EWM30528.1, cds205 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|585113192|gb|EWM30528.1| (protein of unknown function DUF399 [Nannochloropsis gaditana]) HSP 1 Score: 801.586 bits (2069), Expect = 0.000e+0 Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0
Query: 1 MTRPQFSHHRPRESKSFSSGTLLLLTFILLLPGPASAFCRVHSSKAPSMSLQPDSSPLSIPRVDLLKGMGIAGLGVAGVSGIGAVKAAQAEANVIVRRPFLSERIFDTRRRSFLPAEVNRLMHNKALDQRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFDAVTSLPMIGDGESYDTRLGDWVYFIEKA 387
MTRPQFSHHRPRESKSFSSGTLLLLTFILLLPGPASAFCRVHSSKAPSMSLQPDSSPLSIPRVDLLKGMGIAGLGVAGVSGIGAVKAAQAEANVIVRRPFLSERIFDTRRRSFLPAEVNRLMHNKALDQRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFDAVTSLPMIGDGESYDTRLGDWVYFIEKA
Sbjct: 1 MTRPQFSHHRPRESKSFSSGTLLLLTFILLLPGPASAFCRVHSSKAPSMSLQPDSSPLSIPRVDLLKGMGIAGLGVAGVSGIGAVKAAQAEANVIVRRPFLSERIFDTRRRSFLPAEVNRLMHNKALDQRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFDAVTSLPMIGDGESYDTRLGDWVYFIEKA 387
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|299469727|emb|CBN76581.1| (protein of unknown function DUF399 [Ectocarpus siliculosus]) HSP 1 Score: 247.284 bits (630), Expect = 1.076e-75 Identity = 144/312 (46.15%), Postives = 189/312 (60.58%), Query Frame = 0
Query: 83 GAVKAAQAEANVIVRRP-----FLSERIFDTRRRSFLPAEVNRLMH-NKALDQRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATG--LTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFDAVTSLPMIGDGESYDTRLGDWVYFIEK 386
G V AA A A V R P ERIFDT R+SF+PA+ +RL+ RVVC GE+H H ++ +++AV A L +GLEMFYRQ Q LD YVF G LA+LK DTKWD+TWG YAKIF YA+ +GIRL GLN PQ ++ ++ ++G+ +P+ LR LP +DLSN AHR+ R+ + +G G GI A+ R+YEAQTLWDEYMAESA+ L+ R+++LAG H+Q R G+PDR+ RR G +P FTI+PVSV++ LP I T DWVYF +
Sbjct: 29 GLVGAALAPALVKPRPPPSYDVMKYERIFDTARKSFVPADPSRLIFPGVGFADRVVCTGEMHTHPLHHRMQFEVIKAVASVTKAKTEPLAIGLEMFYRQQQDALDRYVFNHGDLAALKLDTKWDETWGFDFNQYAKIFHYARENGIRLVGLNAPQSLLHLINKVGIAGLPQRLREVLPE-MDLSNMAHRK------RFEDAINGFQHGAGIDAAAMNRMYEAQTLWDEYMAESASRYLQR-AGGRIVLLAGNGHVQARDGIPDRVERRTGLKP-FTIVPVSVEW-TEDGLPDIDHPPG--TAFADWVYFTQN 328
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|544213419|ref|XP_005536857.1| (hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D] >gi|449017419|dbj|BAM80821.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 189.504 bits (480), Expect = 5.011e-52 Identity = 112/295 (37.97%), Postives = 168/295 (56.95%), Query Frame = 0
Query: 105 IFDTRRRSFLPAEVNRLMHNKALDQ---RVVCIGEVHNDDAQHYAEYSILQAVHKR-RGATG-------LTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDL-SNTAHREDFLATMRYFASFHGGAKGGGIPEE-ALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKF--DAVTSLPMIGDGESYDTRLGDWVYFI 384
