EWM28718.1, cds2009 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|585111141|gb|EWM28718.1| (methyltransferase-like protein 11a [Nannochloropsis gaditana]) HSP 1 Score: 760.37 bits (1962), Expect = 0.000e+0 Identity = 372/372 (100.00%), Postives = 372/372 (100.00%), Query Frame = 0
Query: 1 MCETGNQLAELVSKVEKHLGRIAKGNDTDGREYTSLSEMWATVGILEPSVALKAGATRKRVAELVNGAADETASVPAWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMFCFTAKKEASQSGEGWGP 372
MCETGNQLAELVSKVEKHLGRIAKGNDTDGREYTSLSEMWATVGILEPSVALKAGATRKRVAELVNGAADETASVPAWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMFCFTAKKEASQSGEGWGP
Sbjct: 1 MCETGNQLAELVSKVEKHLGRIAKGNDTDGREYTSLSEMWATVGILEPSVALKAGATRKRVAELVNGAADETASVPAWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMFCFTAKKEASQSGEGWGP 372
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|568024189|gb|ETL98229.1| (hypothetical protein L917_04653 [Phytophthora parasitica] >gi|568054619|gb|ETM51398.1| hypothetical protein L914_04753 [Phytophthora parasitica] >gi|570332591|gb|ETO80539.1| hypothetical protein F444_04980 [Phytophthora parasitica P1976]) HSP 1 Score: 195.282 bits (495), Expect = 6.360e-57 Identity = 110/281 (39.15%), Postives = 146/281 (51.96%), Query Frame = 0
Query: 77 AWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMFCF 357
WY A+ YW+ E NCP T +GVLGGF HVSG DI SRRFL+ + P AADCGAGIGRV+KLLLLP+F VD++E SPRLL P ++ E RA ++R+ +G+ +D +P A S YD++W+QW + HL DLDLVR+L R K AL P G +++K+N S + +D DSS+TRS Y K++F+ AG L E RQ+ FP EL+PV M+
Sbjct: 31 TWYASAHKYWDDEANCPLTDNGVLGGFAHVSGVDIRESRRFLKHVRDTVRPEWVCNAAADCGAGIGRVSKLLLLPMFDHVDMVEQSPRLLRGVPQYLGADETLRA----------------RVRDLYCMGL----------QDFEPAAAS----------------------------------YDLIWMQWVLVHLTDLDLVRYLKRCKKALTP-NGFIVIKENVFQTSEPYDLDRDDSSITRSAVYYKSIFQQAGLTLLAERRQRHFPEELYPVKMYAL 250
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|1214707669|gb|OWZ19040.1| (hypothetical protein PHMEG_0006764 [Phytophthora megakarya]) HSP 1 Score: 194.512 bits (493), Expect = 1.110e-56 Identity = 108/279 (38.71%), Postives = 142/279 (50.90%), Query Frame = 0
Query: 77 AWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMF 355
WY A+ YW+ E NCP T DGVLGGF HVSG DI S RFL+ P A DCG GIGRVTKLLLLP+F VD++E SPRLL P ++ G+E K+R+ C+G+QDF+PA YD++W+QW + HL DLDL+ +L R K AL P G +++K+N + + +D DSS+TRS Y K++F+ AG L E RQ+ FP EL+PV M+
Sbjct: 24 TWYASAHDYWDDETNCPLTDDGVLGGFAHVSGVDIRESMRFLKHVRDSERPEWVCHAAVDCGTGIGRVTKLLLLPMFEHVDVVEQSPRLLRGVPQYV--------------------GDETKVRD-------------------------------------------LYCMGLQDFEPAPA-SYDLIWMQWVLVHLTDLDLIHYLKRCKKALTP-NGFIVIKENIFQTAEPYDLDRQDSSITRSGVYYKSIFQQAGLTLLAERRQRHFPEELYPVKMY 237
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|567966217|gb|ETK91670.1| (hypothetical protein L915_04801 [Phytophthora parasitica]) HSP 1 Score: 194.512 bits (493), Expect = 1.279e-56 Identity = 110/281 (39.15%), Postives = 146/281 (51.96%), Query Frame = 0
Query: 77 AWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMFCF 357
WY A+ YW+ E NCP T +GVLGGF HVSG DI SRRFL+ + P AADCGAGIGRV+KLLLLP+F VD++E SPRLL P ++ E RA ++R+ +G+ +D +P A S YD++W+QW + HL DLDLVR+L R K AL P G +++K+N S + +D DSS+TRS Y K++F+ AG L E RQ+ FP EL+PV M+
Sbjct: 31 TWYASAHKYWDDEANCPLTDNGVLGGFAHVSGVDIRESRRFLKHVRDTVRPEWVCNAAADCGAGIGRVSKLLLLPMFDHVDMVEQSPRLLRGVPQYLGAIETLRA----------------RVRDLYCMGL----------QDFEPAAAS----------------------------------YDLIWMQWVLVHLTDLDLVRYLKRCKKALTP-NGFIVIKENVFQTSEPYDLDRDDSSITRSAVYYKSIFQQAGLTLLAERRQRHFPEELYPVKMYAL 250
