|
|
Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF399 |
| Orig transcript id | gnl|cribi|Naga_100013g11.9816.mrna |
| Orig protein id | gnl|cribi|Naga_100013g11.9816 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:529787..532042 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna205 ID=rna205|Name=rna205|organism=Nannochloropsis gaditana|type=mRNA|length=3156bp
GGGTGTGTGAAGAGGCAGGAGGATGGGTCTTCCCTCGTCGAACAGGCTGG
CCGCGGCGGTCTTGCTAAAGCTGTATTTAGGCGCTCAGACCCCGCAGGAG
GATGCAACCCGATCAGGCGAGGTTGCAGACGTGCTAGACCACTGCTTTCA
GGTCATCTCCACAATGACCTCATCTAATTTTCCAGTCCTTCAATTACTTC
TACTGAACGAAATAGAGGCCGTGGGCTACGTTAGGCATGAAAAGCCAATT
GCCGTGCTTCTGCGCAAGGTGCACGAAGCGTGCGGCCAGTCTCTCCGCGA
CTGCCTCGAAGCTGTTATGAGAGCATTGGAATCTCCCGATGATCTCATTA
CCCTGCTTACGCTTATCCAAGACATGCTAACGCCACCTGCATGCCCGACT
GTAGATGGAAGATTTCTCAGGCCGACGCACATAGAGCCAGACAGCGTATT
TGGTGTGTTTTTGCGACAGTTGCTACTTGACTGTAATGGGCTTGACTTTG
AGGGTTTGGCGTTTTTGTTGGACGACATAAAAGCTGAAATGTGGGCGATC
TGTCCTCTGTCATCGCAATCACCGGAAAGATCTTCATCTTGCCCGCCCAC
GCAAATACCCGTGCTCTCAAGCACCTCCCAACAAGCGCAAAAGTACCTGC
AACGGCGCATTTTAGACTTGGAACAGGAGGGCGGACGAGACAGTTATGAA
GACGTGGAAGAAGAGATAGAAGCGCTCTTGCAGCAGCATCCAGAACTCCC
ACGAGGCCAATTCCTGCGTTACCTGAACTCGAGCCGCCACCGCGAGGTAG
CGGGTGCCTTGGACGCGCTCCATCGATATTTTGACTATGCGATCCGCCGG
GGCGGGCCCAACGCCACTGGCAAGACATCCAGCAGCCGTAACATTGTCCA
GTATGCAGCCTTGAACCTTGCCGCGCTTCATTTGAGGCTGGGACACACCG
ACCTGGCGTTTGCAGCCATCGGAGAGACCGTACGGGCCGCACAACAGAAC
TCAGACCACGCGTGTATGGCCTTCGCCTTGGGCTGGCTCAGCCAGCTTCT
GACCCTGACCGGCGACCCGCAGGCAGAAGAAATTCTCTTCCGTTGTCTGA
CTCGGGCGGGGGACCAAAAACTCCGGTACTTGGAAAGCTCAACAGCCTTG
TCTTTGGCTGCCGCCGAGGCCAGGGGCGGGAGCCGCCTCCATGCAGGAGA
GCCCCTGGCCGGCCTCAGCCCCCCGCCCCGCCCCGTACCGTCCGCTACCT
GTGTCGAGTCTGCTTACCGGCGGACGGGACCGTCGGGGGGCACCACGACC
GGGTTCTGGGGGGGCGGGCGGCTGGCCGTCGGGCTGGAAGGTAGTCGGCC
TCGGGCAGTCTGGAACCTGCTCCGTCGCTCTGTGGTCGCCGAGACTGCGG
GCCTGGCTCCTCCTCTGGGTATTGCGGCGCCACCACAGACCACGGGGCCT
