|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100009g105.648.mrna |
| Orig protein id | gnl|cribi|Naga_100009g105.648 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:792266..793040 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2059 ID=rna2059|Name=rna2059|organism=Nannochloropsis gaditana|type=mRNA|length=1302bp
ATGATTCGACGTAGTGGATCGTGCACAAGCTTCAGAGGGGAGGGTGATAT
TATGAAAGATGACATGTACAGGGGTACTCTATCTAGATCTGTGAGGAGTC
CTAAGATGGCGTTCGCTTTTCGCCGCACGGGAAATTCCTGCGGTAATTGG
GGTTTGCGGACCACCTTCCGACGAAGCTTGACGTCGTCCGAAAATGAATT
TAGAAAACCTGTTGAGCTTCGCTCCGACACCTTCACGCGTCCATGCGACG
GGATGCGCAAAGCCATGTATAATGCCGAGGTAGGTGACGTCTGTTACAAC
GAGGACAAAACTGTGCAGCGTCTGGAGGAGGCAGTGGCTGGGCTCCTCGG
AAAAGAAGCTGGCATGTTCGCGGCGTCGGGCACGATGACGAATCTGCTGG
CCTTGGCGGCGCACTGCAAGCGTGGGGACGAGATCCTCCTGGGGCACCAG
AACCACATTTACAACTACGAAGGAGGGGGTGCGTCGGCCCTCCTCGGCGT
GGCCTTTCATCCGGTCGCCACGTTAGGGGATGGGACAAACCGCTTGAGCG
ACCTGCGCGAGGCCATCCGTGACGACGATTTCCACTTCGCGCGCACCTCC
TTAGTAGCCGTGGAGACCACGCACAACAAGGCAAATGGGTCGCCCTTGCC
GCCGTCCTTCATGGCAGAGGTAGGTGCACTTTGTCGCGAGCACCAGCTCG
TCTTCCACGTGGATGGGGCGCGTTTGATGAACGCCTCCGTGGCCCTGGAG
ATGCCCGCCTCGGAGATCGTGCGGGAGGCGGACTCCGTGTCCCTTTGTCT
TAGCAAGGGCCTGGGCGCACCAATCGGCTCCGTGCTGGTGGGCACGCACG
CAATCATTAAGGAGGCGAAGCGCCAAAGAAAAGTCCTGGGGGGTGGCTGG
CGGCAGGCGGGGTCTCTGGCAGCTGCGGGGTTGTACGCTCTGGAGCACAA
TGTACCCATGCTCGAGCGAGACCATCACAACGCGCAGGCCTTGGCCACGG
GCTTCAGCCAGATCCCAGGCGTCGTTTGCGACCCATCGTGCGTCTCCACC
AACATCGTCTACTTCCGCGTCCTGGGCCTGCCCGCGGGGGAGGTGGTGCG
GCGTTTGAAGGAGCAGTACAACGTCCTTTTGGGCATTGGGGCCTATCGAG
GAGACAGGCTCCGCGCCGTCACGAACCTGATGGTGACCGAGGAGGACATC
GCCCGGACGGTCAGGGCCGTGGCGGAGATCGTAGGCAGGACGAACCGGGA
GAAGGTAGACCGGGCCTGCGCGGGCTTCAAAGAGACTGCGGTGGCAGGGT
GA back to topprotein sequence of rna2059 >rna2059-protein ID=rna2059-protein|Name=rna2059|organism=Nannochloropsis gaditana|type=polypeptide|length=194bp
MASHRPGVTRSRETADALGEEDKKLRESCSRDLGSGVHAWRKELPRARLR
VIHVAFVICLFFYVQTLLHAPTTFQRNEGFFHLSPDNNIDEIGVSFYKIR
FSCQNLNANIKAAMIPLISSVLEPSPSINYDFVAGSYFIASLLCLALAVS
SLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTKVE back to topmRNA from alignment at CM002458.1:792266..793040- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2059 ID=rna2059|Name=rna2059|organism=Nannochloropsis gaditana|type=mRNA|length=775bp|location=Sequence derived from alignment at CM002458.1:792266..793040- (Nannochloropsis gaditana)
ATGGCCTCCCATAGGCCTGGCGTGACTCGGAGCCGCGAGACCGCTGACGC
CCTCGGCGAGGAAGACAAAAAATTGCGCGAAAGCTGCAGCAGGGACCTGG
GCTCTGGGGTCCATGCTTGGAGAAAAGAACTTCCGCGTGCAAGACTTCGC
GTGATACACGTAGCGTTTGTGATTTGCCTATTTTTCTATGTACAAAGTCG
TTACATTATGGAAGCCGCATGATCACTGAAACACGGTGATGAGCTCTGTT
