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Properties
| Property Name | Value |
|---|
| Product | translation machinery-associated protein 22 |
| Orig transcript id | gnl|cribi|Naga_100002g16.4788.mrna |
| Orig protein id | gnl|cribi|Naga_100002g16.4788 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:670951..672190 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2005 ID=rna2005|Name=rna2005|organism=Nannochloropsis gaditana|type=mRNA|length=3852bp
ATGGCCCACCGCGCCCGTGTCCTCCGAAGCCCCGCCCAGCAGACCATTCG
GATGCACTATGCAAATTGTAACACGTACAATGCGGACTTCGATGGCGACG
AAATGAATTGTCATTTTCCTCAAGACGAACTCTCCCGTGCCGAGGCGGAG
ACGATTGCCTGCACGGACGAGCAATACCTTGCGCCCACCAACGGCAAGCC
TCTCCGGGGTCTGATCCAGGACCATGTGGGCAGTGGAGTCAAGCTCACTG
GGAAGGACTGTTTTCTGTCACGGGCGGATTTTCAGCATATTCTTTTCTGT
ACACTTTCCGGGTTGCCAGGCGTGGAAGTCGTTCCCCCACACGGTCATAT
CTACATGCCTGCCCCCGCGATTTGGAAGCCCCAAGAACTATGGACTGGCA
AGCAAATGATCTCGGTCCTACTGCAGCACTTAAGTGAGGGTCTTCCTCCA
CTAAACCTGGACTTTAAGGCCAAAACGCCCGCCGTAGCTTTCGGCGTCGA
TCAGGAGGAGCACGAGGTAGTAGTGCGTGGCGGAGACTTGATCCGCGGAG
TACTAGACAAAGCGGCTTTTGGGGCCTCCGAGGGTGGTCTTGTGCACGGT
GTCTACGAGTTCTACGGTCCTCGTTTTGCCGGGCGGCTGCTTACAGCATT
AGGGCGCCTTTTCACAGTCTACTTGCAATTCGCCGGCCACACGTGCGGTG
TGGAGGATTTGGTTTTGAGCCGAGCGGCGGAGCAACGACGTCGCGCACTA
ATCACCCGTGCTGGTCGCTTAGGGGGTTTAGCCATGTATTGCTACACCTC
TGGTACGGCATTTGAGCCTCCGCCCTTGCCGCCGCTTCCCTCCGCCTCGG
CCCAAGCTGAGAAGGATGGGGCCTCGGCGGATGGCCTGAGCGCAGCCGAC
CTGGCCAGAGTACAAGCCCGCACTGCTGAGTTGTTGGAGGAAGATATGCG
CACGGGACAGGTCACTCAGGCAGCGGCCATTGACAATTTCATGCGAACAG
TCTTATCCCCGGTTTCAAGCGATATTATAAAGGCCTGTCTTCCGGATGGG
CTGACGAAGCCTTTCCCTCATAACGCATTTTCTCTGATGGTTTCCACGGG
TGCCAAGGGAAGTACGGTGAACCAGAGCCAAATCTCTTGCGGCCTTGGTC
AGCAGGAACTAGAGGGTCGGCGCGTGCCCTTGATGCCAAGTGGTAAATCC
CTCCCCTCCTTCCCTCCTTACGATCCGAGCCCACGGGCAGGCGGATTCAT
CGTGGACAGGTTTCTGACGGGCGTCCGACCGCAAGAGTACTATTTCCACT
GTATGGCAGGGCGGGAGGGTCTTATTGACACCGCGGTCAAGACTAGCCGC