CCCCAGCCCGTCATTGCGACTCTCGCGGCGTCTTTGACCAGCGCCCTGGC
GTCGCGGGATGCCTTTCCCCTCACATGGGAGGAAGGACTACAGCTTGCGA
ACCGTCGATGCGCTGTGACGGCGGCGGCGTGGGAGCAGTTGGGGCACCGA
GAAATGACTTTGCTGCAGGCTAGAAAGCTTCTGTATTGCGCTTCGAACGG
CTACGGTGCAGAGGCAGGGGCCGAGGGTGATTTGGGAGGCGGTACGGGGA
GTAAGCAGGAAGTGTGTCTAGCGAGAGTCAAGCTCGCGTTAGGTGCCTTG
AAAGGCAGAGGCGGGGACGGACTGGAGGCGGCTGAAGGAGGATCGGTCGA
GGGAGACTTTGGAAGCGAGGAAGAGGTGGGGGGAGCTGGCCTTGGTACAA
GAGGGGCGCGGGAGCCCGCCTCCTCGCTCGGCCAGGGAGCGGAGAAGTCC
GAGGGGAGGGGCGGATTTCGACCAAGACCTCTCACGCAAATGGCTTTCGC
ACATCCAGGACGGCGAGGCACACGTCCTGGTGGCAATATTTGCGCGCATA
AAAGGCGCGGAGAGCGCCAGCTTTCCTTGTACGAGATCGCCTTGACACAG
CTGGCCCGCGCGCAAGACGAGTTCGCCGGGTCAAGCGGCGCCATGCTGCC
CATCGCCATGACCCTCTTGGAGCACGAAGCCGCAGTCCAGTCCGGAAAAT
GGCGCCGCGCCTATGAAGCAGGCCTTCGGCTGCGAAGCCTGAGCGCTCTC
CCAAATGGCCCGGCCGCAGTTGTGCAGGGCAAGGAGGCTTTTGTGGAGGG
GCAGCTTCAGTGGACGTTCGCCTTGCTGGAGTCTGGGCGGGTTAGCGCCT
GCGTGGAAGCATCCCAGCGTCTGGCCGACCTGTGCGGACAGCTGTCGCTC
CCTCTGCACCACATTCGCTGCCTGATCCAGCTTGGGCGCGCGCACCTTCG
AGGCTGCCCGGTGGACCCATCTTCTGCCCTTCCCTCCGTCTTGCGGTCGC
TCACACTCTCCGAGAGGCTCGATGTCGACTCATTGCATGCCTCCGCGACC
CTCCTGCTCGCCCAGATTCACCTTCGACTCGGGTTTCCTATCAAAGCACG
TGCCCTTCTACGGGCAGCACTGCCCATACTCTTGGAACACTCACCTGTGC
AGGAGCAAGGGGAGGCATGGATAACACTCGCGCACTGCGGTCTGCAAGAC
CTTCCGCCGTTTGAAGCGATGACGAGCCCGTCTGCTACCAGCCTACACAC
CCCGAAGGACACGGTCAAGGGCCCTGGCGGCCTACGTGGGGCGTATTTGG
ACCTGCTCGATATCTTGGAACGAGCAGCGAGCGCCTTTGAGCGAAGCCAG
GGCCTTCGGAGTCTGCAAGAGGTCTACTATCTTCAAGCGCGGCTGCATGA
CGCTCTTTCTCAATGCCTGCCCGGGGACGAAGCGGTGGAGAAGGGGGGAC
TGGGTAAAGAGACAGAGAATGAGAGATGTAACCACAAGTACGAGCGGGAG
GAGGCCGCGACGCGCTTCTTTGAGGTAGTCCGGTCTCTGAGGCTGAACAG
TCATTGGGGCGTGGACGCAGAAATGGAGGAGCACGGAGGAAACGGGGGAT
GGCGTTGCGAGATGCGACTACTCGCCTGACCGAATGGGACGATGAGAAAG
GGCGTGTGTAAAGGAAAGGTGTGATAGTGGCTGGCGTGTTGAATAACCTT
TAACGC back to topprotein sequence of rna205 >rna205-protein ID=rna205-protein|Name=rna205|organism=Nannochloropsis gaditana|type=polypeptide|length=387bp
