGGATTACGA
CTTCTCGGGAACGACGGCAGGGGCTTCGGACGTGTTCCCTTCCGAAGCCG
GGCAGATCAAGAAAGGTGGCTACATCATGATCAAGGGCCGTCCGTGCAAG
GTGGTGAATGTCTCGACCTCCAAGACGGGGAAGCACGGGCACGCCAAGGC
AAATTTTACGGCCATCGACATCTTCAATGGGAAGAAGGTGGAAGACGTGG
TGCCTACCACACACACCACGTATGTGCCCAACGTGAACCGCTCTGAGTAC
CAGCTCCTGGACATCGAGGACGGCTTTGTCTCGCTCCTGCAGGAGGACGG
CGGGACGCGCGACGACTTGAAGCTTCCGGACTACCCCGAGGGCTTCGACC
AGGAAATCTTGAAGGCCTACCAGGACGGCAAATCCCTCTCCGTCTCCGTC
CTTTCCGCCTGCGGCATTGACCAGATCATTGCGTACAAGGAGGAAGCGTA
AATGGCTGAGGAAGCTGCTGCGACTATCGAGGATTACGACTTCTCGGGAA
CGACGGCAGGGGCTTCGGACGTGTTCCCTTCCGAAGCCGGGCAGATCAAG
AAAGGTGGCTACATCATGATCAAGGGCCGTCCGTGCAAGGTGGTGAATGT
CTCGACCTCCAAGACGGGGAAGCACGGGCACGCCAAGGCAAATTTTACGG
CCATCGACATCTTCAATGGGAAGAAGGTGGAAGACGTGGTGCCTACCACA
CACACCACGTATGTGCCCAACGTGAACCGCTCTGAGTACCAGCTCCTGGA
CATCGAGGACGGCTTTGTCTCGCTCCTGCAGGAGGACGGCGGGACGCGCG
ACGACTTGAAGCTTCCGGACTACCCCGAGGGCTTCGACCAGGAAATCTTG
AAGGCCTACCAGGACGGCAAATCCCTCTCCGTCTCCGTCCTTTCCGCCTG
CGGCATTGACCAGATCATTGCGTACAAG back to top
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