TCTGGATACCTCCAGCGCTGCCTTGTGAAGGGCCTGGAGGAGCTGCGCGT
GCATTACGATAACACTGTAAGGGACGCGGACGCGGGCGTTGTGCAATTTC
TTTATGGGGAGGATGGCGTAGACCCCTTGCACGGCAAGTACCTGGATGGA
CAAGCCCCGCAAATGACCGCTTTGGCCAGAAACTTTGCGGCTTTGTTATG
CCAGTACAAAGTAGACCTGAAGTTCTTGGAACGCACCGGTATGGATTTAA
AGACAGCCCGCGCTATGCATGAAGAAATCAAGGCAGCGCGATTGGAAATC
AAAGAGCAGGCACAGAAAAGAGAGCAGAAAAGTTTAAGTGCCGTGAGGCC
TGCACAATTGAAGGTAGGCAACATGGTGTTGACCAAACGTCTGAAGCGAA
CGAGGACAGAGTGGATCACGGGGGCCTGGCTGCCTGGTTGGGAGCCCGCC
GAGGTGGTGAAGGTGCACGGTGCCAAGGGGGCGAGTCGCCCTGCCACTTA
CGACCTAAGGTATATTTCGGATGGTAAGGTGGCCAAGCGGGTCCCGCGGC
GCATTCGACACACTGTCGTGGAGCCCTCTCGCCCAGCCGCCTCCGCTCTC
GACATTCCCCCCCCTCCTCCCTCCTCATCCGCTTCGCAAGTGGATTTAAT
CCGGTGGCCCTATCTTCCTGACCCGGTGCTGGGACGAGCCAAGACGCAGT
TGGGTCTCCATTTGGGAGCTATCAGCGAACGGTTTCAAGATGCGATTGAG
GACTACCTAGGCCGCGATCCCGAGCACCTTTTCCAAAAATCAGAGATGGG
GGGCTCAAAGAGCAAGGCTGGTCTAGAGTTGTTACTTTGGCTCAAGTACA
TGCGCAGCTTGACGTCTCCGGGGGAGGCAGTGGGCTCCATCGCGGGACAG
TCGATCGGAGAGCCTTCCACCCAAATGACTCTGAACACCTTCCACTTGGC
CGGGCACGGTGGCGCAAACGTCACATTGGGCATTCCCCGGCTCCGCGAAA
TCATTATGACCGCCAGTCGGAACCCGAAGACCCCCTCTATGACCGTCTCG
CTCTGTACTTCGATCTCACGCTCCGAGGCTCAGCGCCTCTCAGCCCGCCT
GCGGCGCCTGCAGCTGCTCGAGGTTGTCCACCACACACAGGGCAGTGTCC
TGGTCAAAGAGCGGCTAGGGAGGTGTGCCAGTAGTGGGGTGACCTGGCAA
CGCTACTACACGGTGTCCCTCCGGCTGCACGACGAGGAGGTGCTTCAGGA
GGCGTTTGGGTTGAGCCACGAGGAGATGTTCGAGGTGATTGCCACGCGCT
TTGTGAGGCAGCTGCTGGCCTCTGTCACGGCGGAACTGCGGAAGGTTGCC
AGCCGAGATGTCGTGAGACTCCTCAAGGAGCGTCGTGGGAATGCAGCAGA
CGCGGAGGCTCGAGAGTCGGGAGAGGCGAGCGAAGACGAAGCGGACATGA
CAGGCCTCATTGGCGGGAGGGGCCCGGGGATGAAGGCGGCAGCCAGGGCA
GGCGCAAAGACAAGCCCCAAGCTTGCTGCAATGGATGTCGATGGGGAAGA
AGATGAAGAAAGAGAGGAAGAGGAGGACGGCGACGAGGCTCAGGGCACTC
TGAGCTTCGGACGAAAGGAGGAGCGTGGCGAGTACGAGCCGGACGAGGAG
GAGGACCCGAGCGAGGTTGTCGGGGACGATGCTTCAGGGATCGAAGAGGG
GGTTGAGAATTCAGGCGAAGGGCAACTATCTGAAGTGCCCGCAAAGCAAC
GGCGAAGTGGCAGCAGGTTTGACGATGTCGCCGCTGTCGCCAAGATTGAT
CATCCTTTCTTCGAGAACTTACGCTTTGAACGTGAAACCGGTGTGGCCCA