IFDT SFLP RL+ + + V+ +GE H D H + ++L + K RG + +G+E FYRQHQ LD Y+ GK L L T+++ T+G+ + I +YA+ + I++ GLN P +VQ+V GL+H+PE L LP +D+ N AHRE F+ M+ A G I +E AL+R+YE+Q LWDEYM+ESAA LE +PR + + AG H++ R G+PDR+ RR G+P FT++P +V F D +P G+ + +GDW++++
Sbjct: 122 IFDTMIGSFLPPRPERLLSRRIRHKGARSVLLVGETHTDRQHHRVQLALLDSFVKHVRGQRNESIAGAPIAIGMEHFYRQHQVHLDRYIAGKIELRQLLAITRFELTFGYSAQLWQDILEYARENRIQVVGLNTPFELVQLVAHYGLDHLPERLYEVLPRDMDVHGNAAHRERFIQRMKALGV---EAHGPLINDEAALQRMYESQVLWDEYMSESAALWLERNPRGHLCIFAGNGHVEGRVGIPDRLTRR-SGRPTFTVVPYTVPFQSDGWPDIPHPGNRD-----VGDWLWYL 407
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|546315823|ref|XP_005715972.1| (unnamed protein product [Chondrus crispus] >gi|507112474|emb|CDF36153.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 177.948 bits (450), Expect = 8.516e-49 Identity = 110/336 (32.74%), Postives = 179/336 (53.27%), Query Frame = 0
Query: 57 PLSIPRVDLLKGMGIAGLGVAGVSGIGAVKAAQAEANVIVRRPFLSERIFDTRRRSFLPAEVNRLMHNKALD---QRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEA-LERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFDAVT--SLPMIGDGESYDTRLGDWVYFIEK 386
P+S R +LL+ +A L + A+ A R P+ +R++D+R SF+PA + + + R + GE+H++ H A+ +++ + A LTVG E FYR H LD ++ GK + L + T+W +TWG Y IF+Y + + I + GLN+P V+ V GLE +PE L++ LP +D+ N H F+ + +S H GA P++A L+R YEAQ LW+E+M++S A L+ P +RM+ L G+ H++ RYG P+RI RR +P +T++P V + + S+P I E + D V++ +
Sbjct: 32 PVSPTRRELLQAFAVAPLASLATASERALAAETRP-----RSPW--DRLYDSRSGSFVPASALAALLRRDVGLSFNRCIVAGEIHDNVCTHAAQLAVIDGAARLPDAMPLTVGFEQFYRMHNMYLDAFIEGKISTGELLQKTRWAETWGFDPKLYTPIFEYCRDNQIPMVGLNLPVQFVKQVSNYGLEGLPEGLKQFLPDNMDVGNKEHYRHFMQLIGVDSS-HIGAN----PDQALLDRYYEAQVLWEEWMSQSVAMSLKDRPGTRMVALIGSGHVEGRYGFPNRIERRSAERP-YTVVPRPVAWTSNEGHSMPNISRPE---VDIADLVWYTRR 351
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|1189391014|gb|OSX77957.1| (hypothetical protein BU14_0127s0054 [Porphyra umbilicalis]) HSP 1 Score: 167.548 bits (423), Expect = 1.319e-44 Identity = 109/279 (39.07%), Postives = 153/279 (54.84%), Query Frame = 0
Query: 124 NKALDQRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATG------------LTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPE-----EALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFDAV--TSLPMIGDGESYDTRLGDWVYF 383
N AL R+V +GE H H + I++A+H A+ + VGLE F+RQH LD YV G+ +L L T W TWG+ A Y +F+Y +AH +R+ GLN P +V V + GL+ +P + LP + DL + H F A M GGG + L YEA+TLWDEYMAESAA +L ADP R++VLAGT H++ R G+P+R+ RR+GG+ FT+LP SV++ + TS+P I D L DW+++
