EWM28659.1, cds2015 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|585111080|gb|EWM28659.1| (uncharacterized protein Naga_100177g3 [Nannochloropsis gaditana]) HSP 1 Score: 720.694 bits (1859), Expect = 0.000e+0 Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0 Query: 1 MPMARFSRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGEATSPGEALAACLQGEAEERDGGGGRASCEQGAVEGEGSVRRGREEKEDADSQMHVAGENEDSASSAGGGPADAGVSGSVGQLPFSLSTSPVQQQQQQQRQQQQQERQEQPGARLGEPQKCSEEDEGGEERGWDSDVSICGDGASSSSSCTLFDSEVEDIEERHVREGREWGIVQAQARGEAFLTSGEGMPPRKRARASWTS 358 MPMARFSRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGEATSPGEALAACLQGEAEERDGGGGRASCEQGAVEGEGSVRRGREEKEDADSQMHVAGENEDSASSAGGGPADAGVSGSVGQLPFSLSTSPVQQQQQQQRQQQQQERQEQPGARLGEPQKCSEEDEGGEERGWDSDVSICGDGASSSSSCTLFDSEVEDIEERHVREGREWGIVQAQARGEAFLTSGEGMPPRKRARASWTS Sbjct: 1 MPMARFSRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGEATSPGEALAACLQGEAEERDGGGGRASCEQGAVEGEGSVRRGREEKEDADSQMHVAGENEDSASSAGGGPADAGVSGSVGQLPFSLSTSPVQQQQQQQRQQQQQERQEQPGARLGEPQKCSEEDEGGEERGWDSDVSICGDGASSSSSCTLFDSEVEDIEERHVREGREWGIVQAQARGEAFLTSGEGMPPRKRARASWTS 358
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|298711329|emb|CBJ32475.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 199.519 bits (506), Expect = 1.792e-57 Identity = 87/163 (53.37%), Postives = 116/163 (71.17%), Query Frame = 0 Query: 6 FSRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGEATSPGEALAAC 168 RL +EL++L ++PPPGV AWPVD+ ++ A I+GPE TPY G F LEL++ RYPFEPP VRF+TP++HPN+D GRICLD+LK +P G+W PS+N+PTLLTT+RLL+AHPN DDGL P+ T L+ ++ F AR H ++A + SP AA Sbjct: 6 LVRLGKELKMLTDEPPPGVCAWPVDDC-ITHLQAQIQGPEDTPYERGTFLLELKIPDRYPFEPPKVRFVTPIYHPNIDSGGRICLDTLKMRPAGSWAPSMNVPTLLTTIRLLMAHPNGDDGLMPDITELFLKNPSRFADVARAHVEEHARQDKPSPATGKAAA 167
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|698798960|ref|XP_009832509.1| (hypothetical protein H257_08368 [Aphanomyces astaci] >gi|574112680|gb|ETV78172.1| hypothetical protein H257_08368 [Aphanomyces astaci]) HSP 1 Score: 192.2 bits (487), Expect = 3.050e-56 Identity = 86/170 (50.59%), Postives = 117/170 (68.82%), Query Frame = 0 Query: 7 SRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGEATSPGEALAACLQGEAEER 176 +R+ +E+E+L NDPP G+ AWP D L A I+GPE TPY G+F L + + RYPFEPP V+F+TP+FHPN+D+ GRICLD+LK QP+G+W PS+N+ TLLTT+RLL+ PN DDGL PE T L++++ F +A TAQ+A ++P AL A E E + Sbjct: 6 ARMRKEMEMLENDPPHGICAWPKDN-KLDELEAQIQGPEGTPYEKGIFLLSITIPERYPFEPPKVQFVTPIFHPNIDNAGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMTDPNPDDGLMPEITDLFKQNHALFVSKATAMTAQHANASHSTPARALHAAAHNEDESK 174
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|1173942281|gb|OQR91306.1| (ubiquitin-conjugating enzyme E2 T-like [Thraustotheca clavata]) HSP 1 Score: 192.2 bits (487), Expect = 3.285e-56 Identity = 87/148 (58.78%), Postives = 113/148 (76.35%), Query Frame = 0 Query: 7 SRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYA 154 SR+ +ELE+L NDPP GV AW +DE L A I+GPE TPY G+F LE+++ RYPFEPP V FLTP+FHPN+D+ GRICLD+LK QP+G+W PS+N+ TLLTT+RLL+A PN DDGL PE T L++++ F +A+E TAQ+A Sbjct: 6 SRMRKELEMLENDPPHGVCAWTIDE-KLDDLQAQIQGPEGTPYENGVFLLEIKIPERYPFEPPKVHFLTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHALFVTKAKEMTAQHA 152
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|813180573|ref|XP_012206095.1| (hypothetical protein SPRG_09951 [Saprolegnia parasitica CBS 223.65] >gi|641528945|gb|KDO23143.1| hypothetical protein SPRG_09951 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 188.734 bits (478), Expect = 5.315e-55 Identity = 88/164 (53.66%), Postives = 115/164 (70.12%), Query Frame = 0 Query: 7 SRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGE-ATSPGEALAACL 169 SR+ +ELE+L DPP G+ AW VD+ L A I+GPE TPY G+F LE++V RYPFEPP V F TP+FHPN+D+ GRICLD+LK QP+G+W PS+N+ TLLTT+RLL+A PN DDGL PE T LY+++ F +A+E TAQ+A + P C+ Sbjct: 6 SRMRKELEMLETDPPHGICAWSVDD-KLDDLQAQIQGPEGTPYENGVFLLEIKVPERYPFEPPKVHFTTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLYKQNHALFVTKAKEMTAQHATAQFVIKPAATPKVCI 168