TATCACACTCAAGACCCGTGCCTCTCACCGCCGGTTATTAATGGTCAGTA
TAGTTGAGGCAGCAGCTGAGCGATGCACGGTGCATGTCTCTAAAGGTATT
GCGCAAGCTTTTGTAGTGGAGGGAAAAGACGGGCGATGCAGTATCCAGAC
AGAGGGATGCAATCTGTCCGAGTTGTGGGAGGTCGGTGACGCAGCACTGG
ATCTAAACAACATAACTAGCAATGACATTTGGGCCATGCATCAGACGTAC
GGCGTGGAGGCGGCTCGGGCCACAATTGTGAAGGAGATAAAAGGTGTTTT
TGGGGCTTACGGTATCGCTGTGGACCCTCGACACTTGGGTTTGGTTGCAG
ACTTCATGACTTATCAAGGTGGCTTCCGCGCTTTGAACCGTATTGGTATG
TCCGAGGTCTCATCGCCATTTTTGCAAATGAGCTTCGAGACTACTGCCAC
CTTCCTCACAGAGGCCGCGCTCAACTCTGAGAAAGATGATTTGCAAACTC
CATCGGCGAAGTTGGTCATGGGCCAGCCTACGGGGAATGGTACAGGGTCG
TTTGACATTATGATTCCTGTTGATATGAATAGGAAAGCCAGCGAGAGCTA
CGTCGAAGATCCTCTGAAGGAAGAGGAAGGAGATAGGATGGAGGAGGCTT
AG back to topprotein sequence of rna2005 >rna2005-protein ID=rna2005-protein|Name=rna2005|organism=Nannochloropsis gaditana|type=polypeptide|length=246bp
MLVYVPYAIFSFAVCSIPPEYCIFNPPDLYADCLRWQAKCHTELLPEGAS
VDDMLAKLNLHNSGSGGKINSSGDGRAGANAAAGEGESTGEGEEDDGNGR
EEDECGKKKKGGPKGIKKKETASGGKVLIMRMSRNKRKSITVVTGLDSYP
DLKLKDVAKALGKAFASGASVSDTGSGGKEIVIQGDVIDSLAIMLEEKYK
VGTRDKYNDQIIKHVVHKECQETKRKHRWRTPCVPAFTRQSVKPEV back to topmRNA from alignment at CM002458.1:670951..672190+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2005 ID=rna2005|Name=rna2005|organism=Nannochloropsis gaditana|type=mRNA|length=1240bp|location=Sequence derived from alignment at CM002458.1:670951..672190+ (Nannochloropsis gaditana)
ATGCTTGTGTATGTTCCTTACGCCATTTTCTCTTTCGCAGTTTGCAGTAT
TCCGCCAGAGTATTGCATCTTTAACCCCCCTGATTTGTACGCCGATTGCC
TGAGATGGCAAGCGAAGTGCCACACGGAGCTTTTACCTGAGGTAATTATA
TGCGACAAATTAAGGCTATACAAGAATGCCTGGTTGCCCAATTGAGACGT
TTTTCTCATCGAACTAGACTACTCTTCTCTATGTTCACTCTGTAGGGTGC
ATCGGTCGACGACATGCTGGCAAAGCTTAATCTGCACAATTCCggaagtg
gagggaaaaTTAACAGCAGTGGTGATGGTCGAGCAGGTGCcaatgcagca
gcaggcgaaggagagagcaCAGGCGAGGGTGAAGAGGTGAGattgaaaag
aaagcaagatTGTTTTGCAGCTCATTTCCAATCTATTCATTTTCGTCACA
CAGGATGACGGAAacggaagagaagaagacggTGAGATGGCAGAGACGCA
