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Properties
Property Name | Value |
Product | methyltransferase-like protein 11a |
Orig transcript id | gnl|cribi|Naga_100002g5.4837.mrna |
Orig protein id | gnl|cribi|Naga_100002g5.4837 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:709626..711415 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2017 ID=rna2017|Name=rna2017|organism=Nannochloropsis gaditana|type=mRNA|length=2265bp ATGGGTCAAGATCAAAGCATTTCGAATCAGCAATATCCGTCTTCATCCTA TCCTGGTGCAGGTCGCTCCTCGGGAGGGACTAATGGCCCTGGTAATAGAC CAAGACCTACTCCACATGTGTCCCCATTTCAGCAGCCCGCGTACAATTCG CAACCAGGAGGAGGTCGCACAACTCGGACGGTGAACACAGAACCGGGGGC ATTTGAAATTCCTGGCCATCAGCGATCAACAGGTCAAATTCGGGCGCAAG TGCGGATACCGGCTGGGGTTCGACCTGGGCAGCACTTTGCCGTCCTGCTG GAGGGTCAACAGGTTATGGTCCGTTGCCCTGACCGCGCGTCTCCCGGCGA TCTGATCGCCATCGAATTTCAAGCTTCCACATTCATCGTGCAAGTGCCAG AGGGGGTACAGCCTGGCCAGACTTTCGACGTGATGGTCCGAGGGGCGAGG CAACGGGTCACGTGCCCGGACGGTGTCAGACCAGGGATGCAGATTCGATT CTCTCTCCCTCCCGCCTCTGACGGCGGGGGTTTGGGAGGAGCAGGGGGGC CTGGGGGAAGCACAGGTGGTGGAACGGGATCTTCAAACACGTCGGGACCA TCTCCTTTCGAGAAATTGTACGAGGTGGTGGTGCCGCAAGGTGTGCGGCC AGGGGAGCCCTTCGTCCTCTTGGCGGACGGCCAGCGCGTGACCGTCACCT GCCCGGTGGACGCGCGCCCAAACCAAAAGATACGCTTCAAGCTACCCATT GTCCCCACCAATGAGCAGCTCCAGGCGTACGAGATGCGGTATAACAAGGA CGGGTGGGTGCGGTGCCTGGGCCAGGACGTGAAGTTCCACTGGTTCAGGG TGGACGGCTCGAACCGGGAGCAGGGTGGCACTGCCAATGCCGTTGTGGGA GGTGTCGGAGGATCTCTCGGAAGACCAAAGAACGGGAAATTTTCCATTGA GAACACGGCCTTCGTACGGGCATTCAAAGGGCCTCCCCAGTCGCCAGACC TCGTGCTGCTCCCGCCCTCGGAGGTCTCTATCGACACGACGGTGCCAGGC ACCCGTTTGAACTTCCACACTCTCTCCCACGGGGCCCAACTTCCTTTCGA CAAGAAGATTGAATTCTTCCGTGAGCACTGCAACAGCCTCCGGACTCCGT GGGAGAGGGGACACATGGAGATTAGGGTGCGACGCGCGCACCTCCTGGCT GACTCCTTGATGGCCTTCGAGGGGATCAGCACAGCCAACATGCGAAAGAT TTTCCGCTTTGAGTTTTTGGGGGAGCCGGGCATTGACGCCGGGGGAGTGG CTCGGGAATGGTACGACCAGGTGACTGACGCGCTCTTCAATCCAGACTTC GGGCTCTTCCAATACAGCGGAGTGGATCAGATGTGCATGCAGATCAGTGG GGCGTCCGGCTTGGTCGAGCCGCAACACCACCGGTACTTCCGTTTTCTGG GTCGTTTGTTGGGGAAGGCCCTGTTGGACGGACAGATCGTGCGGCACCAC CTGGTGCGGCCGGTGATCAAGCACATCTTGGGCTGGCCCGTGGTCCTGGC GGACATGGAGTACCTGGACGCGGAGACGCTGCAGAATCTGGGCAAACTCC AAGAGATGGATCCCTCCGTGCTTGGAGATCTGTGCCTGGATTTTACCGTC ACCGAGAACTTCCTAGGACAGTCCCATACGGTGGAGCTGGTCCCTGGCGG CGCTAATTTGACCCTGGGGCCAGAAAATCTCGACAAGTACTTGGAGGCGA ACCTGCGCTTTCGCCTGTGCGATAGGGTCAAGACTCAGCTCCGAGAATTG