rna2044, rna2044 (mRNA) Nannochloropsis gaditana

Overview
Namerna2044
Unique Namerna2044
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length261
Alignment locationCM002458.1:760385..761607 -

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Properties
Property NameValue
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100182g7.950.mrna
Orig protein idgnl|cribi|Naga_100182g7.950
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:760385..761607 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100182g7gene1955Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna2044rna2044-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28640.1cds2036Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna2044 ID=rna2044|Name=rna2044|organism=Nannochloropsis gaditana|type=mRNA|length=261bp
ATGAATATCAGGGAGTGCCACGGGCCGAGCGTGGCAGGCATAAGGAGGTT
TAGGAAACGTATCGATTCATTAGTAGGCCCACAGGTTCGCACGGGGAGGT
TGGCGTCTCTCGCATGGACAAGAGATGTCACGTTACGGCTACCAGCTGTC
CGTATGATTTATTCAGTGGAAGAATATTTATTTTTAGGCGACTGTTTTGA
GAGAGACTGGTCCAGGGTGATTTTATTTGGCCGCCGTTTCTCGTGGGAAA
CAAGGACGTAA
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protein sequence of rna2044

>rna2044-protein ID=rna2044-protein|Name=rna2044|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MDVENEARAGSSVGVSDLKVMGDPSLASQDQTVEEYLKVHCSQLVGDLNA
HAESLIKNLQHELERGKAEIMGMVQGNTVGPTSSDAGDSGASTSTATGNV
PARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRLVQSKGRKEFVVGRST
GKKVKEHGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACL
EERVPTRVQTGDVLKDRPGVCWADRSRQRLEQGGERGLSPAQREGVQPVI
IPELDRCTIGKDKQREEGQE
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mRNA from alignment at CM002458.1:760385..761607-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna2044 ID=rna2044|Name=rna2044|organism=Nannochloropsis gaditana|type=mRNA|length=1223bp|location=Sequence derived from alignment at CM002458.1:760385..761607- (Nannochloropsis gaditana)
ATGGACGTGGAGAATGAGGCAAGAGCTGGTTCTTCGGTCGGCGTCTCCGA
CCTGAAGGTAATGGGCGACCCCTCCCTCGCCTCGCAAGACCAGACCGTCG
AAGAGTACCTGAAAGTGCACTGCAGTCAATTAGTAGGAGACTTGAATGCG
CATGCTGAGAGCCTCATCAAGAATTTGCAGCACGAGCTCGAAAGAGGCAA
GGCGGAAATTATGGGCATGGTTCAGGGAAACACGGGTAAGTAAGCATACC
ATGGAAATAATATACATAAGGGTAATAAATATAAAGAGGAACGAGGAACG
AGATTTTACTGTCTATCATTTAGCAGCTCAGTAATTCTGTGCACATCAAC