TCTCTATGAAACATAGGGGGACGATGTGTGGGTTGCCCTGACTTCTGACG
ACAAATTTATTCCTTGCTTTTCAACAGAATGcggcaaaaagaagaaagga
gggcctAAAGGGAttaagaagaaggagacggcatCAGGGGGCAAGGTCCT
CATCATGCGCATGTCTCGGAATAAGCGCAAGTCAATCACAGTGGTCACAG
GCCTCGATTCCTATCCAGGTGAAGACTCGTGGAATTCTGGAAACCGATTT
CTCTCTCAGTGAAGCTCCCTTGACTGTACGGCCGCTCGTGATATGATTGT
GAGTGCATTTCAGATGTGCTGTGTGTGCTGCCTGTCACCCTTCGTCCTCA
TAAACCGCACTTACTTTTTACCCAGATTTGAAGCTCAaggacgtggccaa
ggcgtTGGGAAAGGCCTTTGCGTCCGGAGCATCTGTTTCGGATACCggca
gcggagggaaggaaattgTAATTCAGGGCGACGTCATTGACAGCCTGGCG
ATAATGCTTGAGGAAAAGTATAAGGTAGGTAGCAAGGTTGGCAAAATCTT
CAAATACAACCAAAGAATGTGACACGAAATTCCTTGTCCTTTTTTCTGTA
AAGGTACCCGCGACAAATATAATGATCAAATCATAAAGCACGTCGTCCAC
AAGGAATGTcaggagacgaagagaaaACATCGATGGCGCACGCCTTGTGT
TCCAGCGTTCACCAGACAAAGCGTCAAGCCTGAAGTTTAA back to topCoding sequence (CDS) from alignment at CM002458.1:670951..672190+ >rna2005 ID=rna2005|Name=rna2005|organism=Nannochloropsis gaditana|type=CDS|length=4446bp|location=Sequence derived from alignment at CM002458.1:670951..672190+ (Nannochloropsis gaditana)
ATGCTTGTGTATGTTCCTTACGCCATTTTCTCTTTCGCAGTTTGCAGTAT
TCCGCCAGAGTATTGCATCTTTAACCCCCCTGATTTGTACGCCGATTGCC
TGAGATGGCAAGCGAAGTGCCACACGGAGCTTTTACCTGAGGGTGCATCG
GTCGACGACATGCTGGCAAAGCTTAATCTGCACAATTCCggaagtggagg
gaaaaTTAACAGCAGTGGTGATGGTCGAGCAGGTGCcaatgcagcagcag
gcgaaggagagagcaCAGGCGAGGGTGAAGAGGATGACGGAAacggaaga
gaagaagacgAATGcggcaaaaagaagaaaggagggcctAAAGGGAttaa
gaagaaggagacggcatCAGGGGGCAAGGTCCTCATCATGCGCATGTCTC
GGAATAAGCGCAAGTCAATCACAGTGGTCACAGGCCTCGATTCCTATCCA
GATTTGAAGCTCAaggacgtggccaaggcgtTGGGAAAGGCCTTTGCGTC
CGGAGCATCTGTTTCGGATACCggcagcggagggaaggaaattgTAATTC
AGGGCGACGTCATTGACAGCCTGGCGATAATGCTTGAGGAAAAGTATAAG
GTAGGTACCCGCGACAAATATAATGATCAAATCATAAAGCACGTCGTCCA
CAAGGAATGTcaggagacgaagagaaaACATCGATGGCGCACGCCTTGTG
TTCCAGCGTTCACCAGACAAAGCGTCAAGCCTGAAGTTTAAATGCTTGTG
TATGTTCCTTACGCCATTTTCTCTTTCGCAGTTTGCAGTATTCCGCCAGA
GTATTGCATCTTTAACCCCCCTGATTTGTACGCCGATTGCCTGAGATGGC