MTRPQFSHHRPRESKSFSSGTLLLLTFILLLPGPASAFCRVHSSKAPSMS
LQPDSSPLSIPRVDLLKGMGIAGLGVAGVSGIGAVKAAQAEANVIVRRPF
LSERIFDTRRRSFLPAEVNRLMHNKALDQRVVCIGEVHNDDAQHYAEYSI
LQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKT
WGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRR
LPAVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLW
DEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFT
ILPVSVKFDAVTSLPMIGDGESYDTRLGDWVYFIEKA back to topmRNA from alignment at CM002455.1:529787..532042- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna205 ID=rna205|Name=rna205|organism=Nannochloropsis gaditana|type=mRNA|length=2256bp|location=Sequence derived from alignment at CM002455.1:529787..532042- (Nannochloropsis gaditana)
TTCCCGCAAGACTCACCAAAAACATTTCCGTTTCGCAAAATGTGCCGGTC
GATACGTGAAAACCCGCATCACACACCCGTGGGCACCCACAGACAAATGC
GCCATCGGAAATTTGCCACCTTTATGGACTCAGAGGCGGTCTCGACGGGA
AACCATTCCACCTTCGCGCTTCCGCCTCCGATTTGTGTTCCTGAGCGTGA
AGTGATGCGTGCCTCCCCATGGAGGCCACGCGCCGCGTGACAAACAGTCT
GCTCCAAGACATTCATTTCATTTTTAGTTTTCGAACATTCACAGCTTTTG
TTCGATATACAGCACATACAGACTCTTCACACCATGACACGGCCGCAATT
TTCACACCACCGCCCCCGCGAAAGCAAATCGTTCTCGTCTGGAACATTGC
TTCTCCTCACGTTTATTTTACTTCTTCCCGGGCCCGCGTCCGCGTTTTGC
CGCGTACACTCCTCGAAAGCTCCCTCTATGTCACTCCAACCTGACTCCTC
ACCTCTCTCCATTCCGCGCGTTGATCTGCTTAAGGGAATGGGCATAGCTG
GCCTTGGAGTTGCAGGTGTCAGCGGCATCGGGGCCGTTAAGGCAGCACAG
GCAGAGGCAAACGTGATTGTGCGCCGCCCTTTTCTATCCGAACGCATCTT
CGACACCAGAAGGCGGTCTTTTCTGCCCGCCGAGGTGAACCGTTTGATGC
ATAACAAGGCGCTCGACCAGCGCGTCGTGTGCATCGGTGAAGTCCACAAC
GATGACGCCCAGCACTACGCGGAGTACTCTATCCTGCAAGCCGTGCACAA
AAGGCGAGGGGCCACGGGCCTAACTGTGGGCCTGGAGATGTTTTATCGAC
AGCACCAAGCCATTTTGGACGACTACGTGTTTGGGAAGGGCACGCTGGCC
TCGCTCAAGGAGGATACCAAGTGGGACAAGACCTGGGGCCACAAGATGGC
TTCATACGCGAAGATCTTCCAGTACGCCAAAGCCCACGGCATCCGTCTTT
GCGGCCTCAATGTCCCCCAGCCAGTTGTGCAAGTGGTGCGGCAAATGGGT
CTCGAACACATTCCGGAGGAGCTGCGCCGGCGCCTGCCCGCGGTGGTCGA
TCTCAGGTAAGACCGCTTCGCGTGATTGCTGTTTGCCGTGCTCTCCTCTC
