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Properties
| Property Name | Value |
|---|
| Product | uncharacterized protein |
| Orig transcript id | gnl|cribi|Naga_100177g3.1016.mrna |
| Orig protein id | gnl|cribi|Naga_100177g3.1016 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:718877..720184 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2023 ID=rna2023|Name=rna2023|organism=Nannochloropsis gaditana|type=mRNA|length=693bp
ATGACATATTCGCAACGAGGTACAATGAAAGAATTTCAAATAAACGGCTA
TCGTAAGTGGAGGAGCTTCGAAAAGTCTAATTCGAATCTAAAGGGAGAAC
AATGTAGGCCAGAAAGTGCGCTGAAAATGGGCAGGCATGGTGTGGTCGTT
GTGTATTCGAAAGATGGCATGCGCACACTTACCTATTGCCTACCTGCTGG
GAGCGAAGGTGAAGCGCCTCCCACACCTGGATCGAGTCTGCATTACCTTT
ACGAGCACTTGAGAGCCAAGCCTGCAGCCAGGATCCAGTGGAAAAAGATC
ATGATTAGATTGTCTGAAGACACTCGGGAAGCATTGCACGGTACGACACG
AACAACGCGGGGAAACGTAGAGAAGGAGAAACGACGGATGAAAGCTGCGG
AATATCAAGAGCTAAGGCTGTACAAAGTGGCGTCCCTGTTGGGGTCATCC
CTGTCTCTCGATAGTCCGACACAGAGAAGACGGCAGGTGAGAGCAGCCAG
AGGTAGAAGAGGGGCGGAGCACTGCCGTGGATTACGGCAAGGATCAAAGA
TTATTCCTCACTTAAAGGAAGAGTGCCCGCCTACAGAGCTCACGTTAAGG
TTAAGCACGACCGGCAGCAGCAGTTTTTGCGCCGACCAGAGGAAAGAAAA
GGCCAATTTCGATTGTCAAGAGCGTTGTGACAAAAAGAAGTGA back to topprotein sequence of rna2023 >rna2023-protein ID=rna2023-protein|Name=rna2023|organism=Nannochloropsis gaditana|type=polypeptide|length=358bp
MPMARFSRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYA
AGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGA
WTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHT
AQYAMGEATSPGEALAACLQGEAEERDGGGGRASCEQGAVEGEGSVRRGR
EEKEDADSQMHVAGENEDSASSAGGGPADAGVSGSVGQLPFSLSTSPVQQ
QQQQQRQQQQQERQEQPGARLGEPQKCSEEDEGGEERGWDSDVSICGDGA
SSSSSCTLFDSEVEDIEERHVREGREWGIVQAQARGEAFLTSGEGMPPRK
RARASWTS back to topmRNA from alignment at CM002458.1:718877..720184- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2023 ID=rna2023|Name=rna2023|organism=Nannochloropsis gaditana|type=mRNA|length=1308bp|location=Sequence derived from alignment at CM002458.1:718877..720184- (Nannochloropsis gaditana)
ATGCCTATGGCTCGTTTTAGCCGGCTTGCACGGGAGCTGGAGCTGCTTCG
AAATGACCCTCCCCCAGGCGTGGCGGCCTGGCCCGTGGATGAAGCAAATT
TGTCCCGTTTTCATGCCAGTGAGTAATGATCTGTGATTAAATGCCGGGGG
ATACAAATTTTAGAATTGCCTTGGGTTTGGGTGTGGAAATGGTTTTCTCA
CCACTCGATGAGGAGATCCTGCAAGTCATCGCTCCAATCGTGAAGCAGAC
TTAGCGTGCTCTCGTCACTTTCCCCATTTGAGTTGTCGTCTCTTAATTGG
TACGGAAAATGTACCCTATGCATTTTCACCTCTTCCTTGCACATTCCAGG
CATCCGAGGGCCAGAGTCAACGCCGTACGCCGCCGGACTCTTCAGGCTCG
AGCTCGAGGTCTCCCCGCGCTACCCCTTTGAGCCGCCCACCGTCCGCTTC
TTGACCCCTGTCTTCCACCCAAACGTGGACGACAGAGGCCGCATCTGCCT
CGATTCATTAAAGGCCCAGCCCCAGGGGGCATGGACGCCATCCTTGAACA
TCCCCACGCTCCTGACGACCCTTCGTCTGCTCCTCGCCCACCCGAACGCC
GACGACGGCCTAGCGCCTGAACCCACCGCTCTCTATCAGAGAGACTTGCG
TGGCTTCGAACAGCGTGCACGTGAGCACACGGCCCAATATGCGATGGGCG
AGGCAACGTCCCCCGGGGAGGCATTGGCGGCCTGCCTACAGGGGGAAGCG
GAGGAGAGGGACGGGGGGGGGGGTCGCGCCTCATGTGAGCAAGGGGCTGT
CGAAGGTGAGGGGAGCGTGCGGAGAGGAAGGGAGGAAAAGGAGGACGCGG
ATAGCCAGATGCACGTCGCGGGCGAAAACGAGGACTCAGCCTCCTCCGCG