AAGCGAAGTGCCACACGGAGCTTTTACCTGAGGGTGCATCGGTCGACGAC
ATGCTGGCAAAGCTTAATCTGCACAATTCCggaagtggagggaaaaTTAA
CAGCAGTGGTGATGGTCGAGCAGGTGCcaatgcagcagcaggcgaaggag
agagcaCAGGCGAGGGTGAAGAGGATGACGGAAacggaagagaagaagac
gAATGcggcaaaaagaagaaaggagggcctAAAGGGAttaagaagaagga
gacggcatCAGGGGGCAAGGTCCTCATCATGCGCATGTCTCGGAATAAGC
GCAAGTCAATCACAGTGGTCACAGGCCTCGATTCCTATCCAGATTTGAAG
CTCAaggacgtggccaaggcgtTGGGAAAGGCCTTTGCGTCCGGAGCATC
TGTTTCGGATACCggcagcggagggaaggaaattgTAATTCAGGGCGACG
TCATTGACAGCCTGGCGATAATGCTTGAGGAAAAGTATAAGGTAGGTACC
CGCGACAAATATAATGATCAAATCATAAAGCACGTCGTCCACAAGGAATG
TcaggagacgaagagaaaACATCGATGGCGCACGCCTTGTGTTCCAGCGT
TCACCAGACAAAGCGTCAAGCCTGAAGTTTAAATGCTTGTGTATGTTCCT
TACGCCATTTTCTCTTTCGCAGTTTGCAGTATTCCGCCAGAGTATTGCAT
CTTTAACCCCCCTGATTTGTACGCCGATTGCCTGAGATGGCAAGCGAAGT
GCCACACGGAGCTTTTACCTGAGGGTGCATCGGTCGACGACATGCTGGCA
AAGCTTAATCTGCACAATTCCggaagtggagggaaaaTTAACAGCAGTGG
TGATGGTCGAGCAGGTGCcaatgcagcagcaggcgaaggagagagcaCAG
GCGAGGGTGAAGAGGATGACGGAAacggaagagaagaagacgAATGcggc
aaaaagaagaaaggagggcctAAAGGGAttaagaagaaggagacggcatC
AGGGGGCAAGGTCCTCATCATGCGCATGTCTCGGAATAAGCGCAAGTCAA
TCACAGTGGTCACAGGCCTCGATTCCTATCCAGATTTGAAGCTCAaggac
gtggccaaggcgtTGGGAAAGGCCTTTGCGTCCGGAGCATCTGTTTCGGA
TACCggcagcggagggaaggaaattgTAATTCAGGGCGACGTCATTGACA
GCCTGGCGATAATGCTTGAGGAAAAGTATAAGGTAGGTACCCGCGACAAA
TATAATGATCAAATCATAAAGCACGTCGTCCACAAGGAATGTcaggagac
gaagagaaaACATCGATGGCGCACGCCTTGTGTTCCAGCGTTCACCAGAC
AAAGCGTCAAGCCTGAAGTTTAAATGCTTGTGTATGTTCCTTACGCCATT
TTCTCTTTCGCAGTTTGCAGTATTCCGCCAGAGTATTGCATCTTTAACCC
CCCTGATTTGTACGCCGATTGCCTGAGATGGCAAGCGAAGTGCCACACGG
AGCTTTTACCTGAGGGTGCATCGGTCGACGACATGCTGGCAAAGCTTAAT
CTGCACAATTCCggaagtggagggaaaaTTAACAGCAGTGGTGATGGTCG
AGCAGGTGCcaatgcagcagcaggcgaaggagagagcaCAGGCGAGGGTG
AAGAGGATGACGGAAacggaagagaagaagacgAATGcggcaaaaagaag
aaaggagggcctAAAGGGAttaagaagaaggagacggcatCAGGGGGCAA
GGTCCTCATCATGCGCATGTCTCGGAATAAGCGCAAGTCAATCACAGTGG