CTGCTGGGCTTTTACGAGTGCATGCCTGAGGCTCTTTTGTCTATATTCGA CTTTCAGCAGCTAGAGTTGCTGCTCTGCGGCATGCCCAATCTGGACATAG AGGACTGGTTAAGGAATACGGGCTATGGTGGGGAATTTGCAAGATTGGGT GCCCAGCATCGGGTGGTGCAATGGTTTTGGGAGGTAGTTCGCAACGACTT CGATCAGGAGCAGCGGGCGCGACTTCTTCAGTTTACGACAGGCACGTCAG GGGTACCTGCGCAGGGATTTGCATTTTTGCAAGGGAACGATGGCAATATC CGGAAGTTCACCATCAATAGCATCTCACTCGATCAATCAGTGTTCCCTCG GGCGCACACATGTTTCAATCGCATTGATCTCCCTTTGTATAAGACGAAAA AAGACCTGAAGGAACGCTTATCGCTTGCGATTCAAATGGAGTCATCGGGC TTCTCGATAGAGTAA back to topprotein sequence of rna2017 >rna2017-protein ID=rna2017-protein|Name=rna2017|organism=Nannochloropsis gaditana|type=polypeptide|length=372bp MCETGNQLAELVSKVEKHLGRIAKGNDTDGREYTSLSEMWATVGILEPSV ALKAGATRKRVAELVNGAADETASVPAWYTQAYSYWEAEGNCPPTIDGVL GGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLL PIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLR EQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGM QDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKD NCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELF PVIMFCFTAKKEASQSGEGWGP back to topmRNA from alignment at CM002458.1:709626..711415- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2017 ID=rna2017|Name=rna2017|organism=Nannochloropsis gaditana|type=mRNA|length=1790bp|location=Sequence derived from alignment at CM002458.1:709626..711415- (Nannochloropsis gaditana) TTTTTCTCGTAAACATCTCGTCGCACTCCGCTCCCTCTCAGTATCATCCT
GGGAGACTCAATCCCGAGCCTTCTTTCCGCATCCTGGTCACGCACAGGAC
AGGGGTAACCACGGCGGCAGAGGCAACCTCCCCGTGCTAGCCTCGGTTGG
ACTGTATCGACCACTCTTACTCCTACACTTGTGCCGCAGTTCGCCTGACA
AGTATCAAGTATTGAAATTGTGAAAATCTCGTACATTGGAAGTTCGACGA
TCGTTGGGAGGTGCAGCATGGTCGGCCTGACGTGATTCAAGAGCGTGGTT
TGCCCTCCTCTACCTGTGACCGCTTTTCAAGGGTGGGACACGGACCTTTT
TTCGAGACATCAATTCCAGAGATTTTTTTATCAAGCGATGTGTGAGACCG
GAAATCAATTGGCGGAGCTCGTGTCAAAAGTGGAAAAGCATCTAGGCAGG
ATAGCCAAGGGCAATGACACGGACGGGAGGGAGTACACGTCTTTGTCGGA
AATGTGGGCCACGGTAGGGATTTTGGAGCCTTCGGTAGCCCTCAAGGCGG
GTGCAACTCGGAAAAGAGTGGCTGAATTGGTGAACGGCGCAGCGGATGAA
ACGGCAAGCGTACCTGCATGGTACACACAGGCATATTCATATTGGGAAGC
CGAGGGAAACTGCCCTCCGACAATAGACGGAGTCCTAGGAGGCTTTGGCC
ACGTGTCAGGCACCGATATAGCAGGCTCGCGCCGGTTCTTAGAGGGTCGC
GTCAAGCCATTGCTGCCCGCAATGCGCCTAGAGAAAGCCGCGGACTGCGG
GGCCGGTATCGGGCGTGTGACCAAGCTCTTGCTCCTCCCCATCTTCGCGT
CCGTCGACCTGCTCGAGCCAAGTCCTCGCCTCCTGGCCGCCGCTCCCTCC
TTCATGTTCGGGCAAGAGGGACATCGTGCTGCCAGAATGGAGGCAGAGGT