GGTGGCGGGCCGGCGGATGCGGGGGTATCTGGCAGCGTTGGACAGCTGCC
ATTTTCCTTGTCCACTAGCCCGGTGCAACAACAGCAGCAGCAACAACGGC
AGCAGCAGCAACAAGAACGACAGGAACAGCCTGGCGCGCGTTTGGGAGAG
CCGCAAAAATGTAGCGAGGAGGATGAGGGAGGAGAGGAACGGGGCTGGGA
CAGTGACGTGAGCATATGCGGGGATGGTGCCTCCTCCTCCTCCTCCTGCA
CCCTTTTCGACTCCGAAGTCGAAGATATTGAGGAAAGACACGTTCGTGAG
GGCCGAGAGTGGGGGATAGTACAGGCTCAGGCGCGGGGGGAGGCTTTCTT
GACGAGCGGTGAGGGCATGCCGCCGCGGAAGCGCGCGCGTGCTAGTTGGA
CATCGTAG back to topCoding sequence (CDS) from alignment at CM002458.1:718877..720184- >rna2023 ID=rna2023|Name=rna2023|organism=Nannochloropsis gaditana|type=CDS|length=2154bp|location=Sequence derived from alignment at CM002458.1:718877..720184- (Nannochloropsis gaditana)
GCATCCGAGGGCCAGAGTCAACGCCGTACGCCGCCGGACTCTTCAGGCTC
GAGCTCGAGGTCTCCCCGCGCTACCCCTTTGAGCCGCCCACCGTCCGCTT
CTTGACCCCTGTCTTCCACCCAAACGTGGACGACAGAGGCCGCATCTGCC
TCGATTCATTAAAGGCCCAGCCCCAGGGGGCATGGACGCCATCCTTGAAC
ATCCCCACGCTCCTGACGACCCTTCGTCTGCTCCTCGCCCACCCGAACGC
CGACGACGGCCTAGCGCCTGAACCCACCGCTCTCTATCAGAGAGACTTGC
GTGGCTTCGAACAGCGTGCACGTGAGCACACGGCCCAATATGCGATGGGC
GAGGCAACGTCCCCCGGGGAGGCATTGGCGGCCTGCCTACAGGGGGAAGC
GGAGGAGAGGGACGGGGGGGGGGGTCGCGCCTCATGTGAGCAAGGGGCTG
TCGAAGGTGAGGGGAGCGTGCGGAGAGGAAGGGAGGAAAAGGAGGACGCG
GATAGCCAGATGCACGTCGCGGGCGAAAACGAGGACTCAGCCTCCTCCGC
GGGTGGCGGGCCGGCGGATGCGGGGGTATCTGGCAGCGTTGGACAGCTGC
CATTTTCCTTGTCCACTAGCCCGGTGCAACAACAGCAGCAGCAACAACGG
CAGCAGCAGCAACAAGAACGACAGGAACAGCCTGGCGCGCGTTTGGGAGA
GCCGCAAAAATGTAGCGAGGAGGATGAGGGAGGAGAGGAACGGGGCTGGG
ACAGTGACGTGAGCATATGCGGGGATGGTGCCTCCTCCTCCTCCTCCTGC
ACCCTTTTCGACTCCGAAGTCGAAGATATTGAGGAAAGACACGTTCGTGA
GGGCCGAGAGTGGGGGATAGTACAGGCTCAGGCGCGGGGGGAGGCTTTCT
TGACGAGCGGTGAGGGCATGCCGCCGCGGAAGCGCGCGCGTGCTAGTTGG
ACATCGTAGATGCCTATGGCTCGTTTTAGCCGGCTTGCACGGGAGCTGGA
GCTGCTTCGAAATGACCCTCCCCCAGGCGTGGCGGCCTGGCCCGTGGATG
AAGCAAATTTGTCCCGTTTTCATGCCAGCATCCGAGGGCCAGAGTCAACG
CCGTACGCCGCCGGACTCTTCAGGCTCGAGCTCGAGGTCTCCCCGCGCTA
CCCCTTTGAGCCGCCCACCGTCCGCTTCTTGACCCCTGTCTTCCACCCAA
ACGTGGACGACAGAGGCCGCATCTGCCTCGATTCATTAAAGGCCCAGCCC
CAGGGGGCATGGACGCCATCCTTGAACATCCCCACGCTCCTGACGACCCT
TCGTCTGCTCCTCGCCCACCCGAACGCCGACGACGGCCTAGCGCCTGAAC
CCACCGCTCTCTATCAGAGAGACTTGCGTGGCTTCGAACAGCGTGCACGT
GAGCACACGGCCCAATATGCGATGGGCGAGGCAACGTCCCCCGGGGAGGC
ATTGGCGGCCTGCCTACAGGGGGAAGCGGAGGAGAGGGACGGGGGGGGGG
GTCGCGCCTCATGTGAGCAAGGGGCTGTCGAAGGTGAGGGGAGCGTGCGG
AGAGGAAGGGAGGAAAAGGAGGACGCGGATAGCCAGATGCACGTCGCGGG
CGAAAACGAGGACTCAGCCTCCTCCGCGGGTGGCGGGCCGGCGGATGCGG
GGGTATCTGGCAGCGTTGGACAGCTGCCATTTTCCTTGTCCACTAGCCCG
GTGCAACAACAGCAGCAGCAACAACGGCAGCAGCAGCAACAAGAACGACA
GGAACAGCCTGGCGCGCGTTTGGGAGAGCCGCAAAAATGTAGCGAGGAGG
ATGAGGGAGGAGAGGAACGGGGCTGGGACAGTGACGTGAGCATATGCGGG
GATGGTGCCTCCTCCTCCTCCTCCTGCACCCTTTTCGACTCCGAAGTCGA
AGATATTGAGGAAAGACACGTTCGTGAGGGCCGAGAGTGGGGGATAGTAC
AGGCTCAGGCGCGGGGGGAGGCTTTCTTGACGAGCGGTGAGGGCATGCCG
CCGCGGAAGCGCGCGCGTGCTAGTTGGACATCGTAGATGCCTATGGCTCG
TTTTAGCCGGCTTGCACGGGAGCTGGAGCTGCTTCGAAATGACCCTCCCC
CAGGCGTGGCGGCCTGGCCCGTGGATGAAGCAAATTTGTCCCGTTTTCAT
GCCA back to top
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