EWM28605.1, cds2051 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|585111023|gb|EWM28605.1| (hypothetical protein Naga_100009g105 [Nannochloropsis gaditana]) HSP 1 Score: 398.282 bits (1022), Expect = 2.112e-140 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
Query: 1 MASHRPGVTRSRETADALGEEDKKLRESCSRDLGSGVHAWRKELPRARLRVIHVAFVICLFFYVQTLLHAPTTFQRNEGFFHLSPDNNIDEIGVSFYKIRFSCQNLNANIKAAMIPLISSVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTKVE 194
MASHRPGVTRSRETADALGEEDKKLRESCSRDLGSGVHAWRKELPRARLRVIHVAFVICLFFYVQTLLHAPTTFQRNEGFFHLSPDNNIDEIGVSFYKIRFSCQNLNANIKAAMIPLISSVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTKVE
Sbjct: 1 MASHRPGVTRSRETADALGEEDKKLRESCSRDLGSGVHAWRKELPRARLRVIHVAFVICLFFYVQTLLHAPTTFQRNEGFFHLSPDNNIDEIGVSFYKIRFSCQNLNANIKAAMIPLISSVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTKVE 194
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|553185727|ref|XP_005854297.1| (hypothetical protein NGA_2080720, partial [Nannochloropsis gaditana CCMP526] >gi|553190357|ref|XP_005855173.1| hypothetical protein NGA_2080710, partial [Nannochloropsis gaditana CCMP526] >gi|422293887|gb|EKU21187.1| hypothetical protein NGA_2080710, partial [Nannochloropsis gaditana CCMP526] >gi|422294763|gb|EKU22063.1| hypothetical protein NGA_2080720, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 185.652 bits (470), Expect = 9.194e-58 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 102 SCQNLNANIKAAMIPLISSVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTKVE 194
SCQNLNANIKAAMIPLISSVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTKVE
Sbjct: 1 SCQNLNANIKAAMIPLISSVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTKVE 93
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|299471097|emb|CBN78956.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 67.3958 bits (163), Expect = 2.558e-11 Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 122 LEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARW 183
+ PSP INY+FVAGSY + SL+ + L V +V+G W+ APF P L W+L++R++W
Sbjct: 20 MTPSPGINYNFVAGSYLVCSLILVVLLALDKFLHVEAVEGSWVVFAPFLPCLAWALVIRSKW 81
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|695391156|ref|XP_009519938.1| (hypothetical protein PHYSODRAFT_482848 [Phytophthora sojae] >gi|348684835|gb|EGZ24650.1| hypothetical protein PHYSODRAFT_482848 [Phytophthora sojae]) HSP 1 Score: 65.0846 bits (157), Expect = 9.989e-11 Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0
Query: 120 SVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARW 183
V PSP+INY+FVAG Y + LC+ L+V L F ++G++I L PF P +WSL+VR RW
Sbjct: 2 GVFTPSPTINYNFVAGVYAFFTALCILLSV--LHFYTPQLEGFYIVLVPFVPCFLWSLVVRHRW 63
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|1214706519|gb|OWZ18052.1| (hypothetical protein PHMEG_0007923 [Phytophthora megakarya]) HSP 1 Score: 64.3142 bits (155), Expect = 1.795e-10 Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 0
Query: 120 SVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARW 183
V +PSP+INYDFV G Y + + + LAV L F S V+G++I L PF P +WSL+VR RW
Sbjct: 2 EVFKPSPTINYDFVVGVYAFFTAVFVLLAV--LHFYTSQVEGFYIVLVPFVPCFLWSLVVRHRW 63
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|953495959|emb|CEG42855.1| (hypothetical protein PHALS_14664 [Plasmopara halstedii]) HSP 1 Score: 62.7734 bits (151), Expect = 6.477e-10 Identity = 35/76 (46.05%), Postives = 45/76 (59.21%), Query Frame = 0