Sbjct: 91 NPALIDRLVVVGETHTHPTHHRIQLDIIRALHDLSTASPSAAGASAAAGRPVVVGLEQFHRQHTPHLDAYVGGRISLPRLLALTDWAHTWGYPAALYTPLFRYCRAHRVRMVGLNAPAALVAAVARGGLDSLPASVVPYLPEM-DLGSRPHFARFAAKMSAMGGGAHHGGGGGAEGGRFDLQVLRHYYEAETLWDEYMAESAAEVLAADPAVRLVVLAGTAHVEARDGLPERVERRVGGR-AFTVLPTSVRWASAAGTSVPDI-DAPLGGGGLADWIWY 366
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|504974393|ref|WP_015161495.1| (iron-regulated protein [Chamaesiphon minutus] >gi|428019297|gb|AFY95391.1| uncharacterized iron-regulated protein [Chamaesiphon minutus PCC 6605]) HSP 1 Score: 146.362 bits (368), Expect = 2.264e-37 Identity = 80/231 (34.63%), Postives = 133/231 (57.58%), Query Frame = 0
Query: 131 VVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAV--VDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQPVFTILPVSVKFD 359
V+ +GE H+ + +I++A+ + +G+EMF R Q +LD Y+ GK T+A L+ +++DK WG+K YA I ++AKA+ + + LN P + + + GLE + R+ +P + +D SN +++ L + R H G I ++ +R Y AQ LWDE MAE A+ ++ +PRS+ +V+AG++HI YG+PDR++RR+ G P FT V + D
Sbjct: 56 VIYLGETHDRPIDRQHQLAIIEALFQHNPQVA--IGMEMFQRPAQPLLDRYLAGKITVAELRVQSEFDKRWGYKWEDYAPILEFAKANRLPVIALNTPTEITRKAAREGLESLTAAERQWIPPLTEIDRSNAKYQQMILGSYRQ----HAGIV--SISSKSFDRFYNAQLLWDETMAERVANFVKQNPRSQKVVIAGSSHIIYGYGIPDRVLRRVSG-PKFTQKTVLLSLD 277
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|501114827|ref|WP_012164238.1| (hypothetical protein [Acaryochloris marina] >gi|158307256|gb|ABW28873.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]) HSP 1 Score: 145.591 bits (366), Expect = 3.782e-37 Identity = 84/224 (37.50%), Postives = 127/224 (56.70%), Query Frame = 0
Query: 127 LDQ----RVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLP--AVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLG 344
LDQ +VV +GE HN A H A+ +I++ + +R+ L + +EMF R Q ++ Y+ G+ T A L+++T++ + WG YA I ++AK H + + LN P + + V + GLE + E +P A +DLSNTA+R+ L T+ + FH G EE ER + AQ LWDE MAE A + P ++V+AG HI+ YG+PDR+ RRL
Sbjct: 44 LDQLSKVQVVYLGETHNSVADHKAQLAIIRGLFERQ--PKLAIAMEMFQRPFQEPINRYLAGEITEAQLQKETEYRQRWGFDWEFYAPILRFAKQHQLPVIALNTPTEITKKVGRQGLESLTPEDYTFIPPLADIDLSNTAYRQK-LTTI--YEQFHHGPAS----EEGFERFFSAQVLWDETMAEKIAQTVRQQPDQLVVVIAGKGHIEQGYGIPDRVSRRLS 258
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|498158056|ref|WP_010472212.1| (hypothetical protein [Acaryochloris sp. CCMEE 5410]) HSP 1 Score: 145.591 bits (366), Expect = 5.124e-37 Identity = 84/224 (37.50%), Postives = 127/224 (56.70%), Query Frame = 0
Query: 127 LDQ----RVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLP--AVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLG 344