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|675186795|ref|XP_008902282.1| (hypothetical protein PPTG_09164 [Phytophthora parasitica INRA-310] >gi|566028876|gb|ETI51787.1| hypothetical protein F443_04935 [Phytophthora parasitica P1569] >gi|568097557|gb|ETN12299.1| hypothetical protein PPTG_09164 [Phytophthora parasitica INRA-310] >gi|570956546|gb|ETP21537.1| hypothetical protein F441_04938 [Phytophthora parasitica CJ01A1] >gi|570991787|gb|ETP49446.1| hypothetical protein F442_05001 [Phytophthora parasitica P10297] >gi|970652677|gb|KUF91296.1| N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Phytophthora nicotianae]) HSP 1 Score: 196.052 bits (497), Expect = 2.357e-56 Identity = 110/280 (39.29%), Postives = 146/280 (52.14%), Query Frame = 0
Query: 78 WYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMFCF 357
WY A+ YW+ E NCP T +GVLGGF HVSG DI SRRFL+ + P AADCGAGIGRV+KLLLLP+F VD++E SPRLL P ++ E RA ++R+ +G+ +D +P A S YD++W+QW + HL DLDLVR+L R K AL P G +++K+N S + +D DSS+TRS Y K++F+ AG L E RQ+ FP EL+PV M+
Sbjct: 97 WYASAHKYWDDEANCPLTDNGVLGGFAHVSGVDIRESRRFLKHVRDTVRPEWVCNAAADCGAGIGRVSKLLLLPMFDHVDMVEQSPRLLRGVPQYLGADETLRA----------------RVRDLYCMGL----------QDFEPAAAS----------------------------------YDLIWMQWVLVHLTDLDLVRYLKRCKKALTP-NGFIVIKENVFQTSEPYDLDRDDSSITRSAVYYKSIFQQAGLTLLAERRQRHFPEELYPVKMYAL 315
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|567994933|gb|ETL45080.1| (hypothetical protein L916_04747 [Phytophthora parasitica]) HSP 1 Score: 193.356 bits (490), Expect = 3.329e-56 Identity = 109/281 (38.79%), Postives = 146/281 (51.96%), Query Frame = 0
Query: 77 AWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMFCF 357
WY A+ YW+ E NCP T +GVLGGF HVSG DI SRRFL+ + P AADCGAGIGRV+KLLLLP+F +D++E SPRLL P ++ E RA ++R+ +G+ +D +P A S YD++W+QW + HL DLDLVR+L R K AL P G +++K+N S + +D DSS+TRS Y K++F+ AG L E RQ+ FP EL+PV M+
Sbjct: 31 TWYASAHKYWDDEANCPLTDNGVLGGFAHVSGVDIRESRRFLKHVRDTVRPEWVCNAAADCGAGIGRVSKLLLLPMFDHMDMVEQSPRLLRGVPQYLGAIETLRA----------------RVRDLYCMGL----------QDFEPAAAS----------------------------------YDLIWMQWVLVHLTDLDLVRYLKRCKKALTP-NGFIVIKENVFQTSEPYDLDRDDSSITRSAVYYKSIFQQAGLTLLAERRQRHFPEELYPVKMYAL 250
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|673038508|ref|XP_008873215.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574471332|gb|ETV98340.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 189.889 bits (481), Expect = 1.479e-54 Identity = 111/294 (37.76%), Postives = 143/294 (48.64%), Query Frame = 0
Query: 62 AELVNGAADETASVPAWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMF 355
AEL + + + S WYT YWE E NCPP GVLGG+GH+S D+ GS RFL+ RV+ L P M + A DCG G+GRV K LLLP F +VD LE RLL PS+ + + ++R +GM QDFQP +G YD++W QW +GHL D D V F+ R +AAL P G + +K+N + A + VD DSSL RSP Y K+LF AG L E Q FP EL+PV+ +
Sbjct: 39 AELAD-VKESSTSTAGWYTSGAKYWEDENNCPPNDQGVLGGYGHISPVDVEGSSRFLD-RVQELRPGMGRQLAIDCGCGVGRVVKNLLLPRFDAVDCLEQCQRLLNTVPSY-----------------IGNASDTARIRNLYCMGM-------------------------------------------QDFQPEAG-TYDLIWCQWVLGHLTDSDFVEFMKRCQAALAP-NGVICIKENAINEGAPYYVDKDDSSLGRSPVYYKSLFRQAGLTLVAEAEQSDFPDELYPVVSY 268