Query: 120 SVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARW-HLALESKTKVE 194
VL PSP+INY FVAG Y ++LC L V L F V+G+++ L PF P WSL VR RW LA E +++
Sbjct: 2 KVLTPSPAINYTFVAGVYAFFTVLCAVLLV--LHFYTPQVEGFYVVLVPFVPCFFWSLAVRHRWLQLANEDADEIK 75
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|813225462|ref|XP_012211808.1| (hypothetical protein SPRG_16907 [Saprolegnia parasitica CBS 223.65] >gi|641522166|gb|KDO17482.1| hypothetical protein SPRG_16907 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 60.8474 bits (146), Expect = 3.424e-9 Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 0
Query: 120 SVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTKVE 194
++ P+ +INYDFVAG Y + +LL L L V L +V+G++I +APF P L+WSL+VR W L LE K K E
Sbjct: 4 ALFAPAETINYDFVAGMYGLFTLLALVLYV--LQHYTDAVEGFYIVMAPFAPCLLWSLVVRRNW-LRLE-KPKTE 74
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|669136674|ref|XP_008603905.1| (hypothetical protein SDRG_00215 [Saprolegnia diclina VS20] >gi|530744240|gb|EQC42482.1| hypothetical protein SDRG_00215 [Saprolegnia diclina VS20]) HSP 1 Score: 60.4622 bits (145), Expect = 3.885e-9 Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 0
Query: 120 SVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARWHLALESKTK 192
++ P+ +INYDFVAG Y + +LL + L V L +V+G++I +APF P L+WSL+VR W ++KT
Sbjct: 4 NLFAPAETINYDFVAGMYGLFTLLAIVLYV--LQHYTDAVEGFYIVMAPFAPCLLWSLVVRRNWLRLEKAKTD 74
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|301121901|ref|XP_002908677.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262099439|gb|EEY57491.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 58.9214 bits (141), Expect = 2.122e-8 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 0
Query: 122 LEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARW 183
PSP+INY+FVAG Y + LC+ L+V L F ++G++I L PF P WSL+VR W
Sbjct: 4 FTPSPTINYNFVAGIYAFFTALCVLLSV--LHFYTPKLEGFYIVLVPFVPCFFWSLVVRHIW 63
BLAST of EWM28605.1 vs. NCBI_GenBank
Match: gi|675212737|ref|XP_008915253.1| (hypothetical protein PPTG_18835 [Phytophthora parasitica INRA-310] >gi|566007956|gb|ETI30867.1| hypothetical protein F443_22054 [Phytophthora parasitica P1569] >gi|567945463|gb|ETK71274.1| hypothetical protein L915_21462 [Phytophthora parasitica] >gi|567974055|gb|ETL24702.1| hypothetical protein L916_21326 [Phytophthora parasitica] >gi|568003567|gb|ETL77915.1| hypothetical protein L917_21182 [Phytophthora parasitica] >gi|568033502|gb|ETM31208.1| hypothetical protein L914_21192 [Phytophthora parasitica] >gi|568084434|gb|ETM99363.1| hypothetical protein PPTG_18835 [Phytophthora parasitica INRA-310] >gi|570311639|gb|ETO59587.1| hypothetical protein F444_22073 [Phytophthora parasitica P1976] >gi|570935437|gb|ETP00694.1| hypothetical protein F441_21949 [Phytophthora parasitica CJ01A1] >gi|570965707|gb|ETP28826.1| hypothetical protein F442_21918 [Phytophthora parasitica P10297]) HSP 1 Score: 58.9214 bits (141), Expect = 2.332e-8 Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 0
Query: 120 SVLEPSPSINYDFVAGSYFIASLLCLALAVSSLVFEVSSVKGWWIALAPFPPALVWSLIVRARW 183
+ PSP+INY+FVAG Y + LC L+V L F ++G++I L PF P WS +VR W
Sbjct: 2 GLFTPSPTINYNFVAGVYAFFTALCAVLSV--LHFYTPQLEGFYIVLVPFVPCFFWSFVVRHSW 63 The following BLAST results are available for this feature:
BLAST of EWM28605.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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