EWM28640.1, cds2036 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|585111059|gb|EWM28640.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 551.206 bits (1419), Expect = 0.000e+0 Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0
Query: 1 MDVENEARAGSSVGVSDLKVMGDPSLASQDQTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMGMVQGNTVGPTSSDAGDSGASTSTATGNVPARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRLVQSKGRKEFVVGRSTGKKVKEHGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEERVPTRVQTGDVLKDRPGVCWADRSRQRLEQGGERGLSPAQREGVQPVIIPELDRCTIGKDKQREEGQE 270
MDVENEARAGSSVGVSDLKVMGDPSLASQDQTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMGMVQGNTVGPTSSDAGDSGASTSTATGNVPARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRLVQSKGRKEFVVGRSTGKKVKEHGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEERVPTRVQTGDVLKDRPGVCWADRSRQRLEQGGERGLSPAQREGVQPVIIPELDRCTIGKDKQREEGQE
Sbjct: 1 MDVENEARAGSSVGVSDLKVMGDPSLASQDQTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMGMVQGNTVGPTSSDAGDSGASTSTATGNVPARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRLVQSKGRKEFVVGRSTGKKVKEHGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEERVPTRVQTGDVLKDRPGVCWADRSRQRLEQGGERGLSPAQREGVQPVIIPELDRCTIGKDKQREEGQE 270
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|299471773|emb|CBN76994.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 78.5666 bits (192), Expect = 7.719e-13 Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 0
Query: 119 VILTVTDGPYAGTVFRLVQSKGRKEFVVGRSTGKKVKEHGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEERVPTRVQTGDVL 214
V L+++ GPY G+VF + + +VGRSTGKK K HG S+ +D EVS HG F +GG+V Y D GSTNG+ ++G +E ++ V G L
Sbjct: 391 VALSISGGPYDGSVFEITVEEDGDARLVGRSTGKKFKNHGISLRRDSEVSITHGMF-MNSGGRVTYMDNGSTNGTEVDGEWVEPKIAYGVVAGSTL 485
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|1173943176|gb|OQR92061.1| (hypothetical protein ACHHYP_04111 [Achlya hypogyna]) HSP 1 Score: 70.4774 bits (171), Expect = 2.005e-11 Identity = 43/98 (43.88%), Postives = 53/98 (54.08%), Query Frame = 0
Query: 110 GPPGSTFLTVILTVTDGPYAGTVFRLVQSKGRKEFV-VGRSTGKKVKEH-GASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEERVP 205
GPP L V++T T G Y G F L S +GRS+GKK K G S+P+DPEVST H GKV + D+ STNG+ IN L+ R P
Sbjct: 34 GPPRQ--LKVMVTCTKGYYQGQTFELHLSLDTNPICHLGRSSGKKYKSPLGLSLPKDPEVSTTHAELRLSDEGKVYFTDVNSTNGTTINDKALKPRKP 129
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|698781585|ref|XP_009823836.1| (hypothetical protein H257_02047 [Aphanomyces astaci] >gi|574121560|gb|ETV87037.1| hypothetical protein H257_02047 [Aphanomyces astaci]) HSP 1 Score: 72.4034 bits (176), Expect = 2.588e-11 Identity = 56/192 (29.17%), Postives = 88/192 (45.83%), Query Frame = 0
Query: 31 QTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIM-GMVQGNTVGPTSSDAG-------DSGASTSTATGNVPARSVAASTGPPGSTF---LTVILTVTDGPYAGTVFRLVQSKGRKEFV-VGRSTGKKVKEH-GASMPQDPEVSTVHGRFECRAGGKVMY-EDLGSTNGSFINGACLEERVPTRV 208