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|669141714|ref|XP_008606419.1| (hypothetical protein SDRG_02601 [Saprolegnia diclina VS20] >gi|530741703|gb|EQC39945.1| hypothetical protein SDRG_02601 [Saprolegnia diclina VS20]) HSP 1 Score: 187.963 bits (476), Expect = 1.204e-54 Identity = 85/151 (56.29%), Postives = 112/151 (74.17%), Query Frame = 0 Query: 7 SRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGE 157 SR+ +ELE+L DPP G+ AW VD+ L A I+GPE TPY G+F LE++V RYPFEPP V F TP+FHPN+D+ GRICLD+LK QP+G+W PS+N+ TLLTT+RLL+A PN DDGL PE T L++++ F +A+E TAQ+A + Sbjct: 6 SRMRKELEMLETDPPHGICAWSVDD-KLDDLQAQIQGPEGTPYENGVFLLEIKVPERYPFEPPKVHFTTPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHELFVTKAKEMTAQHATAQ 155
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|1173945748|gb|OQR94341.1| (ubiquitin-conjugating enzyme E2T-like [Achlya hypogyna]) HSP 1 Score: 187.578 bits (475), Expect = 1.548e-54 Identity = 89/172 (51.74%), Postives = 120/172 (69.77%), Query Frame = 0 Query: 7 SRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGEATSPGEALAACLQGEAEERDG 178 SR+ +ELE+L +DPP G+ AW VD+ L A I+GPE TPY G+F LE+++ RYPFEPP V F+TP+FHPN+D+ GRICLD+LK QP+G+W PS+N+ TLLTT+RLL+A PN DDGL PE T L++++ F +A+E T Q+A + A A L EA + D Sbjct: 6 SRMRKELEMLESDPPHGICAWSVDD-KLDDLQAQIQGPEGTPYENGVFLLEIKIPERYPFEPPKVHFITPIFHPNIDNGGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLFKQNHAHFVTKAKEMTTQHAKAQFDVKRSAKPA-LPSEAHDDDS 175
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|953500931|emb|CEG37964.1| (ubiquitin-conjugating enzyme e2 t-like [Plasmopara halstedii]) HSP 1 Score: 186.422 bits (472), Expect = 5.412e-54 Identity = 83/147 (56.46%), Postives = 109/147 (74.15%), Query Frame = 0 Query: 8 RLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYA 154 R+ +E+ +L +DPP GV+AWP D+ L R A I GPE +PY GLF LE+++ RYPFEPP VRFLTP++HPN+DD GRICLD+LK QP+G+W PS+NI TLLTT+RLL+A PNADDGL P+ +++ + F A E T Q+A Sbjct: 4 RMRKEIAMLESDPPFGVSAWPKDD-QLDRLEAQIMGPEGSPYERGLFNLEIDIPERYPFEPPKVRFLTPIYHPNIDDGGRICLDTLKMQPKGSWLPSVNICTLLTTIRLLMAEPNADDGLMPDIADIFKHNRELFNSNASEMTLQHA 149
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|673037506|ref|XP_008872714.1| (hypothetical protein H310_08653 [Aphanomyces invadans] >gi|574471510|gb|ETV98517.1| hypothetical protein H310_08653 [Aphanomyces invadans]) HSP 1 Score: 186.037 bits (471), Expect = 6.469e-54 Identity = 83/153 (54.25%), Postives = 110/153 (71.90%), Query Frame = 0 Query: 7 SRLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGEAT 159 +R+ +E+E+L NDPP G+ AWP D L A I+GPE TPY G+F L + + RYPFEPP V+F TP+FHPN+D+ GRICLD+LK QP+G+W PS+N+ TLLTT+RLL+A PN DDGL PE T LY+++ F +A TAQ+A +T Sbjct: 6 ARMRKEMEMLENDPPHGICAWPKDN-KLDELEAQIQGPEGTPYEKGIFLLSILIPERYPFEPPKVQFTTPIFHPNIDNAGRICLDTLKMQPKGSWMPSVNLSTLLTTIRLLMAEPNPDDGLMPEITDLYKQNHALFVSKATAMTAQHATTSST 157
BLAST of EWM28659.1 vs. NCBI_GenBank
Match: gi|1214695546|gb|OWZ09299.1| (Ubiquitin-conjugating enzyme E2 [Phytophthora megakarya]) HSP 1 Score: 186.422 bits (472), Expect = 1.073e-53 Identity = 82/175 (46.86%), Postives = 117/175 (66.86%), Query Frame = 0 Query: 8 RLARELELLRNDPPPGVAAWPVDEANLSRFHASIRGPESTPYAAGLFRLELEVSPRYPFEPPTVRFLTPVFHPNVDDRGRICLDSLKAQPQGAWTPSLNIPTLLTTLRLLLAHPNADDGLAPEPTALYQRDLRGFEQRAREHTAQYAMGEATSPGEALAACLQGEAEERDGGGGR 182 R+ +E+ +L +DPP GV+AWP D+ + R A I GP+ +PY G+F L++E+ RYPFEPP V F+TP++HPN+DD GRICLD+LK QP+G+W PS+NI TLLTT+RLL+A PNADDGL PE +++ + F ++A E T Q+A ++ G +D G + Sbjct: 7 RMRKEIAMLESDPPFGVSAWPKDD-QIDRLQAQILGPDGSPYEKGVFHLDIEIPERYPFEPPKVHFVTPIYHPNIDDAGRICLDTLKMQPKGSWLPSVNISTLLTTIRLLMAEPNADDGLMPEIADVFKHNRELFNKKATELTIQHAQDTKAHQRKSATDTTAGSGNLKDDDGEK 180 The following BLAST results are available for this feature:
BLAST of EWM28659.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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