LDQ +VV +GE HN A H A+ +IL+ + +R+ L + +EMF R Q ++ Y+ G+ T A L+++T++ + WG YA + ++AK H + + LN P + + V + GLE + E +P A +DLSNTA+R+ L T+ + FH G EE ER + AQ LWDE MAE A + P ++V+AG HI+ YG+PDR+ RRL
Sbjct: 44 LDQLSKVQVVYLGETHNSVADHKAQLAILRGLFERQ--PKLAIAMEMFQRPFQEPINRYLAGEITEAQLQKETEYRQRWGFDWEFYAPLLRFAKQHQLPVIALNTPTEITKKVGRQGLESLSPEDYAFIPPLADIDLSNTAYRQK-LTTI--YEQFHHGPAS----EEGFERFFSAQVLWDETMAEKIAQTVRQQPDQLVVVIAGKGHIEQGYGIPDRVSRRLN 258
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|1130429868|ref|WP_075598615.1| (hypothetical protein [Oscillatoriales cyanobacterium 'hensonii'] >gi|1129072390|gb|OLP18353.1| hypothetical protein BST81_11195 [Oscillatoriales cyanobacterium 'hensonii']) HSP 1 Score: 144.821 bits (364), Expect = 6.844e-37 Identity = 80/245 (32.65%), Postives = 133/245 (54.29%), Query Frame = 0
Query: 99 PFLSERIFDTRRRSFLPAEVNRLMHNKALDQRVVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAVVDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRL 343
P L++++F R + E ++ + A V+ +GE H+ A H + +++ +H++ L +GLEMF R +Q +LD Y+ G+ T L++ +++D+ WG+ + YA I +YA+ H + L LN P + + V + GLE + R +P + +L R D +A R + G G ER + AQ LWDE MAE+ A L A P +++VLAG H+ + YG+PDR+ RR+
Sbjct: 23 PALAQQVFSPPLRQVMTLE--EVLQDLA-QATVIYLGETHDRPADHETQLDLIRQLHRKN--PRLAIGLEMFQRPYQPVLDQYLAGRITEEELRQQSQYDQRWGYPWSYYAPILRYAREHRLPLLALNSPSEITRKVARQGLESLTAAERAMIPPIAEL-----RTDNVAYRRMMRQIYEGIHKGQSASGNFERFFLAQVLWDETMAETIARFLTAQPDYQVVVLAGQGHVVHGYGIPDRVARRM 257
BLAST of EWM30528.1 vs. NCBI_GenBank
Match: gi|1003386745|dbj|BAU66569.1| (hypothetical protein STA3757_39740 [Stanieria sp. NIES-3757]) HSP 1 Score: 141.354 bits (355), Expect = 1.251e-35 Identity = 77/218 (35.32%), Postives = 123/218 (56.42%), Query Frame = 0
Query: 131 VVCIGEVHNDDAQHYAEYSILQAVHKRRGATGLTVGLEMFYRQHQAILDDYVFGKGTLASLKEDTKWDKTWGHKMASYAKIFQYAKAHGIRLCGLNVPQPVVQVVRQMGLEHIPEELRRRLPAV--VDLSNTAHREDFLATMRYFASFHGGAKGGGIPEEALERLYEAQTLWDEYMAESAAHILEADPRSRMIVLAGTNHIQNRYGVPDRIMRRLGGQ 346
VV +GE H+ A+H A+ I+ A++++ +T+ LE+F R Q IL+ Y+ G+ L++ T++D+ WG YA I ++AKAH + + LN P + + V GLE + E R +P V +DL N A+R+ ++ S H G + + + AQ LWDE MA++ A +A+P ++IVLAG HI + YG+PDR+ RR+ Q
Sbjct: 53 VVYLGENHDSVAEHQAQLEIITALYQKN--PQITIALEIFQRPFQPILERYLAGEINETQLRKQTEYDQRWGFDWQYYAPILRFAKAHNLPIIALNTPTEITRKVASQGLESLSGEDFRYIPPVAEIDLDNQAYRQ----MLQNIYSGHNHNSHGN--SDGFDNFFAAQVLWDETMADAIAQFYQANPNYQIIVLAGQGHIVHGYGIPDRVKRRINEQ 262 The following BLAST results are available for this feature:
BLAST of EWM30528.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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