AGTCGGGCCAACCTCGAGCGATGCGGGTGACTCCGGTGCCTCGACAAGTA
CTGCTACTGGGAATGTACCGGCGCGATCAGTGGCTGCGTCGACGGGCCCG
CCCGGTAGCACGTTTCTCACCGTGATCTTGACAGTAACAGACGGACCGTA
TGCAGGCACCGTCTTTCGGCTTGTACAAAGCAAGGGGCGGAAAGAGTTTG
TTGTCGGGAGATCAACGGGTAAGAAAGTGAAGGAGCACGGGGCAAGCATG
CCGCAAGACCCCGAGGTCTCCACAGTGCATGGTCGCTTCGAGTGTCGCGC
AGGCGGTAAAGTCATGTATGAGGATCTGGGTAGCACGAACGGAAGCTTCA
TTAACGGGTGCGTCGGAATGCTTGGGGTGGCTCGATCGATGGGACGGGCG
GGAGGGATGAGGCAAGTAAGGGGTCCCTGACATGTGATCGAGCTCGTAGT
ATGGTATGCCTGCACTGTGTTTTGTCGCCAATAGGGGCTTTTTGATGCGG
TATCTCACACTTCTTTCGCACGTCTACATCCATGCACGATCCCCCTCTTC
ATCTCTCCCGATGCTCGCAGGGCCTGTCTGGAGGAGAGGGTCCCGACACG
CGTTCAAACGGGGGATGTGCTGAAGGTGGGAGGGGGTAAAATGACGATCG
AGATCCAAACACGGCACGACGCGTCTCAGTGAGGTCCGGGAACGATGGGG
GGCAGGACCGTCCTGGGGTGTGTTGGGCGGATCGAAGTCGACAGCGCTTG
GAACAGGGTGGAGAGCGAGGGCTTTCTCCTGCGCAGCGTGAGGGCGTGCA
GCCTGTGATCATTCCAGAGCTTGATCGATGTACAATAGGGAAAGATAAGC
AAAGGGAAGAGGGCCAGGAATAA
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Coding sequence (CDS) from alignment at CM002458.1:760385..761607-

>rna2044 ID=rna2044|Name=rna2044|organism=Nannochloropsis gaditana|type=CDS|length=3252bp|location=Sequence derived from alignment at CM002458.1:760385..761607- (Nannochloropsis gaditana)
GACCGTCCTGGGGTGTGTTGGGCGGATCGAAGTCGACAGCGCTTGGAACA
GGGTGGAGAGCGAGGGCTTTCTCCTGCGCAGCGTGAGGGCGTGCAGCCTG
TGATCATTCCAGAGCTTGATCGATGTACAATAGGGAAAGATAAGCAAAGG
GAAGAGGGCCAGGAATAAGGCCTGTCTGGAGGAGAGGGTCCCGACACGCG
TTCAAACGGGGGATGTGCTGAAGTCGGGCCAACCTCGAGCGATGCGGGTG
ACTCCGGTGCCTCGACAAGTACTGCTACTGGGAATGTACCGGCGCGATCA
GTGGCTGCGTCGACGGGCCCGCCCGGTAGCACGTTTCTCACCGTGATCTT
GACAGTAACAGACGGACCGTATGCAGGCACCGTCTTTCGGCTTGTACAAA
GCAAGGGGCGGAAAGAGTTTGTTGTCGGGAGATCAACGGGTAAGAAAGTG
AAGGAGCACGGGGCAAGCATGCCGCAAGACCCCGAGGTCTCCACAGTGCA
TGGTCGCTTCGAGTGTCGCGCAGGCGGTAAAGTCATGTATGAGGATCTGG
GTAGCACGAACGGAAGCTTCATTAACGGATGGACGTGGAGAATGAGGCAA
GAGCTGGTTCTTCGGTCGGCGTCTCCGACCTGAAGGTAATGGGCGACCCC
TCCCTCGCCTCGCAAGACCAGACCGTCGAAGAGTACCTGAAAGTGCACTG
CAGTCAATTAGTAGGAGACTTGAATGCGCATGCTGAGAGCCTCATCAAGA
ATTTGCAGCACGAGCTCGAAAGAGGCAAGGCGGAAATTATGGGCATGGTT
CAGGGAAACACGGGACCGTCCTGGGGTGTGTTGGGCGGATCGAAGTCGAC
AGCGCTTGGAACAGGGTGGAGAGCGAGGGCTTTCTCCTGCGCAGCGTGAG
GGCGTGCAGCCTGTGATCATTCCAGAGCTTGATCGATGTACAATAGGGAA
AGATAAGCAAAGGGAAGAGGGCCAGGAATAAGGCCTGTCTGGAGGAGAGG
GTCCCGACACGCGTTCAAACGGGGGATGTGCTGAAGTCGGGCCAACCTCG
AGCGATGCGGGTGACTCCGGTGCCTCGACAAGTACTGCTACTGGGAATGT