QT+ EYL+ + + +L + + + E + K +I + +G P++ + S T + AAS+ P T+ T+ + T G Y+G F LV S +GRS+GKK K G S+P+DPE+ST H + +Y D STNG+ +NG L+ RVP R+
Sbjct: 54 QTMIEYLEAQRNLALHNLQTQRDKALAQFREEAAQAKKKIFDSLAEGKEEAPSADSSSLSHEPPLPSAVKDETQLQHQTTSPAAASSSKPQRTYGEKKTIHIACTSGVYSGQHFTLVLSTDVNRVCHIGRSSGKKYKAPLGLSLPKDPEISTTHAEMRWSSENDHIYLADQNSTNGTKLNGRNLKARVPVRL 245
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|1210530741|dbj|GAX10692.1| (hypothetical protein FisN_14Lh207 [Fistulifera solaris]) HSP 1 Score: 70.4774 bits (171), Expect = 4.541e-11 Identity = 60/201 (29.85%), Postives = 90/201 (44.78%), Query Frame = 0
Query: 20 VMGDPSLASQDQTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMG----MVQGNTVGPTSSDAGDS-GASTSTATGNVPARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRLVQSKGRKEFVVGRSTGKKVKEHGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEERVPTRVQTGDVLK 215
++ D + TVE+ L Q + + AE +K LQ ELE G E+ MV+ S++A D GAS T+ + + G +AG+ F V K K ++GRS GKK K++G S+ D EVST HG+F G + D GS+NG+ I ++ VP ++ G +K
Sbjct: 5 LLNDVPFPTGKSTVEDALNFVLQQALAKTDKKAEMALKVLQQELEDGVRELYNCHEQMVENCENSKPSTEAKDKKGASHKD----------------------TLKIDIISGEHAGSSF-FVTPKPNKPCLLGRSKGKKFKQNGVSLCHDLEVSTTHGKFTVE-NGTFYFTDTGSSNGTLIRDEDVQVDVPYPLEDGIEMK 181
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|673023066|ref|XP_008865494.1| (hypothetical protein H310_03423 [Aphanomyces invadans] >gi|574478722|gb|ETW05717.1| hypothetical protein H310_03423 [Aphanomyces invadans]) HSP 1 Score: 71.633 bits (174), Expect = 4.701e-11 Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 0
Query: 31 QTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMG-MVQGNTVGPTSSDAGDSGASTSTATGNVPARSVAASTGPPGST---------FLTVILTVTDGPYAGTVFRLVQS-KGRKEFVVGRSTGKKVKE-HGASMPQDPEVSTVHGRFECRAGGKVMY-EDLGSTNGSFINGACLEERVPTRV 208
QTV E+L+ Q V + E LI + E + K +I+ + +G+ + + +D D + + R V S G+T T+ + T G Y+G F LV + + +GRS+GKK K HG S+P+DPE+ST H A +Y D STNG+ +NG L+ RV R+
Sbjct: 55 QTVMEFLEAQRDQAVQTIRTRGEELITAFREEAAQAKKKILASLSEGSELRSSPTD--DITLTQEPSLVADVKREVKQSVDVLGTTVHERRSYGEMKTIHIVCTGGVYSGQRFTLVLAMDANRTCHIGRSSGKKYKAPHGLSLPKDPEISTSHAELRWNADDDHIYITDQNSTNGTKLNGRNLKSRVAVRL 243
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|301120348|ref|XP_002907901.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102932|gb|EEY60984.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 70.0922 bits (170), Expect = 5.182e-11 Identity = 55/185 (29.73%), Postives = 79/185 (42.70%), Query Frame = 0
Query: 33 VEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMGMVQGNTVGPTSSDAGDSGASTSTATGNVPARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRL-VQSKGRKEFVVGRSTGKKVKE-HGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEERVPTRVQTGDVLK 215
V+++L C L A+ L+ E+E GK ++ DA ++ GN R+ T+ + GPY G F + V K VGRSTG+K + G SMP+D E+ST H + GKV + D STNGS I+ LE +VP + T +K