CCTGCTTTCTGAAGGTGGCGAGGAGGAGAAGTTGCGGGAGCAAGCCGTGG
TAGGGATGCGGGGTCGCGAGGAGCCATATGGCAAGGCGGAAGATGCGGAC
CCGCGTGCCGGCTCACTGCCCACGCGCCAGCAGCAAGGGATGAAAGCTCC
ACCGGAGGCGCGTGTGCGGTACCTGTGCCTGGGCATGCAGGACTTCCAGC
CGGCGTCCGGGGTTGTGTACGACGTCGTCTGGATCCAGTGGTGTATCGGC
CACTTGCACGACCTGGACCTGGTTCGCTTCCTTGTCCGGATCAAGGCGGC
TCTGCGGCCGGAGACTGGCGCCGTGATCGTCAAAGACAACTGTTGCGATG
CCTCGGCGGACTTCGTCGTGGACACGGGGGATAGCAGCCTGACGCGCTCC
CCGGCCTATCTCAAGGCCTTGTTCGAGATCGCTGGGTATGATCTGAGGGT
GGAAGAAAGGCAACAGGGTTTTCCCGCGGAGCTCTTTCCTGTGATCATGT
TTTGCTTCACGGCGAAAAAGGAGGCTAGCCAGAGCGGGGAGGGCTGGGGC
CCATGAGCCTGGGAGGAAGTGTTCAGTTGTGGGGAACCTGTCCAGCGCGA
GGCTTTTAGACACACTTTGAGATGCCCATTCTCAATGCATCGTGCCCAGC
ATTCTTTACACGTTGCAATTACCCCCAAAGCAACAGCGACTTGCCACAAA
CCCCCCTACCGCGCGTGTCAGGGGCGGGCTGCGGTCTGTATTGCACATTT
TTTTTACCCCCCTCCCGAACGTTAAAGATCATTTGAACCACAGGGTCGGT
TTAAAACCAATACCAATCCCAAACATCCCTTACACTTTTG back to topCoding sequence (CDS) from alignment at CM002458.1:709626..711415- >rna2017 ID=rna2017|Name=rna2017|organism=Nannochloropsis gaditana|type=CDS|length=1119bp|location=Sequence derived from alignment at CM002458.1:709626..711415- (Nannochloropsis gaditana) ATGTGTGAGACCGGAAATCAATTGGCGGAGCTCGTGTCAAAAGTGGAAAA GCATCTAGGCAGGATAGCCAAGGGCAATGACACGGACGGGAGGGAGTACA CGTCTTTGTCGGAAATGTGGGCCACGGTAGGGATTTTGGAGCCTTCGGTA GCCCTCAAGGCGGGTGCAACTCGGAAAAGAGTGGCTGAATTGGTGAACGG CGCAGCGGATGAAACGGCAAGCGTACCTGCATGGTACACACAGGCATATT CATATTGGGAAGCCGAGGGAAACTGCCCTCCGACAATAGACGGAGTCCTA GGAGGCTTTGGCCACGTGTCAGGCACCGATATAGCAGGCTCGCGCCGGTT CTTAGAGGGTCGCGTCAAGCCATTGCTGCCCGCAATGCGCCTAGAGAAAG CCGCGGACTGCGGGGCCGGTATCGGGCGTGTGACCAAGCTCTTGCTCCTC CCCATCTTCGCGTCCGTCGACCTGCTCGAGCCAAGTCCTCGCCTCCTGGC CGCCGCTCCCTCCTTCATGTTCGGGCAAGAGGGACATCGTGCTGCCAGAA TGGAGGCAGAGGTCCTGCTTTCTGAAGGTGGCGAGGAGGAGAAGTTGCGG GAGCAAGCCGTGGTAGGGATGCGGGGTCGCGAGGAGCCATATGGCAAGGC GGAAGATGCGGACCCGCGTGCCGGCTCACTGCCCACGCGCCAGCAGCAAG GGATGAAAGCTCCACCGGAGGCGCGTGTGCGGTACCTGTGCCTGGGCATG CAGGACTTCCAGCCGGCGTCCGGGGTTGTGTACGACGTCGTCTGGATCCA GTGGTGTATCGGCCACTTGCACGACCTGGACCTGGTTCGCTTCCTTGTCC GGATCAAGGCGGCTCTGCGGCCGGAGACTGGCGCCGTGATCGTCAAAGAC AACTGTTGCGATGCCTCGGCGGACTTCGTCGTGGACACGGGGGATAGCAG CCTGACGCGCTCCCCGGCCTATCTCAAGGCCTTGTTCGAGATCGCTGGGT ATGATCTGAGGGTGGAAGAAAGGCAACAGGGTTTTCCCGCGGAGCTCTTT CCTGTGATCATGTTTTGCTTCACGGCGAAAAAGGAGGCTAGCCAGAGCGG GGAGGGCTGGGGCCCATGA back to top
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