TCACAGGCCTCGATTCCTATCCAGATTTGAAGCTCAaggacgtggccaag
gcgtTGGGAAAGGCCTTTGCGTCCGGAGCATCTGTTTCGGATACCggcag
cggagggaaggaaattgTAATTCAGGGCGACGTCATTGACAGCCTGGCGA
TAATGCTTGAGGAAAAGTATAAGGTAGGTACCCGCGACAAATATAATGAT
CAAATCATAAAGCACGTCGTCCACAAGGAATGTcaggagacgaagagaaa
ACATCGATGGCGCACGCCTTGTGTTCCAGCGTTCACCAGACAAAGCGTCA
AGCCTGAAGTTTAAATGCTTGTGTATGTTCCTTACGCCATTTTCTCTTTC
GCAGTTTGCAGTATTCCGCCAGAGTATTGCATCTTTAACCCCCCTGATTT
GTACGCCGATTGCCTGAGATGGCAAGCGAAGTGCCACACGGAGCTTTTAC
CTGAGGGTGCATCGGTCGACGACATGCTGGCAAAGCTTAATCTGCACAAT
TCCggaagtggagggaaaaTTAACAGCAGTGGTGATGGTCGAGCAGGTGC
caatgcagcagcaggcgaaggagagagcaCAGGCGAGGGTGAAGAGGATG
ACGGAAacggaagagaagaagacgAATGcggcaaaaagaagaaaggaggg
cctAAAGGGAttaagaagaaggagacggcatCAGGGGGCAAGGTCCTCAT
CATGCGCATGTCTCGGAATAAGCGCAAGTCAATCACAGTGGTCACAGGCC
TCGATTCCTATCCAGATTTGAAGCTCAaggacgtggccaaggcgtTGGGA
AAGGCCTTTGCGTCCGGAGCATCTGTTTCGGATACCggcagcggagggaa
ggaaattgTAATTCAGGGCGACGTCATTGACAGCCTGGCGATAATGCTTG
AGGAAAAGTATAAGGTAGGTACCCGCGACAAATATAATGATCAAATCATA
AAGCACGTCGTCCACAAGGAATGTcaggagacgaagagaaaACATCGATG
GCGCACGCCTTGTGTTCCAGCGTTCACCAGACAAAGCGTCAAGCCTGAAG
TTTAAATGCTTGTGTATGTTCCTTACGCCATTTTCTCTTTCGCAGTTTGC
AGTATTCCGCCAGAGTATTGCATCTTTAACCCCCCTGATTTGTACGCCGA
TTGCCTGAGATGGCAAGCGAAGTGCCACACGGAGCTTTTACCTGAGGGTG
CATCGGTCGACGACATGCTGGCAAAGCTTAATCTGCACAATTCCggaagt
ggagggaaaaTTAACAGCAGTGGTGATGGTCGAGCAGGTGCcaatgcagc
agcaggcgaaggagagagcaCAGGCGAGGGTGAAGAGGATGACGGAAacg
gaagagaagaagacgAATGcggcaaaaagaagaaaggagggcctAAAGGG
AttaagaagaaggagacggcatCAGGGGGCAAGGTCCTCATCATGCGCAT
GTCTCGGAATAAGCGCAAGTCAATCACAGTGGTCACAGGCCTCGATTCCT
ATCCAGATTTGAAGCTCAaggacgtggccaaggcgtTGGGAAAGGCCTTT
GCGTCCGGAGCATCTGTTTCGGATACCggcagcggagggaaggaaattgT
AATTCAGGGCGACGTCATTGACAGCCTGGCGATAATGCTTGAGGAAAAGT
ATAAGGTAGGTACCCGCGACAAATATAATGATCAAATCATAAAGCACGTC
GTCCACAAGGAATGTcaggagacgaagagaaaACATCGATGGCGCACGCC
TTGTGTTCCAGCGTTCACCAGACAAAGCGTCAAGCCTGAAGTTTAA back to top
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