ACCGGCGCGATCAGTGGCTGCGTCGACGGGCCCGCCCGGTAGCACGTTTC
TCACCGTGATCTTGACAGTAACAGACGGACCGTATGCAGGCACCGTCTTT
CGGCTTGTACAAAGCAAGGGGCGGAAAGAGTTTGTTGTCGGGAGATCAAC
GGGTAAGAAAGTGAAGGAGCACGGGGCAAGCATGCCGCAAGACCCCGAGG
TCTCCACAGTGCATGGTCGCTTCGAGTGTCGCGCAGGCGGTAAAGTCATG
TATGAGGATCTGGGTAGCACGAACGGAAGCTTCATTAACGGATGGACGTG
GAGAATGAGGCAAGAGCTGGTTCTTCGGTCGGCGTCTCCGACCTGAAGGT
AATGGGCGACCCCTCCCTCGCCTCGCAAGACCAGACCGTCGAAGAGTACC
TGAAAGTGCACTGCAGTCAATTAGTAGGAGACTTGAATGCGCATGCTGAG
AGCCTCATCAAGAATTTGCAGCACGAGCTCGAAAGAGGCAAGGCGGAAAT
TATGGGCATGGTTCAGGGAAACACGGGACCGTCCTGGGGTGTGTTGGGCG
GATCGAAGTCGACAGCGCTTGGAACAGGGTGGAGAGCGAGGGCTTTCTCC
TGCGCAGCGTGAGGGCGTGCAGCCTGTGATCATTCCAGAGCTTGATCGAT
GTACAATAGGGAAAGATAAGCAAAGGGAAGAGGGCCAGGAATAAGGCCTG
TCTGGAGGAGAGGGTCCCGACACGCGTTCAAACGGGGGATGTGCTGAAGT
CGGGCCAACCTCGAGCGATGCGGGTGACTCCGGTGCCTCGACAAGTACTG
CTACTGGGAATGTACCGGCGCGATCAGTGGCTGCGTCGACGGGCCCGCCC
GGTAGCACGTTTCTCACCGTGATCTTGACAGTAACAGACGGACCGTATGC
AGGCACCGTCTTTCGGCTTGTACAAAGCAAGGGGCGGAAAGAGTTTGTTG
TCGGGAGATCAACGGGTAAGAAAGTGAAGGAGCACGGGGCAAGCATGCCG
CAAGACCCCGAGGTCTCCACAGTGCATGGTCGCTTCGAGTGTCGCGCAGG
CGGTAAAGTCATGTATGAGGATCTGGGTAGCACGAACGGAAGCTTCATTA
ACGGATGGACGTGGAGAATGAGGCAAGAGCTGGTTCTTCGGTCGGCGTCT
CCGACCTGAAGGTAATGGGCGACCCCTCCCTCGCCTCGCAAGACCAGACC
GTCGAAGAGTACCTGAAAGTGCACTGCAGTCAATTAGTAGGAGACTTGAA
TGCGCATGCTGAGAGCCTCATCAAGAATTTGCAGCACGAGCTCGAAAGAG
GCAAGGCGGAAATTATGGGCATGGTTCAGGGAAACACGGGACCGTCCTGG
GGTGTGTTGGGCGGATCGAAGTCGACAGCGCTTGGAACAGGGTGGAGAGC
GAGGGCTTTCTCCTGCGCAGCGTGAGGGCGTGCAGCCTGTGATCATTCCA
GAGCTTGATCGATGTACAATAGGGAAAGATAAGCAAAGGGAAGAGGGCCA
GGAATAAGGCCTGTCTGGAGGAGAGGGTCCCGACACGCGTTCAAACGGGG
GATGTGCTGAAGTCGGGCCAACCTCGAGCGATGCGGGTGACTCCGGTGCC
TCGACAAGTACTGCTACTGGGAATGTACCGGCGCGATCAGTGGCTGCGTC
GACGGGCCCGCCCGGTAGCACGTTTCTCACCGTGATCTTGACAGTAACAG
ACGGACCGTATGCAGGCACCGTCTTTCGGCTTGTACAAAGCAAGGGGCGG
AAAGAGTTTGTTGTCGGGAGATCAACGGGTAAGAAAGTGAAGGAGCACGG
GGCAAGCATGCCGCAAGACCCCGAGGTCTCCACAGTGCATGGTCGCTTCG
AGTGTCGCGCAGGCGGTAAAGTCATGTATGAGGATCTGGGTAGCACGAAC
GGAAGCTTCATTAACGGATGGACGTGGAGAATGAGGCAAGAGCTGGTTCT
TCGGTCGGCGTCTCCGACCTGAAGGTAATGGGCGACCCCTCCCTCGCCTC
GCAAGACCAGACCGTCGAAGAGTACCTGAAAGTGCACTGCAGTCAATTAG
TAGGAGACTTGAATGCGCATGCTGAGAGCCTCATCAAGAATTTGCAGCAC
GAGCTCGAAAGAGGCAAGGCGGAAATTATGGGCATGGTTCAGGGAAACAC
GG
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Synonyms
Publications