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|698809322|ref|XP_009837690.1| (hypothetical protein H257_12239 [Aphanomyces astaci] >gi|574107391|gb|ETV72904.1| hypothetical protein H257_12239 [Aphanomyces astaci]) HSP 1 Score: 187.578 bits (475), Expect = 1.505e-53 Identity = 110/295 (37.29%), Postives = 142/295 (48.14%), Query Frame = 0
Query: 62 AELVNGAADETASVPA-WYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMF 355
AEL + +T + PA WYT YWE E NCPPT DGVLGG+G +S D+ GS FL+ R++ L P M+ A DCG G+GRV K LLLP + SVD LE S RLL PS+ + + ++R +GM QDFQP YD++W QW +GHL D D V FL R + AL P+ G + +K+N + + VD DSSL RS Y K++F AG L E Q FP EL+PVI +
Sbjct: 39 AELADAKGSDTTAAPAGWYTSGAKYWEDESNCPPTDDGVLGGYGRISPADVEGSASFLD-RIQTLRPTMKRNLAIDCGCGVGRVVKHLLLPRYDSVDCLEQSQRLLNTVPSY-----------------IGRSSDTSRIRNLYCMGM-------------------------------------------QDFQPEPH-AYDLIWCQWVLGHLTDSDFVAFLKRCQKALAPD-GVICIKENAINEGVPYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETEQSDFPDELYPVITY 270
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|695436677|ref|XP_009532028.1| (hypothetical protein PHYSODRAFT_562742 [Phytophthora sojae] >gi|348671875|gb|EGZ11695.1| hypothetical protein PHYSODRAFT_562742 [Phytophthora sojae]) HSP 1 Score: 185.652 bits (470), Expect = 4.208e-53 Identity = 108/281 (38.43%), Postives = 145/281 (51.60%), Query Frame = 0
Query: 77 AWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMFCF 357
WY A+ YW+ E NCP T +GVLGGF HVSG DI S+RFL+ P AADCGAGIGRV+KLLLLP+F VDL+E SPRLL P ++ E RA ++R+ +G+ +D +P PAS YD++W+QW + HL D+DLVR+L R K AL G +++K+N + + +D DSS+TRS Y K++F+ AG L E RQ+ FP EL+PV M+
Sbjct: 38 TWYASAHEYWDDEANCPLTDNGVLGGFAHVSGVDIRESKRFLKHVRDTARPEWICHAAADCGAGIGRVSKLLLLPMFEHVDLVEQSPRLLRGVPQYLGADETLRA----------------RVRDLYCMGL----------QDFEP-------------------------------APAS---YDLIWMQWVLVHLTDVDLVRYLKRCKQAL-THNGFMVIKENVFQTAEPYDLDRQDSSITRSAVYYKSIFQQAGLTLLAERRQRHFPEELYPVKMYAL 257
BLAST of EWM28718.1 vs. NCBI_GenBank
Match: gi|813225888|ref|XP_012212021.1| (hypothetical protein SPRG_17107 [Saprolegnia parasitica CBS 223.65] >gi|641521794|gb|KDO17272.1| hypothetical protein SPRG_17107 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 180.644 bits (457), Expect = 4.932e-51 Identity = 123/324 (37.96%), Postives = 163/324 (50.31%), Query Frame = 0
Query: 32 EYTSLSEMWATVGILEPSVALKAGATRKRVAELVNGAADETASVPAWYTQAYSYWEAEGNCPPTIDGVLGGFGHVSGTDIAGSRRFLEGRVKPLLPAMRLEKAADCGAGIGRVTKLLLLPIFASVDLLEPSPRLLAAAPSFMFGQEGHRAARMEAEVLLSEGGEEEKLREQAVVGMRGREEPYGKAEDADPRAGSLPTRQQQGMKAPPEARVRYLCLGMQDFQPASGVVYDVVWIQWCIGHLHDLDLVRFLVRIKAALRPETGAVIVKDNCCDASADFVVDTGDSSLTRSPAYLKALFEIAGYDLRVEERQQGFPAELFPVIMF 355
E++S+ +MW T ++A++ D+ AWYTQ YWE E NCPP + GVLGG+G++S DI GS FL RV+ L PA + ++A DCG GIGRV K LLLP+FASVDLLE SPRLL AAP ++ G E HR E LL G +D DP S YD++W QW HL DLD ++FL R + ALRP G + +K+N + + +D DSS+TRS AY K++F A L +ERQ+GFP EL+PV+ +
Sbjct: 29 EFSSVYDMWTT-----------------KLADI----KDDATKPAAWYTQGADYWEDEENCPPDVGGVLGGYGYISPIDIEGSTAFL-ARVQALRPAFKRDRAIDCGGGIGRVVKHLLLPLFASVDLLEQSPRLLKAAPRYI-GAEKHR-----VETLLCMG-----------------------MQDFDPSPNS----------------------------------YDLIWCQWVCPHLMDLDFIKFLQRCQQALRP-GGVICIKENIIVDGSPYELDEDDSSVTRSAAYYKSIFRQANLTLLADERQEGFPEELYPVMTY 266 The following BLAST results are available for this feature:
BLAST of EWM28718.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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