TAGCGCTGTTACATGCTCCAACAACTTTCCAACGAAACGAGGGCTTTTTT
CATCTCAGTCCGGACAACAATATCGACGAAATAGGAGTTTCGTTTTACAA
AATACGTTTCAGGTTGGTCATGTTATCGCGTTTTGGCATTGCAGATGGGA
TGTATGGACCTCAAGTCTATTTTTGTCATCATCCACCTCCCATCCAGGGC
CTTTTGCCCATCCTGACGGGCCCCCTTTTCCCACATTGATTACAGCTGCC
AAAATCTCAACGCCAACATTAAGGCAGCTATGATTCCGCTTATATCCTCC
GTTCTTGAACCTTCACCCTCCATCAATTACGATTTCGTGGCGGGATCGTA
TTTTATCGCCTCTCTTCTGTGTCTGGCCCTGGCGGTATCGTCGCTTGTCT
TCGAGGTCTCATCTGTAAAGGGATGGTGGATTGCCCTTGCACCGTTTCCA
CCAGCGCTTGTTTGGAGCTTGATAGTAAGAGCAAGGTGGCATTTGGCACT
TGAATCGAAGACCAAGGTGGAGTAG back to topCoding sequence (CDS) from alignment at CM002458.1:792266..793040- >rna2059 ID=rna2059|Name=rna2059|organism=Nannochloropsis gaditana|type=CDS|length=1755bp|location=Sequence derived from alignment at CM002458.1:792266..793040- (Nannochloropsis gaditana)
CTGCCAAAATCTCAACGCCAACATTAAGGCAGCTATGATTCCGCTTATAT
CCTCCGTTCTTGAACCTTCACCCTCCATCAATTACGATTTCGTGGCGGGA
TCGTATTTTATCGCCTCTCTTCTGTGTCTGGCCCTGGCGGTATCGTCGCT
TGTCTTCGAGGTCTCATCTGTAAAGGGATGGTGGATTGCCCTTGCACCGT
TTCCACCAGCGCTTGTTTGGAGCTTGATAGTAAGAGCAAGGTGGCATTTG
GCACTTGAATCGAAGACCAAGGTGGAGTAGCGCTGTTACATGCTCCAACA
ACTTTCCAACGAAACGAGGGCTTTTTTCATCTCAGTCCGGACAACAATAT
CGACGAAATAGGAGTTTCGTTTTACAAAATACGTTTCAGATGGCCTCCCA
TAGGCCTGGCGTGACTCGGAGCCGCGAGACCGCTGACGCCCTCGGCGAGG
AAGACAAAAAATTGCGCGAAAGCTGCAGCAGGGACCTGGGCTCTGGGGTC
CATGCTTGGAGAAAAGAACTTCCGCGTGCAAGACTTCGCGTGATACACGT
AGCGTTTGTGATTTGCCTATTTTTCTATGTACAAACTGCCAAAATCTCAA
CGCCAACATTAAGGCAGCTATGATTCCGCTTATATCCTCCGTTCTTGAAC
CTTCACCCTCCATCAATTACGATTTCGTGGCGGGATCGTATTTTATCGCC
TCTCTTCTGTGTCTGGCCCTGGCGGTATCGTCGCTTGTCTTCGAGGTCTC
ATCTGTAAAGGGATGGTGGATTGCCCTTGCACCGTTTCCACCAGCGCTTG
TTTGGAGCTTGATAGTAAGAGCAAGGTGGCATTTGGCACTTGAATCGAAG
ACCAAGGTGGAGTAGCGCTGTTACATGCTCCAACAACTTTCCAACGAAAC
GAGGGCTTTTTTCATCTCAGTCCGGACAACAATATCGACGAAATAGGAGT
TTCGTTTTACAAAATACGTTTCAGATGGCCTCCCATAGGCCTGGCGTGAC
TCGGAGCCGCGAGACCGCTGACGCCCTCGGCGAGGAAGACAAAAAATTGC
GCGAAAGCTGCAGCAGGGACCTGGGCTCTGGGGTCCATGCTTGGAGAAAA
GAACTTCCGCGTGCAAGACTTCGCGTGATACACGTAGCGTTTGTGATTTG
CCTATTTTTCTATGTACAAACTGCCAAAATCTCAACGCCAACATTAAGGC
AGCTATGATTCCGCTTATATCCTCCGTTCTTGAACCTTCACCCTCCATCA
ATTACGATTTCGTGGCGGGATCGTATTTTATCGCCTCTCTTCTGTGTCTG
GCCCTGGCGGTATCGTCGCTTGTCTTCGAGGTCTCATCTGTAAAGGGATG
GTGGATTGCCCTTGCACCGTTTCCACCAGCGCTTGTTTGGAGCTTGATAG
TAAGAGCAAGGTGGCATTTGGCACTTGAATCGAAGACCAAGGTGGAGTAG
CGCTGTTACATGCTCCAACAACTTTCCAACGAAACGAGGGCTTTTTTCAT
CTCAGTCCGGACAACAATATCGACGAAATAGGAGTTTCGTTTTACAAAAT
ACGTTTCAGATGGCCTCCCATAGGCCTGGCGTGACTCGGAGCCGCGAGAC
CGCTGACGCCCTCGGCGAGGAAGACAAAAAATTGCGCGAAAGCTGCAGCA
GGGACCTGGGCTCTGGGGTCCATGCTTGGAGAAAAGAACTTCCGCGTGCA
AGACTTCGCGTGATACACGTAGCGTTTGTGATTTGCCTATTTTTCTATGT
ACAAA back to top
|