Sbjct: 4 VQDFLLRDCKASSKKLVEQAKMRAAELRQEMEEGKKALL-------------DALEAEKENLDEDGNAIPRA------------FTISVRSITGPYKGRKFSMEVDVKRHSSCFVGRSTGRKYRSPRGLSMPKDSELSTTHAEIKMETSGKVFFIDSESTNGSRIDDVGLEPKVPYELTTSKPIK 163
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|813112970|ref|XP_012195298.1| (hypothetical protein SPRG_19103 [Saprolegnia parasitica CBS 223.65] >gi|641540504|gb|KDO34286.1| hypothetical protein SPRG_19103 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 69.707 bits (169), Expect = 8.504e-11 Identity = 50/178 (28.09%), Postives = 77/178 (43.26%), Query Frame = 0
Query: 30 DQTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMGMVQGNTVGPTSSDAGDSGASTSTATGNVPARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRLVQSKGRKEFV-VGRSTGKKVK-EHGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEERVP 205
+QTV E+L + + + + AH + I + E ++ + + V T + A PP +TV TDG Y F+L+ + + +GRS+GKK K HG S+P+DPEVST H GKV D+ STNG+ +N ++ P
Sbjct: 22 NQTVSEFLTTNLDEAIAKVEAHGKKTIAKFRKEAKKARENLEAAVD------------------LTVPDDDAVVDDEAKKAPPRRYNVTV--QCTDGFYKNQQFKLLLALDTNPVIHIGRSSGKKYKLPHGLSLPKDPEVSTTHAELRLGDDGKVYITDVNSTNGTSVNDNPIKPHKP 179
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|635366751|emb|CCI44987.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 69.3218 bits (168), Expect = 1.265e-10 Identity = 51/175 (29.14%), Postives = 75/175 (42.86%), Query Frame = 0
Query: 31 QTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMGMVQGNTVGPTS-SDAGDSGASTSTATGNVPARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRLV------QSKGRKEFVVGRSTGKKVKE-HGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFING 197
Q+VEEY++ C++ + E + L+ K +I+ + + S SD D +++ GPY G F L QS+ ++GRSTGKK K G S+P+D E+ST H F GK+ + DL STNGSF+NG
Sbjct: 27 QSVEEYIQAECAKQCKVIEKEVEEKCRELRQVFLDSKQKILHASEADKENEQSVSDGYD------------------------------LMVHCQSGPYRGKDFHLKLHQSANQSQESAVCLIGRSTGKKFKPPLGISLPKDSEISTTHAEFRLDPFGKIYFTDLDSTNGSFVNG 171
BLAST of EWM28640.1 vs. NCBI_GenBank
Match: gi|1173960496|gb|OQS06616.1| (hypothetical protein THRCLA_20335 [Thraustotheca clavata]) HSP 1 Score: 69.3218 bits (168), Expect = 1.839e-10 Identity = 51/176 (28.98%), Postives = 77/176 (43.75%), Query Frame = 0
Query: 30 DQTVEEYLKVHCSQLVGDLNAHAESLIKNLQHELERGKAEIMGMVQGNTVGPTSSDAGDSGASTSTATGNVPARSVAASTGPPGSTFLTVILTVTDGPYAGTVFRLVQSKGRKEF-VVGRSTGKKVK-EHGASMPQDPEVSTVHGRFECRAGGKVMYEDLGSTNGSFINGACLEER 203
+ TV EYL ++ V ++AH + I+ E ++ K T+ + D G S P + + V + T G Y+G F++ S +GRS+GKK K G S+P+DPEVST H GK+ D+ STNG+ ING ++ R
Sbjct: 39 NMTVREYLTKCLNEAVEKVDAHGKKAIEKFHAEADKAK---------KTLETYMIETEDKGESEEVEDKEEPLKYI-------------VKVKCTKGYYSGQEFKINLSIEDNPICYIGRSSGKKYKLPKGLSLPKDPEVSTTHAELRLSTDGKITITDVNSTNGTIINGTTIKPR 192 The following BLAST results are available for this feature:
BLAST of EWM28640.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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