GCGCACCATGGTTGTGGAAAGAGCTTGCTAACGTTTGACTGGCTCTGTCT
TCCCCTGTTCTGACGTCGCAGCAATACCGCCCACCGAGAGGACTTCCTGG
CCACTATGCGCTACTTTGCCAGTTTCCACGGGGGCGCCAAGGGGGGAGGC
ATACCGGAGGAGGCTCTTGAACGACTGTACGAGGCACAGACGTTGTGGGA
CGAATACATGGCGGAGAGCGCGGCGCACATCCTGGAGGCTGACCCGCGGA
GTCGGATGATCGTCTTGGCGGGAACCAACCACATACAAAACAGGTATGGT
GTGCCCGATCGCATCATGCGGCGCCTAGGGGGCCAACCTGTCTTTACGAT
TCTGCCCGTTTCCGTCAAATTCGACGCTGTGACATCCTTGCCGATGATAG
GCGACGGGGAGAGCTACGATACTCGACTGGGGGACTGGGTGTATTTCATT
GAGAAAGCCTGAACAGGAACGGGGATGGGAAGCGACACGAGAGCACGGAG
GAGCTTTTTTTTCCATGGCAAGGAAGCTTTGAGATGTAAAAAATGTAAAT
TGTAAAAGTGGCGAGGCAGGTCAGGTGGGCAGTGAATAGCTGGGAGAGGA
AGTATAAATACATGGGAAGTGCACTCTAGATGTAGGAGTTGGCAATAGAT
TAATGGAAGAAAGACACGACGATCATGTCGCCCTTGATGGTGTTTGACCC
GACAGTAAGATCGAAACCTGTGAATTATCAGGCCATGCGAAAGGTGTCTG
TAAAATTTCAGTTCCTTGGCTTCTGCAGACCAAGCTAGGGGCATACAGAT
GGCGGGTTTTGGGTCAAAACTTCAGGTCGAAACGTGTTGAAGTTGTATTG
TACTTGGATACGCTTGTCCCGAAAGCAAAAGTGAGCTGGCGGGCATGAAG
CTCATTTTGTACTTTTTTTGGGTAAATTGAAACTTGTGGCAATTAAATCA
AGCAGGATGCGCAGTACGAAAGAAGAAGAGCTTCGTTGCGGGGACCAAAC
CGCAAATGTAGGCCAGAAGGAATTGGTATTTTTCAGCCACGAACGTCATG
ATAAAATCTATCCATCCATTACTTGGTGCGTCGATCAAATGTACACTCCA
TGCCAA back to topCoding sequence (CDS) from alignment at CM002455.1:529787..532042- >rna205 ID=rna205|Name=rna205|organism=Nannochloropsis gaditana|type=CDS|length=2328bp|location=Sequence derived from alignment at CM002455.1:529787..532042- (Nannochloropsis gaditana)
CAATACCGCCCACCGAGAGGACTTCCTGGCCACTATGCGCTACTTTGCCA
GTTTCCACGGGGGCGCCAAGGGGGGAGGCATACCGGAGGAGGCTCTTGAA
CGACTGTACGAGGCACAGACGTTGTGGGACGAATACATGGCGGAGAGCGC
GGCGCACATCCTGGAGGCTGACCCGCGGAGTCGGATGATCGTCTTGGCGG
GAACCAACCACATACAAAACAGGTATGGTGTGCCCGATCGCATCATGCGG
CGCCTAGGGGGCCAACCTGTCTTTACGATTCTGCCCGTTTCCGTCAAATT
CGACGCTGTGACATCCTTGCCGATGATAGGCGACGGGGAGAGCTACGATA
CTCGACTGGGGGACTGGGTGTATTTCATTGAGAAAGCCTGAATGACACGG
CCGCAATTTTCACACCACCGCCCCCGCGAAAGCAAATCGTTCTCGTCTGG
AACATTGCTTCTCCTCACGTTTATTTTACTTCTTCCCGGGCCCGCGTCCG
CGTTTTGCCGCGTACACTCCTCGAAAGCTCCCTCTATGTCACTCCAACCT
GACTCCTCACCTCTCTCCATTCCGCGCGTTGATCTGCTTAAGGGAATGGG
CATAGCTGGCCTTGGAGTTGCAGGTGTCAGCGGCATCGGGGCCGTTAAGG
CAGCACAGGCAGAGGCAAACGTGATTGTGCGCCGCCCTTTTCTATCCGAA
CGCATCTTCGACACCAGAAGGCGGTCTTTTCTGCCCGCCGAGGTGAACCG
TTTGATGCATAACAAGGCGCTCGACCAGCGCGTCGTGTGCATCGGTGAAG
TCCACAACGATGACGCCCAGCACTACGCGGAGTACTCTATCCTGCAAGCC
GTGCACAAAAGGCGAGGGGCCACGGGCCTAACTGTGGGCCTGGAGATGTT
TTATCGACAGCACCAAGCCATTTTGGACGACTACGTGTTTGGGAAGGGCA
CGCTGGCCTCGCTCAAGGAGGATACCAAGTGGGACAAGACCTGGGGCCAC
AAGATGGCTTCATACGCGAAGATCTTCCAGTACGCCAAAGCCCACGGCAT
CCGTCTTTGCGGCCTCAATGTCCCCCAGCCAGTTGTGCAAGTGGTGCGGC
AAATGGGTCTCGAACACATTCCGGAGGAGCTGCGCCGGCGCCTGCCCGCG
GTGGTCGATCTCAGCAATACCGCCCACCGAGAGGACTTCCTGGCCACTAT
GCGCTACTTTGCCAGTTTCCACGGGGGCGCCAAGGGGGGAGGCATACCGG
AGGAGGCTCTTGAACGACTGTACGAGGCACAGACGTTGTGGGACGAATAC
ATGGCGGAGAGCGCGGCGCACATCCTGGAGGCTGACCCGCGGAGTCGGAT
GATCGTCTTGGCGGGAACCAACCACATACAAAACAGGTATGGTGTGCCCG
ATCGCATCATGCGGCGCCTAGGGGGCCAACCTGTCTTTACGATTCTGCCC
GTTTCCGTCAAATTCGACGCTGTGACATCCTTGCCGATGATAGGCGACGG
GGAGAGCTACGATACTCGACTGGGGGACTGGGTGTATTTCATTGAGAAAG
CCTGAATGACACGGCCGCAATTTTCACACCACCGCCCCCGCGAAAGCAAA
TCGTTCTCGTCTGGAACATTGCTTCTCCTCACGTTTATTTTACTTCTTCC
CGGGCCCGCGTCCGCGTTTTGCCGCGTACACTCCTCGAAAGCTCCCTCTA
TGTCACTCCAACCTGACTCCTCACCTCTCTCCATTCCGCGCGTTGATCTG
CTTAAGGGAATGGGCATAGCTGGCCTTGGAGTTGCAGGTGTCAGCGGCAT
CGGGGCCGTTAAGGCAGCACAGGCAGAGGCAAACGTGATTGTGCGCCGCC
CTTTTCTATCCGAACGCATCTTCGACACCAGAAGGCGGTCTTTTCTGCCC
GCCGAGGTGAACCGTTTGATGCATAACAAGGCGCTCGACCAGCGCGTCGT
GTGCATCGGTGAAGTCCACAACGATGACGCCCAGCACTACGCGGAGTACT
CTATCCTGCAAGCCGTGCACAAAAGGCGAGGGGCCACGGGCCTAACTGTG
GGCCTGGAGATGTTTTATCGACAGCACCAAGCCATTTTGGACGACTACGT
GTTTGGGAAGGGCACGCTGGCCTCGCTCAAGGAGGATACCAAGTGGGACA
AGACCTGGGGCCACAAGATGGCTTCATACGCGAAGATCTTCCAGTACGCC
AAAGCCCACGGCATCCGTCTTTGCGGCCTCAATGTCCCCCAGCCAGTTGT
GCAAGTGGTGCGGCAAATGGGTCTCGAACACATTCCGGAGGAGCTGCGCC
GGCGCCTGCCCGCGGTGGTCGATCTCAG back to top
|